mRNA_H-canaliculatus_M_contigs976.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs976.1.1
Unique NamemRNA_H-canaliculatus_M_contigs976.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs976.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN78_9PHAE)

HSP 1 Score: 657 bits (1696), Expect = 1.130e-231
Identity = 442/564 (78.37%), Postives = 456/564 (80.85%), Query Frame = 1 
Query:    1 MGDDQQYQDEGRSTAKTLWLGDVQPDWTEEYVESLFSSIAGQELEVKLIRDRHRGIVAGYGFIDFRNHETAQLVLDSLNGKPIEGTSLRYRLNWGAGGKRIEQAPEFSVFVGDLSPEVTDAELKATFLEKYSSVLGAKVVTNPMTGSSKSFGFIRFGDEKERDEALTAMNGAECCGRPIRVAPATKRTSVQGQTGAHATDPSNTTVFVGGINDSVTEKVLRETFSCAGEIHTVTTPPGRGCAFVTFAHRSSAEHVINNMQGTTVCGSCVRLSWGKSGRADRDRERERAG-EPLGGMGGMGXGIQSXXXXXXXXXXXXXXXXRGTQYSGLYGHPQSYASYNGAYPANLFPAGAVYGGAYPPQTGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQYAQQPYSXXSYA-------PYQGFGFQQYPTQQQAGGYTSFTGTNAAYAVRSGDPSALAADLSQLSLSGGSSS-VGXXXXXXXXXXXXXXXXXXXXXXX-------------GHGQGQGA--------------SFSLQDVRKGGVGLGPASRN 1584
            M DDQQYQDE RS AKTLWLGDVQPDWTEEYVESLFS I G+ELEVKLIRDRHRGIVAGYGFIDFRNHETAQLVLDSLNGKPIEGTSLRYRLNWGAGGKRIEQAPE+SVFVGDLSPEVTDAELKATFL+KY+SVLGAKVVTNPMTGSSKSFGFIRFGDE+ERDEALTAMNGAECCGRPIRVAPATKRTSVQGQTGAHATDPSNTTVFVGGINDSVTEKVLRETF+ AGEI TVTTPPGRGCAFVTFAHR+SAEHVINNMQGTTVCGSCVRLSWGKSGRADRDRERERAG +P+ GMGG    IQS    XXXXXXXXX   RG  +SGLYGHPQSYAS+NGAYPAN+FPAGAVYGGAYP Q GQ                    XXXXXXXXXXXXXXXXXXXXXXXXX        XX          PYQGFGFQQYP QQQA  YTSF G NAAYA    DPSALA DLSQLSLSGG++S VGXXXXXXXXXXXXXXXXXXXXXXX             G     G               SFSLQDVRKGG  LGPASRN
Sbjct:    1 MADDQQYQDENRSAAKTLWLGDVQPDWTEEYVESLFSGIVGKELEVKLIRDRHRGIVAGYGFIDFRNHETAQLVLDSLNGKPIEGTSLRYRLNWGAGGKRIEQAPEYSVFVGDLSPEVTDAELKATFLDKYASVLGAKVVTNPMTGSSKSFGFIRFGDEQERDEALTAMNGAECCGRPIRVAPATKRTSVQGQTGAHATDPSNTTVFVGGINDSVTEKVLRETFNSAGEIQTVTTPPGRGCAFVTFAHRASAEHVINNMQGTTVCGSCVRLSWGKSGRADRDRERERAGGDPIMGMGG----IQSSPTAXXXXXXXXXA--RGAPFSGLYGHPQSYASFNGAYPANIFPAGAVYGGAYP-QPGQQQPGLPPPAAAGTGQQLPQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPYQGFGFQQYPAQQQAA-YTSFNGNNAAYAQ---DPSALANDLSQLSLSGGAASAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMYGPASRSGXXXXXXXXXXXXXXPSFSLQDVRKGG--LGPASRN 551
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BLAST of mRNA_H-canaliculatus_M_contigs976.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKJ7_ECTSI)

HSP 1 Score: 592 bits (1525), Expect = 1.580e-207
Identity = 312/344 (90.70%), Postives = 322/344 (93.60%), Query Frame = 1 
Query:    1 MGDDQQYQDEGRSTAKTLWLGDVQPDWTEEYVESLFSSIAGQELEVKLIRDRHRGIVAGYGFIDFRNHETAQLVLDSLNGKPIEGTSLRYRLNWGAGGKRIEQAPEFSVFVGDLSPEVTDAELKATFLEKYSSVLGAKVVTNPMTGSSKSFGFIRFGDEKERDEALTAMNGAECCGRPIRVAPATKRTSVQGQTGAHATDPSNTTVFVGGINDSVTEKVLRETFSCAGEIHTVTTPPGRGCAFVTFAHRSSAEHVINNMQGTTVCGSCVRLSWGKSGRADRDRERERAG-EPLGGMGGMGXGIQSXXXXXXXXXXXXXXXXRGTQYSGLYGHPQSYASYNGAYP 1029
            M DDQQYQDE RS AKTLWLGDVQPDWTEEYVESLFSSI GQELEVKLIRDRHRGIVAGYGFIDFRNHETAQLVLDSLNGKPIEGTSLRYRLNWGAGGKRIEQAPE+SVFVGDLSPEVTDAELKATFL KY+SVLGAKVVTNPMTGSSKSFGFIRFGDE+ERDEALTAMNGAECCGRPIRVAPATKRTSVQGQTGAHATDPSNTTVFVGGINDSVTEKVLR+TF+ AGEI TVTTPPGRGCAFVTFAHR+SAEHVINNMQGTTVCGSCVRLSWGKSGRADRDRERERAG +P+ GMGG    IQS    XXXXXXXXX   RG  +SGLYGHPQSYAS+NGAYP
Sbjct:    1 MADDQQYQDENRSAAKTLWLGDVQPDWTEEYVESLFSSIVGQELEVKLIRDRHRGIVAGYGFIDFRNHETAQLVLDSLNGKPIEGTSLRYRLNWGAGGKRIEQAPEYSVFVGDLSPEVTDAELKATFLGKYTSVLGAKVVTNPMTGSSKSFGFIRFGDEQERDEALTAMNGAECCGRPIRVAPATKRTSVQGQTGAHATDPSNTTVFVGGINDSVTEKVLRDTFNSAGEIQTVTTPPGRGCAFVTFAHRASAEHVINNMQGTTVCGSCVRLSWGKSGRADRDRERERAGGDPIMGMGG----IQSSPTAXXXXXXXXXA--RGAPFSGLYGHPQSYASFNGAYP 338
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BLAST of mRNA_H-canaliculatus_M_contigs976.1.1 vs.
Match: Nuclear (acid binding protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLC3_9STRA)

HSP 1 Score: 294 bits (752), Expect = 5.650e-89
Identity = 162/312 (51.92%), Postives = 199/312 (63.78%), Query Frame = 1 
Query:   46 KTLWLGDVQPDWTEEYVESLFSSIA---GQELEVKLIRDRHRGIVAGYGFIDFRNHETAQLVLDSLNGKPIEGTSLRYRLNWGAGGKRIEQAPEFSVFVGDLSPEVTDAELKATFLEKYSSVLGAKVVTNPMTGSSKSFGFIRFGDEKERDEALTAMNGAECCGRPIRVAPATKRTSVQGQ---------TGAHAT----------------DPSNTTVFVGGINDSVTEKVLRETFSCAGEIHTVTTPPGRGCAFVTFAHRSSAEHVINNMQGTTVCGSCVRLSWGKSGRADRDRERERAGEPLGGMGGMG 897
            KTLW+GD+QP W E YV S+F++     G  +EVKLIRD+H G  AGYGF++F   E A+ VL++ NG  I GT  R+RLNWGAGGKR+E APEFS+FVGDL+PEVTD  L+  FLEK+ S LGAKVV +P++G SK FGF+RF +E+E++EAL+ M G  C GR IRVAPAT + +              G HA+                DP NTTVFVGGI+  VTE VLRE FS  G+I  V  PPGRGC FV + +R+SAE  I  MQG  V G  VRLSWG+S  A  +  R         MGGMG
Sbjct:    9 KTLWVGDIQPSWDEAYVGSVFANTGLEEGDVVEVKLIRDKHTGFPAGYGFVEFATAEIAEKVLETCNGNAIAGTHFRFRLNWGAGGKRMETAPEFSIFVGDLAPEVTDQMLQDIFLEKFPSTLGAKVVMDPVSGMSKGFGFVRFKNEEEKEEALSTMTGVGCGGRAIRVAPATAKKAAGSHGLGMGAGMMMGMHASPYPGMHPHMMLGGDGEDPHNTTVFVGGIDAGVTEDVLREAFSGYGDIIYVKIPPGRGCGFVQYVNRTSAETAIAKMQGADVRGCKVRLSWGRSSPARAEGRR---------MGGMG 311
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BLAST of mRNA_H-canaliculatus_M_contigs976.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G796_PHYRM)

HSP 1 Score: 260 bits (664), Expect = 5.130e-80
Identity = 133/263 (50.57%), Postives = 178/263 (67.68%), Query Frame = 1 
Query:   46 KTLWLGDVQPDWTEEYVESLFSSIAGQELEVKLIRDRHRGIVAGYGFIDFRNHETAQLVLDSLNGKPIEGTSLRYRLNWGAGGKRIEQAPEFSVFVGDLSPEVTDAELKATFLEKYSSVLGAKVVTNPMTGSSKSFGFIRFGDEKERDEALTAMNGAECCGRPIRVAPATKRTSVQGQT--GAHATDPSNTTVFVGGINDSVTEKVLRETFSCAGEIHTVTTPPGRGCAFVTFAHRSSAEHVINNMQGTTVCGSCVRLSWGKS 828
            KTLW+GD+Q  W E ++ SLF+S A Q + VKLIRD+  G  AGYGF++F     AQ VL++ NG+ I  T  R+R+NWGAGG+RIE + + S+FVGDL+P+V D  L +TF  ++SSV GAKVV +P+T  SK FGF+RFG ++E D+AL  MNG  C  RP+RV+ AT+R   +     GA   + +NTTVFVGG++ S TE  LR  F   GEI +V  PPGRGC FV +  + +AE  I+ M GT +CG  VR +WG+S
Sbjct:    3 KTLWMGDIQMHWDEAFISSLFASAAEQPV-VKLIRDKVTGYPAGYGFLEFPTQLGAQQVLETFNGQLIPNTMHRFRMNWGAGGRRIETSDDHSIFVGDLAPDVGDELLLSTFNSRFSSVRGAKVVMDPVTRMSKGFGFVRFGSKEEADQALQTMNGVYCSSRPMRVSVATERNKARQMPSFGAAEEEGANTTVFVGGLDPSTTEDELRARFGALGEIVSVKVPPGRGCGFVQYTSKEAAEVAISQMNGTVICGVKVRCAWGRS 264
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BLAST of mRNA_H-canaliculatus_M_contigs976.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DTT9_BRELC)

HSP 1 Score: 257 bits (656), Expect = 6.730e-77
Identity = 133/266 (50.00%), Postives = 179/266 (67.29%), Query Frame = 1 
Query:   46 KTLWLGDVQPDWTEEYVESLFSSIAGQELEVKLIRDRHRGIVAGYGFIDFRNHETAQLVLDSLNGKPIEGTSLRYRLNWGAGGKRIEQAPEFSVFVGDLSPEVTDAELKATFLEKYSSVLGAKVVTNPMTGSSKSFGFIRFGDEKERDEALTAMNGAECCGRPIRVAPATKRTSVQGQT--GAHATDPSNTTVFVGGINDSVTEKVLRETFSCAGEIHTVTTPPGRGCAFVTFAHRSSAEHVINNMQGTTVCGSCVRLSWGKSGRA 837
            KTLW+GD+Q  W E Y+ SLF+S + Q + VKLIRD+  G  AGYGF++F   + AQ +LD+ NG+ I  T  R+R+NWGAGG+RIE + + S+FVGDLSP+V+D  L +TF  ++S+V GAKVV +P+T  SK FGF+RFG ++E D+AL  MNG  C  RP+RV+ AT+R   + Q        D +NTTVFVGG++ S TE+ LR  F   GEI +V  PPGRGC FV +  + +AE  I  M G+ V G  VR +WG+S  A
Sbjct:    6 KTLWMGDIQMHWDEAYIVSLFASASEQPV-VKLIRDKVTGYPAGYGFLEFPTQQGAQEILDTFNGQLIPNTLHRFRMNWGAGGRRIETSDDHSIFVGDLSPDVSDDLLLSTFSARFSTVRGAKVVMDPITRMSKGFGFVRFGSKEEADQALQTMNGVYCSSRPMRVSVATERNKARQQAVFSMGEEDGANTTVFVGGLDPSTTEEELRARFGALGEIVSVKVPPGRGCGFVQYTTKEAAEIAILQMNGSVVSGVKVRCAWGRSAAA 270
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BLAST of mRNA_H-canaliculatus_M_contigs976.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CQ96_PYTOL)

HSP 1 Score: 254 bits (650), Expect = 8.210e-76
Identity = 128/269 (47.58%), Postives = 181/269 (67.29%), Query Frame = 1 
Query:   46 KTLWLGDVQPDWTEEYVESLFSSIAGQELEVKLIRDRHRGIVAGYGFIDFRNHETAQLVLDSLNGKPIEGTSLRYRLNWGAGGKRIEQAPEFSVFVGDLSPEVTDAELKATFLEKYSSVLGAKVVTNPMTGSSKSFGFIRFGDEKERDEALTAMNGAECCGRPIRVAPATKRTS--------VQGQTGAHATDPSNTTVFVGGINDSVTEKVLRETFSCAGEIHTVTTPPGRGCAFVTFAHRSSAEHVINNMQGTTVCGSCVRLSWGKS 828
            KTLW+GD+QP W E ++ SLF+S +   + VKLIRD+  G  +GYGF++F+  + AQ VL++ NG+ I  T  R+R+NWGAGG+R+E   + S+FVGDL+P+VTD  L +TF  +++SV  AKVVT+P+T  SK FGF+RFG ++E D+AL  MNG  C  RP+RV+ AT R +        + G  G    + +NTTVF+GG++ + TE+ LR  F+  GE+ +V  PPGRGC FV +  R SAE  IN M G  + GS +R +WG+S
Sbjct:    6 KTLWMGDIQPHWDEAFIGSLFASCSEIPV-VKLIRDKVTGYPSGYGFLEFQTQQGAQYVLENFNGQVIPNTMHRFRMNWGAGGRRLETGEDHSIFVGDLAPDVTDELLLSTFAARFASVRNAKVVTDPLTRMSKGFGFVRFGAKEEADQALQTMNGVYCSSRPMRVSVATDRNAGRPRQDFGMPGMVGVVDAEGANTTVFIGGLDANTTEEDLRARFAPFGEMVSVKVPPGRGCGFVHYITRDSAEMAINQMNGALINGSKIRCAWGRS 273
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BLAST of mRNA_H-canaliculatus_M_contigs976.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VIX5_9STRA)

HSP 1 Score: 254 bits (649), Expect = 8.460e-76
Identity = 130/266 (48.87%), Postives = 177/266 (66.54%), Query Frame = 1 
Query:   46 KTLWLGDVQPDWTEEYVESLFSSIAGQELEVKLIRDRHRGIVAGYGFIDFRNHETAQLVLDSLNGKPIEGTSLRYRLNWGAGGKRIEQAPEFSVFVGDLSPEVTDAELKATFLEKYSSVLGAKVVTNPMTGSSKSFGFIRFGDEKERDEALTAMNGAECCGRPIRVAPATKRTSVQGQTG--AHATDPSNTTVFVGGINDSVTEKVLRETFSCAGEIHTVTTPPGRGCAFVTFAHRSSAEHVINNMQGTTVCGSCVRLSWGKSGRA 837
            KTLW+GD+Q  W E ++ SLF++   Q + +KLIRD+  G  AGYGF++F   + AQ VL++ NG+ I  T  R+R+NWGAGG+RIE   + S+FVGDL+P+VTD  L +TF  ++SSV GAKVV +P+T  SK FGF+RFG + E D+AL  MNG  C  RP+RV+ AT+R   + Q G      + +NTTVFVGG++   TE+ LR  F   GEI ++  PPGRGC FV +  + +AE+ I  M GT V G  VR +WG+S  A
Sbjct:    6 KTLWMGDIQMHWDETFIASLFATAVEQPV-IKLIRDKVTGYPAGYGFLEFPTQQGAQQVLETYNGQLIPNTMHRFRMNWGAGGRRIESLEDHSIFVGDLAPDVTDELLLSTFNARFSSVRGAKVVMDPVTRMSKGFGFVRFGGKNEADQALQTMNGVYCSSRPMRVSVATERNKARQQMGFTMGEEEGANTTVFVGGLDPLTTEEELRARFGVLGEIVSIKVPPGRGCGFVQYTSKEAAENAILQMNGTVVSGVKVRCAWGRSAAA 270
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BLAST of mRNA_H-canaliculatus_M_contigs976.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AC95_9STRA)

HSP 1 Score: 249 bits (635), Expect = 1.090e-75
Identity = 131/250 (52.40%), Postives = 168/250 (67.20%), Query Frame = 1 
Query:   46 KTLWLGDVQPDWTEEYVESLFSSIAGQELEVKLIRDRHRGIVAGYGFIDFRNHETAQLVLDSLNGKPIEGTSLRYRLNWGAGGKRIEQAPEFSVFVGDLSPEVTDAELKATFLEKYSSVLGAKVVTNPMTGSSKSFGFIRFGDEKERDEALTAMNGAECCGRPIRVAPATKRTS----VQGQTGAHATDPSNTTVFVGGINDSVTEKVLRETFSCAGEIHTVTTPPGRGCAFVTFAHRSSAEHVINNMQG 783
            KTLW+GD+Q +W E +V +LFSS+ GQE  VKLIRD+  G   GYGFI+F   E AQ  L++LNG+ I  T +R+RLNWGAGGKR+E A ++S+FVGDL+PEVTD  L A F  KY+SV GAKVV + MT +SK FGF+RFG + E D+AL  M+G  C  RP+RV+ AT R      ++        D SNTTVFVGG++ S++E  LR+ FS  GEI  V  PPGRGC FV +   + A+  I  M G
Sbjct:    5 KTLWMGDIQANWEEFFVRALFSSL-GQEPNVKLIRDKGTGCPVGYGFIEFETVEAAQTALETLNGQLIPNTPIRFRLNWGAGGKRLESAEDYSIFVGDLAPEVTDDALFAVFSAKYASVRGAKVVIDQMTRTSKGFGFVRFGVKAEADQALEQMHGVPCLSRPMRVSTATDRIKPTPLMKLPPSPSPEDESNTTVFVGGLDPSISEDDLRKHFSTLGEIVNVKVPPGRGCGFVQYESHAIAQQAIQEMTG 253
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BLAST of mRNA_H-canaliculatus_M_contigs976.1.1 vs.
Match: Nuclear (acid binding n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A6W8_PLAHL)

HSP 1 Score: 253 bits (647), Expect = 1.410e-75
Identity = 130/266 (48.87%), Postives = 179/266 (67.29%), Query Frame = 1 
Query:   46 KTLWLGDVQPDWTEEYVESLFSSIAGQELEVKLIRDRHRGIVAGYGFIDFRNHETAQLVLDSLNGKPIEGTSLRYRLNWGAGGKRIEQAPEFSVFVGDLSPEVTDAELKATFLEKYSSVLGAKVVTNPMTGSSKSFGFIRFGDEKERDEALTAMNGAECCGRPIRVAPATKRTSVQGQTGAHAT--DPSNTTVFVGGINDSVTEKVLRETFSCAGEIHTVTTPPGRGCAFVTFAHRSSAEHVINNMQGTTVCGSCVRLSWGKSGRA 837
            KTLW+GD+Q  W E ++ SLF+S A Q + VKLIRD+  G  AGYGF++F     AQ VL++ NG+ I  T  R+R+NWGAGG+RIE + + S+FVGDL+P+V D  L +TF  ++++V GAKVV +P+T  SK FGF+RFG ++E D+AL  MNG  C  RP+RV+ AT+R   + Q G   +  D +NTTVFVGG++   +E+ LR  F   GEI +V  PPGRGC FV +  + +AE  I+ M G+ V G  VR +WG+S  A
Sbjct:    6 KTLWMGDIQMHWDETFIVSLFASAAEQPI-VKLIRDKVTGYPAGYGFLEFPTQRGAQQVLETFNGQLIPNTLHRFRMNWGAGGRRIETSDDHSIFVGDLAPDVADELLLSTFSARFTTVRGAKVVMDPITRMSKGFGFVRFGSKEEADQALQTMNGVFCSSRPMRVSVATERNKARQQLGFSMSEEDGANTTVFVGGLDPGTSEEELRTRFGALGEIVSVKVPPGRGCGFVQYTTKEAAEAAISQMNGSVVGGVKVRCAWGRSAAA 270
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs976.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BYT1_PYTIN)

HSP 1 Score: 254 bits (648), Expect = 1.870e-75
Identity = 131/270 (48.52%), Postives = 177/270 (65.56%), Query Frame = 1 
Query:   46 KTLWLGDVQPDWTEEYVESLFSSIAGQELEVKLIRDRHRGIVAGYGFIDFRNHETAQLVLDSLNGKPIEGTSLRYRLNWGAGGKRIEQAPEFSVFVGDLSPEVTDAELKATFLEKYSSVLGAKVVTNPMTGSSKSFGFIRFGDEKERDEALTAMNGAECCGRPIRVAPATKRTS--------VQGQTGAHATDPSNTTVFVGGINDSVTEKVLRETFSCAGEIHTVTTPPGRGCAFVTFAHRSSAEHVINNMQGTTVCGSCVRLSWGKSG 831
            KTLW+GD+QP W E ++ SLF+S + Q + VKLIRD+  G  +GY F++F +   AQ VL++ NG+ +  T  R+R+NWGAGG+RIE   + SVFVGDL+P+VTD  L  TF  +++SV  AKVVT+P+T +SK FGF+RFG ++E D+AL  MNG  C  RP+RV+ AT R           QG TG    D  NTTVF+GG++ S  E  LR  F+  GEI +V  PPGRGC FV +  + SAE  I+ + G  V G  +R +WG+SG
Sbjct:    6 KTLWMGDIQPQWDEAFIGSLFASCSEQPV-VKLIRDKVTGYPSGYCFLEFPSQRGAQXVLENFNGQAVPNTMHRFRMNWGAGGRRIETPEDHSVFVGDLAPDVTDXVLMNTFATRFASVRSAKVVTDPITRTSKGFGFVRFGVKEEADQALQTMNGVYCSSRPMRVSVATDRNRNRNEYGGFPQGPTGVPDADAPNTTVFIGGLDASTAEDELRARFAPFGEITSVRIPPGRGCGFVHYVSKESAEMAISQLNGAVVGGVKIRCAWGRSG 274
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs976.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized1.130e-23178.37protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.580e-20790.70protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Nuclear5.650e-8951.92acid binding protein n=2 Tax=Monodopsidaceae TaxID... [more]
Uncharacterized5.130e-8050.57protein n=1 Tax=Phytophthora ramorum TaxID=164328 ... [more]
Uncharacterized6.730e-7750.00protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A... [more]
Uncharacterized8.210e-7647.58protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
Uncharacterized8.460e-7648.87protein n=1 Tax=Peronospora effusa TaxID=542832 Re... [more]
Uncharacterized1.090e-7552.40protein n=1 Tax=Thraustotheca clavata TaxID=74557 ... [more]
Nuclear1.410e-7548.87acid binding n=1 Tax=Plasmopara halstedii TaxID=47... [more]
Uncharacterized1.870e-7548.52protein n=2 Tax=Pythium insidiosum TaxID=114742 Re... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs976contigH-canaliculatus_M_contigs976:572..4758 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FKJ7
Preferred nameTRNAU1AP
PFAMsRRM_1
Model size1587
Max annot lvl2759|Eukaryota
KEGG koko:K11274
Hectar predicted targeting categoryother localisation
GOsGO:0000049,GO:0000243,GO:0000245,GO:0000302,GO:0000375,GO:0000377,GO:0000398,GO:0000932,GO:0001101,GO:0001514,GO:0003674,GO:0003676,GO:0003723,GO:0003727,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005681,GO:0005684,GO:0005685,GO:0005737,GO:0005829,GO:0006139,GO:0006376,GO:0006396,GO:0006397,GO:0006412,GO:0006414,GO:0006417,GO:0006451,GO:0006518,GO:0006725,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0007005,GO:0008143,GO:0008150,GO:0008152,GO:0008380,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009719,GO:0009725,GO:0009735,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009896,GO:0009987,GO:0010033,GO:0010035,GO:0010193,GO:0010467,GO:0010468,GO:0010494,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010610,GO:0010628,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0030532,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031329,GO:0031330,GO:0031331,GO:0032268,GO:0032269,GO:0032991,GO:0033120,GO:0033554,GO:0034248,GO:0034249,GO:0034599,GO:0034605,GO:0034622,GO:0034641,GO:0034645,GO:0035770,GO:0036464,GO:0042221,GO:0042493,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043484,GO:0043487,GO:0043488,GO:0043489,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045934,GO:0045935,GO:0046483,GO:0046677,GO:0048024,GO:0048026,GO:0048255,GO:0048471,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050684,GO:0050685,GO:0050779,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051716,GO:0060255,GO:0061013,GO:0061014,GO:0061157,GO:0061158,GO:0065003,GO:0065007,GO:0065008,GO:0070717,GO:0070887,GO:0070935,GO:0071004,GO:0071010,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097525,GO:0120114,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1902369,GO:1902373,GO:1903311,GO:1903312,GO:1903313,GO:1990904,GO:2000112,GO:2000113,GO:2000815
Exons6
Evalue2.59e-208
EggNOG OGsKOG0118@1|root,KOG0118@2759|Eukaryota
DescriptionRNA binding
Cds size1587
COG categoryH
BRITEko00000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs976.1.1prot_H-canaliculatus_M_contigs976.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs976 572..4758 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854225.96309-CDS-H-canaliculatus_M_contigs976:571..7931696854225.96309-CDS-H-canaliculatus_M_contigs976:571..793Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs976 572..793 -
1696854225.9758556-CDS-H-canaliculatus_M_contigs976:1412..22031696854225.9758556-CDS-H-canaliculatus_M_contigs976:1412..2203Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs976 1413..2203 -
1696854225.986754-CDS-H-canaliculatus_M_contigs976:3116..34401696854225.986754-CDS-H-canaliculatus_M_contigs976:3116..3440Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs976 3117..3440 -
1696854225.9972749-CDS-H-canaliculatus_M_contigs976:3929..40611696854225.9972749-CDS-H-canaliculatus_M_contigs976:3929..4061Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs976 3930..4061 -
1696854226.010766-CDS-H-canaliculatus_M_contigs976:4277..43231696854226.010766-CDS-H-canaliculatus_M_contigs976:4277..4323Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs976 4278..4323 -
1696854226.0305338-CDS-H-canaliculatus_M_contigs976:4686..47581696854226.0305338-CDS-H-canaliculatus_M_contigs976:4686..4758Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs976 4687..4758 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs976.1.1

>prot_H-canaliculatus_M_contigs976.1.1 ID=prot_H-canaliculatus_M_contigs976.1.1|Name=mRNA_H-canaliculatus_M_contigs976.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=529bp
MGDDQQYQDEGRSTAKTLWLGDVQPDWTEEYVESLFSSIAGQELEVKLIR
DRHRGIVAGYGFIDFRNHETAQLVLDSLNGKPIEGTSLRYRLNWGAGGKR
IEQAPEFSVFVGDLSPEVTDAELKATFLEKYSSVLGAKVVTNPMTGSSKS
FGFIRFGDEKERDEALTAMNGAECCGRPIRVAPATKRTSVQGQTGAHATD
PSNTTVFVGGINDSVTEKVLRETFSCAGEIHTVTTPPGRGCAFVTFAHRS
SAEHVINNMQGTTVCGSCVRLSWGKSGRADRDRERERAGEPLGGMGGMGG
GIQSSPTAAAAAAAAAAAAARGTQYSGLYGHPQSYASYNGAYPANLFPAG
AVYGGAYPPQTGQQQQQPGLPPPTTPAATAQQQQLPQQQQQQQQQQAQQA
QQAAAQQQQYAQQPYSQQSYAPYQGFGFQQYPTQQQAGGYTSFTGTNAAY
AVRSGDPSALAADLSQLSLSGGSSSVGGRAARGGSRSGGGMYGPAGRAGP
GHGQGQGASFSLQDVRKGGVGLGPASRN*
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mRNA from alignment at H-canaliculatus_M_contigs976:572..4758-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs976.1.1 ID=mRNA_H-canaliculatus_M_contigs976.1.1|Name=mRNA_H-canaliculatus_M_contigs976.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=4187bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs976:572..4758- (Hapterophycus canaliculatus Oshoro7m male)
ATGGGTGACGATCAGCAGTATCAGGACGAGGGCCGCTCTACCGCGAAGAC
TCTCTGGTTGGGCGATGTTCAAGTGAGTTGCTTCGTGGTGCCTCAACTTC
CGGGATCCCGAAGAAAAAAAGCGCCTCCAGCGGAAGGCTGGTTGATGTAT
GAGTCGAGACGCATTGGCGGGTTTCAACGGAGAAATTGGCACCTCCTCGG
CTGCGCCAGATCTGCAAGGTTGCCGTCGCTAGGGCTCGTCGCGCAATGTA
TGGTGTTAGCGTTTGCTGTAGAGAAGGCGATCGGCATTTTCTGGATGCGC
CCACCTCTGTGGTGTCCGTAGTTTCAAGAGACAACGACAAAATCTGCTCT
TTGTGCTGCCGCCTTTCCGCCTTGCCGCCCTCCCTAACCTCATCAATGCC
TCCCTTGTGCGTGCCTCGCCGCTTAACCGTCGCAGCCGGACTGGACAGAG
GAATACGTGGAGAGTTTGTTTAGCAGCATAGGTGAGTCCAGAAGCTCGTA
CCATGGCAGCGGCGAACGGGATGAACTCTGCGATGGCCGGCGGGCTTCTC
GTTCTCCACCCGCCGCCGCCTTCCCGGCCAGCAGCAGCAAGATGTGATGT
TGGCACACTTTTTTCATGTTCAATCGTTTCCTGCGCCGCTGCAAACTCCA
GTCATCCCTGTCCGCTGACGTGTACCGCGCACCATTGCGTCTTGCAGCAG
GACAAGAGCTGGAGGTCAAGCTCATCCGCGATAGGCACAGAGGGATTGTC
GCTGGATACGGATTCATCGACTTCCGAAACCATGAGACCGCCCAGCTGGT
TCTGGACTCGTTGAACGGGAAGCCAATTGGTGAGTAAGGTAGTGATCAGT
TCACAGGGTAATCGACCCATCGCGCGCATGCACACCGCGACAGCGAAGCA
AAGAGAACCTGGTCGCCGTCGCGCGTGAGCAGGGAGTAACGGGGCATGCG
AAAGAGAACGAGCGTTCGTCGAAAGCAACATTCGGAAACCTTCCGTCCCT
TTTTGAATCGGTTGGCGGCTTGTTTGCTTGTTTGTCCACGGACGGAAATT
ACTTGGGTGCTGTGTTTCCAGAAAAAGACCTCATCCACCCGCCCAAAATT
TCCGACCGGCCCACGATCCAAATATTCCTACAACATTTTCCCACCACTTT
GGTGACCCACACACGAAACGAAGGGGAGGCAAGCAAATAAGGAGGCGTCG
AGGGACCACAAACTCCCAGAGGTGACAAACGCACGTGCCTCCAAAAGACT
AACCGCCAGTCATGCCCTCCTCAACATGCTCGTTGTGTCGTCTCTTACTC
CCACGTTTACTCTCCCAGAGGGCACGTCCCTGCGTTACCGTCTCAACTGG
GGCGCGGGCGGCAAGCGGATTGAGCAAGCCCCGGAGTTCTCCGTCTTCGT
GGGGGACCTCTCGCCCGAGGTTACGGACGCGGAACTCAAGGCGACCTTCC
TCGAGAAATATTCGTCCGTGCTCGGCGCCAAGGTCGTGACCAACCCCATG
ACCGGCTCCTCCAAGAGCTTCGGCTTCATCAGGTTCGGGGACGAGAAGGA
GAGGGACGAGGCGCTCACAGCCATGAACGGCGCGGAGTGCTGTGGCCGTC
CGATTCGCGTGGCGCCGGCCACCAAGCGCACGAGCGTTCAAGGTAGGCAG
ATACGTCAGGCCTTGTTCCCTGGGAATCGGGAGCCACAAATCTACGCGTA
CATGCCTTTTTTTCCTTTCCACGCGGTAGAAACGTATTACTTGTTGCCGG
TCGTGCTTTCAGTTTGAGTGCCTTGGCGCCTTTTCCCGACAAAAAAGAGG
TCTTTTCGTCCGCACACCAACAAACAAGTTGCCCGTTCGAATCCCAGGGG
GATGATGCTGGTCCTTCGTTTTTTGCGACACCTGTATTTGGAGACACTTC
CATGCAACAACATGGATCGTTTCCTACCCTTGGCCGTAGTTTCTCCTGTT
GCTCAAACAAGAACGCGTGACGTATCGGGTGCGGTAAGGACTTTTCGAGC
TGTTGTTCTTCCTTGGAAATATACATACCCGCCTTCTGTACGCTGTGTTC
TGGCTTTGTTCATACGTGGAGAACTTCAAGTACCCAGTTACTAGAGATTT
AAAGACGTCTGCGTTGCTTTGTCAAGACATAGAATACATGCCTCGTATTG
AACGTGCTCCTTAATTTGTGTACATGTTTTTTGCCCTGTTTCGGCCGAAA
CGACCATCACGGAGGAATCCCTCTCGCACTGGCTTGATACTACTGGTTGA
TGTGCAGTTGCGAGGGTATCCTCGGAGCAAGCGGAGCAGTTTTTCATTAC
AAGGCACCACATCACTGTGTCGCCGGCATGTCAACAGCGCACAGAAGTCA
ATCACTGTTGACTAGAAATTAAATTTCGTGTCACCAAACTTAATCGGCAT
ACCTTTACTTGTATGCTTTCTGTACCTTTGTCAACCTCAGTTTCCACGTT
TCCACGCACATCGACACCACCCTGCGGTGCCAACAGTTGATCCGCGCTCT
TCCATCTTTCCCCGCCGATTAAACCTCGACGCCCAACCGCATGCATCAAA
AACAGGACAAACCGGAGCACACGCAACGGATCCCAGCAACACGACCGTTT
TCGTCGGGGGTATCAACGACTCTGTGACCGAGAAGGTCCTCCGGGAGACG
TTCTCGTGCGCCGGCGAGATCCACACCGTCACCACACCCCCCGGCCGCGG
CTGCGCCTTCGTGACTTTCGCTCACCGCTCCAGCGCCGAGCACGTCATCA
ACAACATGCAGGGCACGACCGTGTGCGGCAGCTGCGTGCGCCTCTCGTGG
GGCAAGTCCGGGCGTGCCGACCGTGATAGAGAACGAGAGAGAGCCGGGGA
GCCCCTCGGGGGCATGGGCGGCATGGGCGGCGGTATCCAGTCTTCGCCGA
CCGCCGCTGCCGCCGCCGCCGCCGCTGCCGCCGCCGCTGCCCGCGGCACC
CAGTACTCGGGCCTGTACGGTCACCCCCAATCGTATGCCTCTTACAACGG
AGCGTACCCAGCCAACCTGTTCCCCGCGGGGGCCGTCTACGGCGGCGCGT
ACCCGCCTCAAACGGGCCAGCAGCAGCAGCAACCAGGTCTCCCGCCCCCC
ACCACCCCAGCCGCGACGGCCCAACAGCAGCAGCTTCCGCAGCAACAGCA
GCAACAGCAGCAACAGCAAGCTCAACAGGCTCAACAGGCGGCGGCGCAGC
AACAGCAATATGCGCAGCAGCCGTACTCGCAGCAGTCCTACGCTCCCTAC
CAAGGTTTCGGATTCCAGCAGTATCCGACCCAGCAGCAGGCCGGCGGGTA
TACGAGTTTCACCGGAACGAACGCGGCCTATGCGGTGCGTTCGGGCGTTT
TCTCGGACGTTTTTGGGCCGCGTTGCTGTTGGTTTCTCATTGATCCTTTA
CCGCTCGAGCTTTCATGAAGGTCGCCGATCGATTGAGCTTGCTGCTAGAT
ACAGGAAGTGCTTGGCGTGCGGAAACATATGCGTTGGCCGTAAATTCAGT
TTCCATGCACATAATTATATCCAAGAAATCCTTCAAAAGCGTGTCCCCCC
ATGCATGATCCTCGGAAGTCGCGGTAACCCCAGAGGTAAGCTTGTTTAGT
AGTCAGACGTTGTGAATTTGAGTGTGAATAGGTGTGCAGTGTGCAAGAAT
GTTTGGAGGAGGCGCGCCCCCTGCCTCAACCGCGGCAAATCGGACGCACG
GGCATGTTATCGGATTAAAGCTGCAATAGCTGATCGAGTATGAGCAAGGT
CACGTGACACCAACGAGGCACACCGGTGCATACACCTCTTTGTGGTGAGG
GACGTGCATGAAAAGATTTGGAGGCGCTTCCGCGAGTTCGCTCAAAATCG
TCACGCGTTCTCTCGCCTAGAGTTTTTCGGGAATTACTCTCCCGTACCGC
AGGATTTATTCACCATGCGGCCTTTCGCGTACGCCGACCGATTTCGTTCC
AACGATCGCAAACAGGACCCGAGTGCACTCGCGGCAGACCTCTCCCAGCT
CAGCCTGTCCGGCGGGAGCAGCAGTGTGGGCGGCCGTGCCGCGCGCGGAG
GTTCTCGGAGCGGCGGTGGCATGTATGGGCCTGCCGGCCGCGCGGGACCG
GGCCACGGTCAGGGCCAAGGGGCGTCGTTTTCTCTGCAGGACGTAAGGAA
AGGCGGCGTCGGTCTTGGGCCGGCCAGCCGCAACTGA
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs976:572..4758-

>mRNA_H-canaliculatus_M_contigs976.1.1 ID=mRNA_H-canaliculatus_M_contigs976.1.1|Name=mRNA_H-canaliculatus_M_contigs976.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=1587bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs976:572..4758- (Hapterophycus canaliculatus Oshoro7m male)
ATGGGTGACGATCAGCAGTATCAGGACGAGGGCCGCTCTACCGCGAAGAC
TCTCTGGTTGGGCGATGTTCAACCGGACTGGACAGAGGAATACGTGGAGA
GTTTGTTTAGCAGCATAGCAGGACAAGAGCTGGAGGTCAAGCTCATCCGC
GATAGGCACAGAGGGATTGTCGCTGGATACGGATTCATCGACTTCCGAAA
CCATGAGACCGCCCAGCTGGTTCTGGACTCGTTGAACGGGAAGCCAATTG
AGGGCACGTCCCTGCGTTACCGTCTCAACTGGGGCGCGGGCGGCAAGCGG
ATTGAGCAAGCCCCGGAGTTCTCCGTCTTCGTGGGGGACCTCTCGCCCGA
GGTTACGGACGCGGAACTCAAGGCGACCTTCCTCGAGAAATATTCGTCCG
TGCTCGGCGCCAAGGTCGTGACCAACCCCATGACCGGCTCCTCCAAGAGC
TTCGGCTTCATCAGGTTCGGGGACGAGAAGGAGAGGGACGAGGCGCTCAC
AGCCATGAACGGCGCGGAGTGCTGTGGCCGTCCGATTCGCGTGGCGCCGG
CCACCAAGCGCACGAGCGTTCAAGGACAAACCGGAGCACACGCAACGGAT
CCCAGCAACACGACCGTTTTCGTCGGGGGTATCAACGACTCTGTGACCGA
GAAGGTCCTCCGGGAGACGTTCTCGTGCGCCGGCGAGATCCACACCGTCA
CCACACCCCCCGGCCGCGGCTGCGCCTTCGTGACTTTCGCTCACCGCTCC
AGCGCCGAGCACGTCATCAACAACATGCAGGGCACGACCGTGTGCGGCAG
CTGCGTGCGCCTCTCGTGGGGCAAGTCCGGGCGTGCCGACCGTGATAGAG
AACGAGAGAGAGCCGGGGAGCCCCTCGGGGGCATGGGCGGCATGGGCGGC
GGTATCCAGTCTTCGCCGACCGCCGCTGCCGCCGCCGCCGCCGCTGCCGC
CGCCGCTGCCCGCGGCACCCAGTACTCGGGCCTGTACGGTCACCCCCAAT
CGTATGCCTCTTACAACGGAGCGTACCCAGCCAACCTGTTCCCCGCGGGG
GCCGTCTACGGCGGCGCGTACCCGCCTCAAACGGGCCAGCAGCAGCAGCA
ACCAGGTCTCCCGCCCCCCACCACCCCAGCCGCGACGGCCCAACAGCAGC
AGCTTCCGCAGCAACAGCAGCAACAGCAGCAACAGCAAGCTCAACAGGCT
CAACAGGCGGCGGCGCAGCAACAGCAATATGCGCAGCAGCCGTACTCGCA
GCAGTCCTACGCTCCCTACCAAGGTTTCGGATTCCAGCAGTATCCGACCC
AGCAGCAGGCCGGCGGGTATACGAGTTTCACCGGAACGAACGCGGCCTAT
GCGGTGCGTTCGGGCGACCCGAGTGCACTCGCGGCAGACCTCTCCCAGCT
CAGCCTGTCCGGCGGGAGCAGCAGTGTGGGCGGCCGTGCCGCGCGCGGAG
GTTCTCGGAGCGGCGGTGGCATGTATGGGCCTGCCGGCCGCGCGGGACCG
GGCCACGGTCAGGGCCAAGGGGCGTCGTTTTCTCTGCAGGACGTAAGGAA
AGGCGGCGTCGGTCTTGGGCCGGCCAGCCGCAACTGA
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