mRNA_H-canaliculatus_M_contigs9775.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs9775.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ52_ECTSI) HSP 1 Score: 353 bits (907), Expect = 1.170e-117 Identity = 182/227 (80.18%), Postives = 193/227 (85.02%), Query Frame = 1
Query: 1 RYVARPMLWRGRKFHFRAYALLHADMSAWLYRTAYILSASRPYSLKGVGASGDAGR-GAGLAD--------ELVHISNLAVNKHTDGHPGQVPCDLPKEYPALWPRMLELLRSLVQAATPFMQHQANLNNFEFLGLDIIADSLGGVWLMEVNRLPGLQSSKQNLEEENAVYDGMMLDVIRLLVLPRLTSCTPEEGRFEAATAPAPSSRAPSTETWRNVMRFAAFKRS 654
RYVARPMLW+GRKFHFRAYALL ADMSAWLYRTAYILSASRPYSL G + D R GAG+AD E VHISNLAVNKHT+GHPGQVPCDLP EY ALWP+MLELL SLV AATPFMQHQAN N+FEFLGLDIIADS GGVWLME NRLPGLQSSKQNLE+EN VYDGMMLD+IRLLVLP LT C+PE+G FE A PA +RAPSTETWRNVMRFAAFKRS
Sbjct: 278 RYVARPMLWQGRKFHFRAYALLRADMSAWLYRTAYILSASRPYSLGGNDSRDDGVRVGAGVADMHRAAFADEFVHISNLAVNKHTEGHPGQVPCDLPSEYGALWPKMLELLGSLVDAATPFMQHQANPNHFEFLGLDIIADSAGGVWLMEANRLPGLQSSKQNLEKENEVYDGMMLDLIRLLVLPPLTGCSPEQGLFEVAATPASGARAPSTETWRNVMRFAAFKRS 504
BLAST of mRNA_H-canaliculatus_M_contigs9775.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVN0_9STRA) HSP 1 Score: 179 bits (453), Expect = 1.330e-51 Identity = 109/237 (45.99%), Postives = 140/237 (59.07%), Query Frame = 1
Query: 4 YVARPMLWRGRKFHFRAYALLHADMSAWLYRTAYILSASRPYSLKGVGASGDAGRGAGLADELVHISNLAVNKHTDGHPGQVPCDLPKEYPALWPRMLELLRSLVQAATPFMQHQANLNNFEFLGLDIIADS-LGGVWLMEVNRLPGLQSSKQNLEEENAVYDGMMLDVIRLLVLPRLTSCTPE-EGRFEAATAPAPSSRAPSTET---------WRNVMRFAAFKRSAHRAKKLSS 681
YVARP+L+ GRKFHFR YALL A M + Y AYIL+A+ Y L+ G D + HISN+AVNKH G+PGQVP LP +YP L+ RM EL +++ A+PF+ Q +L++FEFLGLDI+AD+ VWL+EVNRLPGLQSSK N EE+ Y+ MM + +LV P L E G E P + T T W+NV++FA F KK+SS
Sbjct: 103 YVARPLLFHGRKFHFRCYALLAASMQGFFYDRAYILAATNQYRLEQPG------------DAMTHISNMAVNKHMAGYPGQVPTHLPTDYPQLFERMKELYSEVIRVASPFLAVQRSLSHFEFLGLDIMADADASRVWLLEVNRLPGLQSSKSNQAEEDVTYNTMMSAAMEMLVYPVLKLQPGEPRGPVEPKGGWCPVNEECPTPTQIVEDHQQGWKNVLKFAMF------TKKVSS 321
BLAST of mRNA_H-canaliculatus_M_contigs9775.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y052_HETAK) HSP 1 Score: 145 bits (367), Expect = 2.650e-40 Identity = 85/197 (43.15%), Postives = 115/197 (58.38%), Query Frame = 1
Query: 76 MSAWLYRTAYILSASRPYSLKGVGASGDAGRGAGLADELVHISNLAVNKHTDGHPGQVPCDLPKEYPALWPRMLELLRSLVQAATPFMQHQANLNNFEFLGLDIIADSLGGV-WLMEVNRLPGLQSSKQNLEEENAVYDGMMLDVIRLLVLPRLTSCTPEEGR--FEAATAPAPSSRAPSTETWRNVMRFAAFKRSA 657
+ + Y AYIL+A RPY L GA +D+L HISN+AVNKH G+PGQ+PC +P E+PALW M E+ LV+AA PF+Q QAN +FEF GLD +AD+ G WL+EVNRLPGLQ+S N E+ +Y+ M+ D++ L+ + P EG ++ P TW+N F AF + A
Sbjct: 7 LQPYFYEMAYILTAMRPYRL---GAP---------SDDLRHISNMAVNKHEAGYPGQIPCRVPVEFPALWASMTEVWAELVRAAAPFLQVQANARHFEFYGLDFLADADGETAWLLEVNRLPGLQASAANKAAEDQMYNKMIADLLELIGVS-----LPLEGTNLWQPTAQPEEEVEVNPKMTWKNTFNFKAFVKRA 186
BLAST of mRNA_H-canaliculatus_M_contigs9775.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RWA3_9ARCH) HSP 1 Score: 147 bits (370), Expect = 2.800e-38 Identity = 76/190 (40.00%), Postives = 122/190 (64.21%), Query Frame = 1
Query: 7 VARPMLWRGRKFHFRAYALLHADMSAWLYRTAYILSASRPYSLKGVGASGDAGRGAGLADEL-VHISNLAVNKHTDGHPGQVPCDLPKEYPALWPRMLELLRSLVQAATPFMQHQANLNNFEFLGLDIIAD------------SLGGVWLMEVNRLPGLQSSKQNLEEENAVYDGMMLDVIRLLVLPRLT 537
V RP+L++GRKFHFR YALL DM+A+L+R +IL++S PY+ S + A L +H++NL++NK GHPGQ+PC+LP +YP ++ R+ L +VQAA P+++ Q + +F+F GLD++ ++ V ++E+NRLPGL+SS N + E+A+YD MM +R+++ P ++
Sbjct: 179 VPRPLLYQGRKFHFRCYALLMGDMAAYLHRHCFILTSSLPYNPLEPCTSSEQ-----YASRLRMHVTNLSINKKFTGHPGQIPCNLPADYPDVFLRLSSLWAEIVQAARPYLRCQRSRRHFDFYGLDVVCSRPSSAHHNDDSGAVSEVHVIELNRLPGLESSALNTQAEDALYDEMMRQALRIVLAPEIS 363
BLAST of mRNA_H-canaliculatus_M_contigs9775.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2B8_9STRA) HSP 1 Score: 124 bits (311), Expect = 3.300e-29 Identity = 81/235 (34.47%), Postives = 111/235 (47.23%), Query Frame = 1
Query: 1 RYVARPMLWR---GRKFHFRAYALLHADMSAWLYRTAYILSASRPYSLKGVGASGDAGRGAGLADELVHISNLAVNKHTDGHPG----------------------------QVPCDLPKEYPALWPRMLELLRSLVQAATPFMQHQANLNNFEFLGLDIIADSLG--------------------------GVWLMEVNRLPGLQSSKQNLEEENAVYDGMMLDVIRLLVLPRL 534
RYVARP+L G K HFR + +L D+SAWL+ A +L A PY+L DAG + +H++NLA +K G Q CDLP+E+PALWPRML + AA P M+HQA+ +F GLD +AD+ G GVWL+E NR+PGL S+++N E+ A Y + D++ L VLP +
Sbjct: 240 RYVARPLLLPRCGGAKSHFRCFGVLRGDLSAWLHAGACVLRARAPYALS------DAG------NPSIHLTNLAFSKRPGGXXXXXXXXXXXXXXXXXXXXXXXXXAQRFRPQTACDLPREHPALWPRMLAAWGAAAAAAAPLMRHQASAAHFALFGLDFLADAGGELSXXXXXXXXXXXXXXXXXXXXXXXGVWLLEANRVPGLASTRENWAEDEAFYGALTRDLLDLAVLPHV 462
BLAST of mRNA_H-canaliculatus_M_contigs9775.1.1 vs.
Match: Tubulin-tyrsoine (ligase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQE7_9STRA) HSP 1 Score: 114 bits (284), Expect = 8.570e-26 Identity = 74/211 (35.07%), Postives = 110/211 (52.13%), Query Frame = 1
Query: 1 RYVARPMLWRGR-KFHFRAYALLH------------------ADMSAWLYRTAYILSASRPYSLKGVGASGDAGRGAGLADELVHISNLAVNKHTDGHPGQVPCDLPKEYPALWPRMLELLRSLVQAATPFMQHQANLNNFEFLGLDIIA-------------DSLGGVWLMEVNRLPGLQSSKQNLEEENAVYDGMMLDVIRLLVLPRLT 537
RY+ RP+L + KFH+R YALL A W+Y+ +IL AS Y S A D H++NL++NKH G+PGQ+P DL + P + M ++V+AA PF++ QA+ +FE GLD + D ++LME+NRLPGLQSS+QN +E+ +YD M+ +++ L V+P L+
Sbjct: 201 RYITRPLLLEKKYKFHYRVYALLRMTGVEETGRTSVDREARRARFQPWIYQHGFILRASERYHHATKCGS------ANEIDAAAHLTNLSLNKHCPGYPGQLPIDLARA-PRTFGCMKAHWAAVVRAAAPFLRAQASSGHFELFGLDYLPVEAACAPEDMMHLDKFDSMYLMEINRLPGLQSSRQNSADEDELYDCMIRELLDLCVMPFLS 404
BLAST of mRNA_H-canaliculatus_M_contigs9775.1.1 vs.
Match: ADP,ATP (carrier protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DE03_9STRA) HSP 1 Score: 105 bits (262), Expect = 1.920e-22 Identity = 70/195 (35.90%), Postives = 98/195 (50.26%), Query Frame = 1
Query: 1 RYVARPMLWRGR-KFHFRAYALLH------------------ADMSAWLYRTAYILSASRPYSLKGVGASGDAGRGAGLADELVHISNLAVNKHTDGHPGQVPCDLPKEYPALWPRMLELLRSLVQAATPFMQHQANLNNFEFLGLDIIA-------------DSLGGVWLMEVNRLPGLQSSKQNLEEENAVYD 489
RY+ RP+L + KFH+R YALL A WLY+ +IL AS Y S A D H++NL++NKH G+PGQ+P DL + P + M ++V+AA PF++ QA+ +FE GLD + D ++LME+NRLPGLQSS QN +E+ +YD
Sbjct: 75 RYITRPLLLEKKYKFHYRVYALLRMTGVEETGHTSVDGEARRARFQPWLYQHGFILRASERYHHATKCGS------ANEIDAAAHLTNLSLNKHCPGYPGQLPIDLARA-PRTFGCMKAHWAAVVRAAAPFLRAQASSGHFELFGLDFLPVEPARAPEDMMRLDEFDSMYLMEINRLPGLQSSPQNSADEDGLYD 262
BLAST of mRNA_H-canaliculatus_M_contigs9775.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JRS2_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 9.800e-15 Identity = 65/251 (25.90%), Postives = 111/251 (44.22%), Query Frame = 1
Query: 1 RYVARPMLWRGRKFHFRAYALLHADMSAWLYRTAYILSASRPYSLKGVGASGDAGRGAGLADELVHISNLAVNKH-TDGHPGQVPCDLPKEYPAL-------WPRMLELLRSLVQAATPFMQHQANLNNFEFLGLDIIADSLGG--------------VWLMEVNRLPGLQSSKQNLEEENAVYDGMMLDVIRLLVLPRLTSCTPEEGR-------FEAATAPAPSSRAPSTETWRNVMRFAAFKRSAHRA 666
+Y P+LW GRKFH R YA+L AD A+++R A++ A+ + + ++ VHI+N N + G++ D A +P + E R +V +A PF++ FE++GLD I S +L+E+N P Q + L+ +++ ++ D+++L +LP+ E F + + A SS PS T+ N MR+ F++ RA
Sbjct: 210 KYAFPPLLWHGRKFHVRVYAVLTADGQAYIHRRAFLHVANEMFDARACNTE---------TEDRVHITNCCANSDDVEKFAGEICIDFEDSADATSVIIASYFPSIQEAFRDVVSSAWPFVKGGEVNGGFEYMGLDFILSSTKDPAYASAECMKSNPVAYLLEINAPPS-QDTATGLDHAEGLHNEVLSDLVKLWILPKADDNFQSELGGWRRVLDFHSTSTVAASSSLPSKRTFLNQMRWVTFEQKTARA 450
BLAST of mRNA_H-canaliculatus_M_contigs9775.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XEB2_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 1.190e-12 Identity = 32/65 (49.23%), Postives = 45/65 (69.23%), Query Frame = 1
Query: 334 FMQHQANLNNFEFLGLDIIADSLGGVWLMEVNRLPGLQSSKQNLEEENAVYDGMMLDVIRLLVLP 528
FM++Q NLN+FEF G+DII D WL+E NRLPGL+SS N E+ +YD MM ++ +++ P
Sbjct: 2 FMKYQINLNHFEFFGIDIIVDEFDQCWLIEANRLPGLESSNNNKVIEDEMYDTMMSSLLDIILEP 66
BLAST of mRNA_H-canaliculatus_M_contigs9775.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JK46_9EUKA) HSP 1 Score: 70.9 bits (172), Expect = 4.010e-11 Identity = 63/204 (30.88%), Postives = 86/204 (42.16%), Query Frame = 1
Query: 4 YVARPMLWRGRKFHFRAYALLHADMSAWLYRTAYILSASRPYSLKGVGASGDAGRGAGLADELVHISNLAVNKHTDGHPGQVPCDLPK---------EYPALWPR-MLELLRSLVQAATPFMQ-------HQANLNNFEFLGLDIIADSLGGVWLMEVNRLPGLQSSKQNLEEENAVYDGMMLDVIRLLVLPRLTSCTPEEGRF 564
YVA PML GRKF R Y LL D SA+ Y A + AS Y L AD HI+N V T C L + +Y + R ++ LL+ LV + +P + ++ +FE D+I LMEVN P + E + + M D+++LLVLP T C+P GRF
Sbjct: 9 YVASPMLLGGRKFEMRQYLLLRGDGSAYTYERALLRLASVQYELSS-------------ADRRAHITNKWVQ--TKWGTSNELCTLEQIEMVSTEWAQYGEVLGRSIVPLLQDLVDSLSPLLAAGRARVPQSSSPFHFELFACDLIVSDQAQAKLMEVNINPAFGTFTAATRER--LIEPMFADLVKLLVLPAATGCSPRPGRF 195 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs9775.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs9775.1.1 >prot_H-canaliculatus_M_contigs9775.1.1 ID=prot_H-canaliculatus_M_contigs9775.1.1|Name=mRNA_H-canaliculatus_M_contigs9775.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=222bp MLWRGRKFHFRAYALLHADMSAWLYRTAYILSASRPYSLKGVGASGDAGRback to top mRNA from alignment at H-canaliculatus_M_contigs9775:339..2476+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs9775.1.1 ID=mRNA_H-canaliculatus_M_contigs9775.1.1|Name=mRNA_H-canaliculatus_M_contigs9775.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=2138bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9775:339..2476+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs9775:339..2476+ >mRNA_H-canaliculatus_M_contigs9775.1.1 ID=mRNA_H-canaliculatus_M_contigs9775.1.1|Name=mRNA_H-canaliculatus_M_contigs9775.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=666bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9775:339..2476+ (Hapterophycus canaliculatus Oshoro7m male)back to top |