mRNA_H-canaliculatus_M_contigs9744.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs9744.1.1
Unique NamemRNA_H-canaliculatus_M_contigs9744.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs9744.1.1 vs.
Match: Enkurin (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0N0_ECTSI)

HSP 1 Score: 256 bits (654), Expect = 5.890e-83
Identity = 141/190 (74.21%), Postives = 157/190 (82.63%), Query Frame = 1
Query:    1 GIKEGKRSTDPRNFLRVGEGIEARRRAGKRPDLPRLGIYGL--PRGGSAXXXXXXXXXXXXX--VDRGLQPLLARLKPPVPRREERPTMGLYCAKNFVTSNAVEAILAVPVNRRQLPIDYLKKEDFGRVPDYLAHVKAEVRAENEMVEEFVREQMGISSIDEEEIPKMPSEEQAGLVDKLKAKWGDVNCR 558
            GIKEGKRST+PR+FLRVGEG EARRRAGKRP+LP++ ++GL    GG+A               + RGLQ L AR+KPPVPRR ERPTMGL+ AKNFVTSNAVE ILAVP NRR+ PIDYLKKEDFGRVPDYLA V+AEVRAENEMVEEFVREQMGIS+I +EEIP+MPSEEQA LVDKLKAKW DVNCR
Sbjct:   48 GIKEGKRSTEPRHFLRVGEGTEARRRAGKRPELPKI-VHGLGGSGGGAARSGSSAGWASRGPTGMKRGLQLLPARMKPPVPRRGERPTMGLHSAKNFVTSNAVETILAVPANRRRPPIDYLKKEDFGRVPDYLAQVQAEVRAENEMVEEFVREQMGISAIAKEEIPEMPSEEQAELVDKLKAKWDDVNCR 236          
BLAST of mRNA_H-canaliculatus_M_contigs9744.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1M7_9STRA)

HSP 1 Score: 142 bits (357), Expect = 8.100e-38
Identity = 76/157 (48.41%), Postives = 101/157 (64.33%), Query Frame = 1
Query:  226 VPRREERPTMGLYCAKNFVTSNAVEAILAVPVNRRQLPIDYLKKEDFGRVPDYLAHVKAEVRAENEMVEEFVREQMGISSIDEEEIPKMPSEEQAGLVDKLKAKWGDVNCRYQLLVHQTFFDN-GRLVAKARLERELDEIEEYIAKLTK-GPVTVVP 690
            VP R+E+P MGL  AKNF+T+NAVE IL VP  R Q   DYL+K D+G+ P YLA VK E+  EN+M++ +VREQMG  S  + +  +M   E+  L+D LKAKWG VN +YQ + H    D  G++  K  +E EL  +EE I +L + GPV V P
Sbjct:  107 VPLRDEKPVMGLRTAKNFITANAVETILQVPTLRGQTEPDYLRKADYGQTPSYLAQVKDEIHRENDMIDAYVREQMGYESTHQTQYEEMSEGERLELIDALKAKWGAVNQKYQKICHMVKLDTIGKVKRKEAMEAELRALEEDIERLERPGPVLVAP 263          
BLAST of mRNA_H-canaliculatus_M_contigs9744.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHD5_PYTOL)

HSP 1 Score: 139 bits (349), Expect = 1.660e-36
Identity = 80/161 (49.69%), Postives = 103/161 (63.98%), Query Frame = 1
Query:  217 KPPVPRREERPTMGLYCAKNFVTSNAVEAILAVPVNRRQL---PIDYLKKEDFGRVPDYLAHVKAEVRAENEMVEEFVREQMGISSIDEE-EIPKMPSEEQAGLVDKLKAKWGDVNCRYQLLVHQTFFDN-GRLVAKARLERELDEIEEYIAKLTKGPVTV 684
            +P V +R+E+P MGL  +KNFVT+NAVEAILAVP  R ++   P  Y+KKED+G+VP YL  VK E+  ENEM+EEFVR+   I   DE      M   E+  LVD LKAKW  VN +YQ L H   FD  G++  K   E+EL ++E+ I  L+KG V V
Sbjct:  106 RPSVVKRDEKPIMGLKSSKNFVTANAVEAILAVPGTRARVTREPPQYVKKEDYGQVPKYLNQVKDEIERENEMIEEFVRQNKNIMEEDEGGRAEPMDERERKHLVDALKAKWDHVNAKYQKLCHNVVFDTLGKVRRKETFEKELTQLEKDIELLSKGQVVV 266          
BLAST of mRNA_H-canaliculatus_M_contigs9744.1.1 vs.
Match: Enkurin (domain-containing protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GRD4_9STRA)

HSP 1 Score: 137 bits (346), Expect = 3.700e-36
Identity = 75/161 (46.58%), Postives = 104/161 (64.60%), Query Frame = 1
Query:  217 KPPVPRREERPTMGLYCAKNFVTSNAVEAILAVPVNRRQL----PIDYLKKEDFGRVPDYLAHVKAEVRAENEMVEEFVREQMGISSIDEEEIPKMPSEEQAGLVDKLKAKWGDVNCRYQLLVHQTFFDN-GRLVAKARLERELDEIEEYIAKLTKGPVTV 684
            KPP+ +  E+P MGL  +KNF+ +NAVEAIL VP NR ++    P+ Y  K D+G+VP+YL  VK E+  ENEM+EEFVR+   I +  E ++  M  +E+  L+D LKAKW  VN +YQ L H   FD  G++  K   E+EL +IE+ I  L++GPV V
Sbjct:  103 KPPLVKANEKPVMGLKTSKNFIAANAVEAILDVPGNRARVKAAAPV-YRDKPDYGQVPEYLREVKQEIEQENEMIEEFVRQNKNILADQEPKVEAMDDDERLQLIDALKAKWDHVNAKYQKLCHNVSFDTQGKVRRKETFEKELTQIEKDIQVLSRGPVAV 262          
BLAST of mRNA_H-canaliculatus_M_contigs9744.1.1 vs.
Match: Enkurin (domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WDZ9_9STRA)

HSP 1 Score: 137 bits (346), Expect = 6.190e-36
Identity = 76/163 (46.63%), Postives = 106/163 (65.03%), Query Frame = 1
Query:  217 KPPVPRREERPTMGLYCAKNFVTSNAVEAILAVPVNRRQLPID---YLKKEDFGRVPDYLAHVKAEVRAENEMVEEFVREQMGISSIDEEE---IPKMPSEEQAGLVDKLKAKWGDVNCRYQLLVHQTFFDN-GRLVAKARLERELDEIEEYIAKLTKGPVTV 684
            +PPV +R+++P MGL  AKN++T+NAVE ILA+P NR ++  +   Y+KKEDFG+VP YL  VK E+  EN M+EEFVR+   +  +DEE    +  M   E+  LVD LK+KW  VN +YQ L H   FD  G++  K   E+ELD++E+ I  L KG V +
Sbjct:  117 RPPVVKRDDKPIMGLKSAKNYITANAVETILAIPGNRARVRNEQPQYMKKEDFGQVPRYLGQVKDEIERENSMIEEFVRQNHDL--MDEENRDRVEDMDENERLALVDALKSKWDHVNAKYQKLCHNVVFDTLGKVRRKETFEKELDQLEKDIQLLEKGHVVI 277          
BLAST of mRNA_H-canaliculatus_M_contigs9744.1.1 vs.
Match: Enkurin (domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UD14_9STRA)

HSP 1 Score: 137 bits (344), Expect = 7.330e-36
Identity = 75/160 (46.88%), Postives = 102/160 (63.75%), Query Frame = 1
Query:  217 KPPVPRREERPTMGLYCAKNFVTSNAVEAILAVPVNR---RQLPIDYLKKEDFGRVPDYLAHVKAEVRAENEMVEEFVREQMGISSIDEEEIPKMPSEEQAGLVDKLKAKWGDVNCRYQLLVHQTFFDN-GRLVAKARLERELDEIEEYIAKLTKGPVTV 684
            KP + + +E+P MGL  +KNF+T+NAVEAIL +P NR   +Q    Y  K DFG+VP YL  VK E+  ENEM+EEFVR+   I +  E ++  M  +E+  L+D LKAKW  VN +YQ L H   FD  G++  K   E+EL +IE+ I  L++GPV V
Sbjct:  103 KPALVKADEKPVMGLKTSKNFITANAVEAILEMPGNRARAKQTAPVYRDKPDFGQVPSYLREVKQEIEQENEMIEEFVRQNKNILADQEPKVEAMDDDERLQLIDALKAKWDHVNAKYQKLCHNVSFDTQGKVRRKETFEKELTQIEKDIDVLSRGPVAV 262          
BLAST of mRNA_H-canaliculatus_M_contigs9744.1.1 vs.
Match: Enkurin (domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFA4_AURAN)

HSP 1 Score: 133 bits (334), Expect = 1.040e-35
Identity = 69/153 (45.10%), Postives = 102/153 (66.67%), Query Frame = 1
Query:  217 KPPVPRREERPTMGLYCAKNFVTSNAVEAILAVPVNRRQLPIDYLKKEDFGRVPDYLAHVKAEVRAENEMVEEFVREQMGISSIDEEEIPKM-PSEEQAGLVDKLKAKWGDVNCRYQLLVHQTFFDN-GRLVAKARLERELDEIEEYIAKLTK 669
            K  VPRR E+P MGL  +KNF+T+NAVEAIL VP  +     DYLKK D+ +VP YL  VK E+R ENEM++ +V+EQMG+++ ++E++ ++   +E++ L+  LK KW  VN +YQ + H    D  G++  K  +E+EL ++E  I KL K
Sbjct:    1 KSAVPRRTEKPVMGLKTSKNFITANAVEAILQVPTVKYTAEPDYLKKADYAQVPAYLGQVKEEIRRENEMIDAYVKEQMGLNTEEKEDLSELLADDERSRLISALKRKWDAVNAKYQKMTHNVNLDTVGKVKRKESMEKELKQLEADIGKLEK 153          
BLAST of mRNA_H-canaliculatus_M_contigs9744.1.1 vs.
Match: Enkurin (domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XD57_9STRA)

HSP 1 Score: 136 bits (343), Expect = 1.060e-35
Identity = 75/160 (46.88%), Postives = 104/160 (65.00%), Query Frame = 1
Query:  217 KPPVPRREERPTMGLYCAKNFVTSNAVEAILAVPVNR---RQLPIDYLKKEDFGRVPDYLAHVKAEVRAENEMVEEFVREQMGISSIDEEEIPKMPSEEQAGLVDKLKAKWGDVNCRYQLLVHQTFFDN-GRLVAKARLERELDEIEEYIAKLTKGPVTV 684
            KP V + +E+P MGL  +KNFVT+NAVEAIL VP  R   +Q+P  Y  K D+G+VP+YL  VK E+  EN+M+EEFVR+   + +  E ++  M   E+  L+D LKAKW  VN +YQ L H   FD  G++  K  LE+EL ++E+ I  L++GPV V
Sbjct:  103 KPAVVKVDEKPVMGLKTSKNFVTANAVEAILDVPGARARVKQVPPVYRDKPDYGQVPEYLKEVKQEIEQENDMIEEFVRQNKNVMADQEPKVDVMDETERLQLIDALKAKWDHVNTKYQKLCHNVSFDTQGKVRRKETLEKELTQLEKDIQILSRGPVAV 262          
BLAST of mRNA_H-canaliculatus_M_contigs9744.1.1 vs.
Match: Aste57867_18828 (protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LCU2_9STRA)

HSP 1 Score: 136 bits (342), Expect = 1.450e-35
Identity = 76/160 (47.50%), Postives = 102/160 (63.75%), Query Frame = 1
Query:  217 KPPVPRREERPTMGLYCAKNFVTSNAVEAILAVPVNR---RQLPIDYLKKEDFGRVPDYLAHVKAEVRAENEMVEEFVREQMGISSIDEEEIPKMPSEEQAGLVDKLKAKWGDVNCRYQLLVHQTFFDN-GRLVAKARLERELDEIEEYIAKLTKGPVTV 684
            KP + + +E+P MGL  +KNFVT+NAVEAIL VP +R   +  P  Y  K D+G+VP+YL  VK E+  ENEM+EEFVR    I + DE ++  M   E+  L+D LKAKW  VN +YQ L H   FD  G++  K   E+EL +IE+ I  L++GPV V
Sbjct:  103 KPALVKADEKPVMGLKTSKNFVTANAVEAILDVPGSRARAKNAPPVYRDKPDYGQVPEYLREVKQEIEQENEMIEEFVRMNKNIMAEDEPKVDVMDDAERDNLIDALKAKWDHVNGKYQKLCHNVSFDTQGKVRRKETFEKELTQIEKDIQVLSRGPVAV 262          
BLAST of mRNA_H-canaliculatus_M_contigs9744.1.1 vs.
Match: Enkurin (domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BZX0_SAPPC)

HSP 1 Score: 133 bits (335), Expect = 1.630e-34
Identity = 74/161 (45.96%), Postives = 103/161 (63.98%), Query Frame = 1
Query:  217 KPPVPRREERPTMGLYCAKNFVTSNAVEAILAVPVNR---RQLPIDYLKKEDFGRVPDYLAHVKAEVRAENEMVEEFVREQMGISSIDEEEIPKMPSEEQAGLVDKLKAKWGDVNCRYQLLVHQTFFDN-GRLVAKARLERELDEIEEYIAKLTKGPVTVV 687
            K  V + +E+P MGL  +KNF+T+NAVEAIL VP NR   ++ P  Y  K DFG+VP+YL  VK E+  ENEM+EEFVR+   I +  E ++  +  +E+A L+  LKAKW  VN +YQ L H   FD  G++  K   E+EL ++E+ I  L+KG V +V
Sbjct:  103 KAAVVKADEKPVMGLKTSKNFITANAVEAILDVPGNRARAKKEPPVYRHKPDFGKVPEYLGEVKQEIEQENEMIEEFVRQNKNILADQEPKVEPLDDDERAKLISALKAKWDHVNQKYQKLCHNVSFDTQGKVRRKETYEKELTQLEKDIELLSKGGVAIV 263          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs9744.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Enkurin5.890e-8374.21domain-containing protein n=1 Tax=Ectocarpus silic... [more]
Hypothetical8.100e-3848.41protein n=1 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
Uncharacterized1.660e-3649.69protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
Enkurin3.700e-3646.58domain-containing protein n=5 Tax=Aphanomyces asta... [more]
Enkurin6.190e-3646.63domain-containing protein n=1 Tax=Phytophthora meg... [more]
Enkurin7.330e-3646.88domain-containing protein n=2 Tax=Aphanomyces inva... [more]
Enkurin1.040e-3545.10domain-containing protein (Fragment) n=1 Tax=Aureo... [more]
Enkurin1.060e-3546.88domain-containing protein n=1 Tax=Aphanomyces eute... [more]
Aste57867_188281.450e-3547.50protein n=1 Tax=Aphanomyces stellatus TaxID=120398... [more]
Enkurin1.630e-3445.96domain-containing protein n=3 Tax=Saprolegniaceae ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs9744contigH-canaliculatus_M_contigs9744:240..3166 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G0N0
Preferred nameENKUR
PFAMsEnkurin
Model size718
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0001669,GO:0003674,GO:0005488,GO:0005515,GO:0005516,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005929,GO:0012505,GO:0030141,GO:0031410,GO:0031514,GO:0031982,GO:0036126,GO:0042995,GO:0043226,GO:0043227,GO:0043229,GO:0044422,GO:0044424,GO:0044441,GO:0044444,GO:0044463,GO:0044464,GO:0097223,GO:0097228,GO:0097708,GO:0097729,GO:0099503,GO:0120025,GO:0120038
Exons5
Evalue6.69e-52
EggNOG OGs28KS9@1|root,2QT8E@2759|Eukaryota
Ec32 ortholog descriptionEnkurin
Ec32 orthologEc-07_001480.1
DescriptionEnkurin, TRPC channel interacting protein
Cds size441
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs9744.1.1prot_H-canaliculatus_M_contigs9744.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs9744 688..3141 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854224.9275165-UTR-H-canaliculatus_M_contigs9744:239..4511696854224.9275165-UTR-H-canaliculatus_M_contigs9744:239..451Hapterophycus canaliculatus Oshoro7m maleUTRH-canaliculatus_M_contigs9744 240..451 +
1696854224.939087-UTR-H-canaliculatus_M_contigs9744:647..6871696854224.939087-UTR-H-canaliculatus_M_contigs9744:647..687Hapterophycus canaliculatus Oshoro7m maleUTRH-canaliculatus_M_contigs9744 648..687 +
1696854224.994355-UTR-H-canaliculatus_M_contigs9744:3141..31661696854224.994355-UTR-H-canaliculatus_M_contigs9744:3141..3166Hapterophycus canaliculatus Oshoro7m maleUTRH-canaliculatus_M_contigs9744 3142..3166 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854224.9511201-CDS-H-canaliculatus_M_contigs9744:687..8131696854224.9511201-CDS-H-canaliculatus_M_contigs9744:687..813Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9744 688..813 +
1696854224.9616475-CDS-H-canaliculatus_M_contigs9744:1371..14671696854224.9616475-CDS-H-canaliculatus_M_contigs9744:1371..1467Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9744 1372..1467 +
1696854224.9734237-CDS-H-canaliculatus_M_contigs9744:2351..24341696854224.9734237-CDS-H-canaliculatus_M_contigs9744:2351..2434Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9744 2352..2434 +
1696854224.9835503-CDS-H-canaliculatus_M_contigs9744:3005..31411696854224.9835503-CDS-H-canaliculatus_M_contigs9744:3005..3141Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9744 3006..3141 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs9744.1.1

>prot_H-canaliculatus_M_contigs9744.1.1 ID=prot_H-canaliculatus_M_contigs9744.1.1|Name=mRNA_H-canaliculatus_M_contigs9744.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=147bp
MGLYCAKNFVTSNAVEAILAVPVNRRQLPIDYLKKEDFGRVPDYLAHVKA
EVRAENEMVEEFVREQMGISSIDEEEIPKMPSEEQAGLVDKLKAKWGDVN
CRYQLLVHQTFFDNGRLVAKARLERELDEIEEYIAKLTKGPVTVVP*
back to top

mRNA from alignment at H-canaliculatus_M_contigs9744:240..3166+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs9744.1.1 ID=mRNA_H-canaliculatus_M_contigs9744.1.1|Name=mRNA_H-canaliculatus_M_contigs9744.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=2927bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9744:240..3166+ (Hapterophycus canaliculatus Oshoro7m male)
GGAATCAAAGAGGGGAAGCGATCAACGGATCCGAGAAACTTCTTGCGGGT CGGAGAAGGGATAGAAGCTAGGAGGAGGGCCGGAAAGCGGCCGGATCTTC CACGACTCGGCATTTACGGTCTTCCTCGAGGAGGGAGCGCCGGCAGCCGC GGAGGGAGAGGGGCGAACGGAGTGACGGGGGTGGATCGTGGTTTGCAACC ACTGCTTGCCAGGTCAAGCGAAAACGGGCACCTCGTTCATAGGGATGTCC CCGCGATCGGCAATGTTGGGTCAGGGTCGGCATCTTTGTTGGTGACGTCG CTGTTTTGGTCGTCGTGCCCTGGTGGGCTATAGACAGGATGAATCGGTCG GACTTGCTTCGCTGTGTCTGAATGTCACTACACGGTCGTGGCGTTCTTGA AAACACAGGCTGAAACCACCAGTCCCTCGGAGAGAAGAGCGGCCGACGAT GGGCCTGTACTGCGCCAAGAATTTCGTCACCTCCAACGCCGTAGAGGCTA TCCTTGCCGTGCCTGTGAACCGTCGCCAGCTGCCGATCGACTACCTCAAG AAGGAGGACTTTGGTAGGGTTCCGGTGAGCTGTGCTGCGGCATATACTCC TTGGGGAGAGAGGGGCAGAGAGACGGGGAAGCGGGAGGGGTGTAGGGATA GAGAACTGAGAGGTATGTGGAAACGAACAGGGAGACAAGGGGTAGGTGGG CGGACAGAGACAAACAGGCAGACAAACAGGAAGATGAGGAGGAGAAAGAG CGATGGTAGCGTATCGCACGGGGATAGATGGTGGTAGTTGTACGCCACCA TTCTAAGGTCCAAGGTGTACTTCAGTTGTGAGAGAAAGCGAGAGAGATAG AGACCAAGACCGGTACCGAGATAAAGCATCGCAATGACGACGCTTGATCT TGCATTGGGTCCCTCACTACCTTCGTCTCATCTCTGACCCCTCGACTAGA AGAATGTCAGAGGACTAAAGGTGTCGGTTGAGGAAGAACGCCCGACGCTT TTGGCCAGCTGCTAGTAAAATTTTCGAGAAGGCGACAGCGAGAATCTGCT ACCAACTGCCACCCTAAAATTGTTCTTCTACCGTATGTATCTCCTTAAGC TCGACATGTCGTGCGTTTGTTCTTTGCGGCAGGACTATCTGGCACACGTC AAGGCTGAAGTCCGAGCAGAAAACGAAATGGTGGAGGAGTTCGTGCGGGA GCAAATGGGTATCAGCTCGATCGACGAGGTGAGATAGCACGCATGGTTTT CCTTCAGAAAAAACTTTCAACGTGCATAGAATTTTCGGATTGTGTGCGCG GGAAGAGGGGGAATCTGTAATGACGTGGAGCAATCCGTTCTTTGTTTGCG GCCGTAATACAAGTACGTACACAGGGGAGACGCAAAAAGAAGATGGGTGC TACGATGTGTTTCTGCGAACTCCGGCACGCATGGCTACCGTAATGGCGTC ACGTTTTCGAAGTTGTCTTTGGGGAAGAGGCGTGGAGGTTGTCGGTATGG TGCTGGCATTTTGGGGAGGACCGGTCTGCGTTGGCCCGCCGTCATGACGC TATCCGCGTTCGGGACCAACGCTTGAGAACGCGCGCTTGAAGTTCACCAG AAGCAGCGAGGAAGCCCGAGGTATTTTTGGCAAGGTCGACGGAGGACTGA AACAAGGCGGTCCCGTGTGCTGCTGGCACCGCAGCATTCATGCTGTCTAT GCGTGATCCATTGACTTGTATCAACTCTGAGGTTTGTTTGTCACTGACCA CCGCATGTTGGCGAGAACGATGCCACACCATTTGACCGGCAACACCAGCC TATGCCCTCATGCGTCCGTCCGATTCCAACCCTTACCGTCCCTTACGTAC GCCTGGCCTTCCGGAATCGTAGAGAGAAATAAATGGGTTCTCTTGTGGGA CCTACCATCACGTAGACCGACCATTAGCGGACGCGAAATCGAAGGCGTAA GCGAAAGGCCAACTCCTGAGAGAGTTCTTCTTTAAATAGAAGACGAGGGA TGGCTGCCGTAGACAGCAAGGGGGTCGAAAACTGTCGAAATCTAGCTTCT GTACATCAACATACACCGCAGAAATCACTCCGAATACATCCGGCTTCTTG TGCATACCTCAGGAGGAAATCCCGAAGATGCCGAGCGAAGAGCAGGCGGG CTTGGTCGACAAGCTTAAGGCCAAATGGGGCGATGTAAATTGCAGGTAGG TTTCTACTTCTCGTGCGCCCATTGCTCAATGGCATGACGTTGCACACAAG GCGTGGGGAAGTTCAAGGTAATGCTGCGCTTGGTTTCAGTGGCGGTGCAG AACGATAGAGAGGGTTAGGAATAGGGTAGTGACGGCAACGCTGACAACAG CAAAAGAAGCAGCAGCTACAGGAAAATAATGACATCGAGGGCAACAGAAC CAGTAGTAGAAGCAATAGCAGCTGCGACAGTGACGCCATTGAACCGAAAA AACAAACAGGCTCCCGCGCCATTGTAAACGACCAGCCTCTCATTCTGTTG TGAGATTTTTACGAGCTTCGAAATTTTTTGACACTCTTGAAAATAACTAT GATGTCTTGCGCCTGCAAGTATTCCGCGAAAAGCATCAAGATTGGCAACA TTTCCATAGCGTTCATCTCGAGAATCCCCCACTTCAACTTGCCCTGTACC CCGAATCGTCCGCTTCCCGTGACAGAGACCACATTGCAAAACGTGAGGTA TCCCACGCGTACCCACCCAACCTCCGACCAACCTTTGATGTCTTCGCACC CCACAACGACACGTAGATATCAGCTTTTGGTGCACCAGACGTTTTTTGAT AACGGGCGCCTGGTCGCCAAGGCACGCTTGGAACGGGAGCTAGACGAGAT CGAGGAATACATCGCGAAGCTCACCAAAGGGCCCGTTACCGTGGTCCCGT AATAAATTTCCAGAGATGAAGCACGCC
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs9744:240..3166+

>mRNA_H-canaliculatus_M_contigs9744.1.1 ID=mRNA_H-canaliculatus_M_contigs9744.1.1|Name=mRNA_H-canaliculatus_M_contigs9744.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=441bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9744:240..3166+ (Hapterophycus canaliculatus Oshoro7m male)
ATGGGCCTGTACTGCGCCAAGAATTTCGTCACCTCCAACGCCGTAGAGGC
TATCCTTGCCGTGCCTGTGAACCGTCGCCAGCTGCCGATCGACTACCTCA
AGAAGGAGGACTTTGGTAGGGTTCCGGACTATCTGGCACACGTCAAGGCT
GAAGTCCGAGCAGAAAACGAAATGGTGGAGGAGTTCGTGCGGGAGCAAAT
GGGTATCAGCTCGATCGACGAGGAGGAAATCCCGAAGATGCCGAGCGAAG
AGCAGGCGGGCTTGGTCGACAAGCTTAAGGCCAAATGGGGCGATGTAAAT
TGCAGATATCAGCTTTTGGTGCACCAGACGTTTTTTGATAACGGGCGCCT
GGTCGCCAAGGCACGCTTGGAACGGGAGCTAGACGAGATCGAGGAATACA
TCGCGAAGCTCACCAAAGGGCCCGTTACCGTGGTCCCGTAA
back to top