mRNA_H-canaliculatus_M_contigs9730.1.2 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs9730.1.2 vs.
Match: Pseudouridine (synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFM8_ECTSI) HSP 1 Score: 654 bits (1687), Expect = 1.950e-233 Identity = 335/386 (86.79%), Postives = 351/386 (90.93%), Query Frame = 1
Query: 1 RCNAVGASSAVAKDVAPEEEVEEEIEFNAEMLTVADGEGGKRLDSFLAARMPEQSRSYFGGLCQLGMVLVGGKRVKKSIKVEEGQEVEVRFIVSPELSIEGEDIPLDILYEDEEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEKGAADGGG-GVAEAVFQPMPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAERRVGDFVISVSAVVDISKSYLAVCVGNPGNAATIDVPIGRHPRDRQRMVAVPTIQPNIRSRRALSVVTTVAFDGKLSIAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNKDWNRRLQQSTGMTRPLLHARSLEFKHPTTGEVVSLVAPLPADIEAVVRRIYPQVEDEHPEWLGTTTS 1155
RCNA A+ A A+DVAPEEEVEEEI FN EMLTV +GEGGKRLDSFL ARMPEQSRSYFGGLCQLGMVLVGGK KKS+KVEEGQEVEVRFI+SPELS++GEDIPLDILYED+EIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEK ADG G GVAEA FQ +PDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFA+RR ISKSYLAVCVGNPG AATIDVPIGRHPRDRQRMVAVPTIQPNIRSRRALSVVTTVAFDGKLS+AEVSIETGRTHQIRVHLQHRRTPVLGDEVYGN DWNRRL+QSTG+TRPLLHARSLEFKHP TGEVVSL APLP+D+EAVVRRIYPQVEDEHPEWL TT+
Sbjct: 75 RCNAGSAALAAARDVAPEEEVEEEIAFNTEMLTVEEGEGGKRLDSFLGARMPEQSRSYFGGLCQLGMVLVGGKTAKKSVKVEEGQEVEVRFIISPELSLQGEDIPLDILYEDDEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEKSGADGNGLGVAEAAFQSVPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRR-------------ISKSYLAVCVGNPGKAATIDVPIGRHPRDRQRMVAVPTIQPNIRSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNNDWNRRLRQSTGLTRPLLHARSLEFKHPNTGEVVSLAAPLPSDVEAVVRRIYPQVEDEHPEWLQDTTA 447
BLAST of mRNA_H-canaliculatus_M_contigs9730.1.2 vs.
Match: Pseudouridine (synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH15_9STRA) HSP 1 Score: 387 bits (993), Expect = 2.930e-129 Identity = 206/361 (57.06%), Postives = 260/361 (72.02%), Query Frame = 1
Query: 64 EEEIEFNAEMLTVADGEGGKRLDSFLAARMPEQSRSYFGGLCQLGMVLVGGKR-VKKSIKVEEGQEVEVRFIVSPELSIEGEDIPLDILYEDEEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEKGAADGGGGVAEAVFQPMPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAERRVGDFVISVSAVVDISKSYLAVCVGNPGNAATIDVPIGRHPRDRQRMVAVPTIQPNIRSRRALSVVTTVAFDGKLSIAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNKDWNRRLQQSTGMTRPLLHARSLEFKHPTTGEVVSLVAPLPADIEAVVRRIYPQVEDEHPEWLG 1143
E+EI F+ + + G+R+D+FL +++P+QSR+YFG LC G V V G VKKS KV GQ + VRF+ + EL++ EDIPLD+++ED E++A++KP GMVVHPAPG+WNGTFVNAL+ HL K DG +V G+ LRPG+VHRLDKGT+GVLLAAK P MQ +L++LF +R+V K+YLAVC GNPG+ A IDVPIGRH +RQ+MVAVP IQP R+RRALS V AFDG LS+AEV IETGRTHQIRVHLQHRRTP++GDE+YGN+DWNRRLQ+ G++RPLLHA LEF HPTTG + L APLP D+ ++VR +YP +EHP W G
Sbjct: 47 EDEI-FDVSVFEADLADAGQRIDAFLCSKVPDQSRTYFGDLCTKGCVCVNGSSAVKKSHKVTAGQIISVRFLATAELNLGPEDIPLDVIFEDSELLAIAKPPGMVVHPAPGNWNGTFVNALLHHLSK---DG------SVVSLGESGD----LRPGVVHRLDKGTSGVLLAAKTPIMQKQLSQLFHDRKV-------------RKTYLAVCAGNPGDDA-IDVPIGRHATNRQKMVAVPDIQPGARARRALSHVRCTAFDGSLSVAEVRIETGRTHQIRVHLQHRRTPIVGDELYGNRDWNRRLQKR-GISRPLLHALRLEFTHPTTGAALRLEAPLPEDMASIVRGVYPVAIEEHPGWFG 378
BLAST of mRNA_H-canaliculatus_M_contigs9730.1.2 vs.
Match: Pseudouridine (synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXK7_HETAK) HSP 1 Score: 364 bits (935), Expect = 1.620e-120 Identity = 198/359 (55.15%), Postives = 242/359 (67.41%), Query Frame = 1
Query: 76 EFNAEMLTVADGEGGKRLDSFLAARMPEQSRSYFGGLCQLGMVLVGGKRVKKSIKVEEGQEVEVRFIVSPELSIEGEDIPLDILYEDEEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEKGAAD---GGGGVAEAVFQPMPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAERRVGDFVISVSAVVDISKSYLAVCVGNPGNAATIDVPIGRHPRDRQRMVAVPTIQPNI-RSRRALSVVTTVAFDGKLSIAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNKDWNRRLQQSTGMTRPLLHARSLEFKHPTTGEVVSLVAPLPADIEAVVRRIYPQVEDEHPEWL 1140
+ E + V + KRLD+FL+ PEQSRSYFG LCQ G+V VGG+ VKKS K+ GQEV V F+ + E++ E EDIPLDILYEDE +IAV+KP GMVVHPAPGSW+GTF NAL FH+ D GGG A LRPGIVHRLDKGT+GVLLA+KN AKL+E+FA R+ I K+YLAVCVGNPG I+ I RHP++RQ+M + Q R+R A+++V ++FD +LS+A V IETGRTHQIRVHL HRRTPVLGDE+YGN D NRR + G+ RPLLHA LE HP TGE +SL AP+P D+ V+ +IYPQVEDE P+ L
Sbjct: 63 DLQEETVIVGEEYNKKRLDAFLSDEFPEQSRSYFGSLCQQGLVRVGGRAVKKSEKLRAGQEVSVAFLPTAEMAAEPEDIPLDILYEDEHLIAVAKPPGMVVHPAPGSWSGTFANALAFHMRSRGEDYRAAGGGDA---------------LRPGIVHRLDKGTSGVLLASKNSQCHAKLSEMFASRK-------------IKKTYLAVCVGNPGQDVKIENLIARHPKNRQKMCVIHETQEGAARARTAVTLVDGLSFDSQLSLARVQIETGRTHQIRVHLAHRRTPVLGDELYGNGDQNRRAVKRFGLQRPLLHAYQLELDHPITGEPLSLKAPVPEDMVRVLAKIYPQVEDEQPDML 393
BLAST of mRNA_H-canaliculatus_M_contigs9730.1.2 vs.
Match: PseudoU_synth_2 (domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAN8_9STRA) HSP 1 Score: 293 bits (751), Expect = 1.790e-91 Identity = 185/428 (43.22%), Postives = 235/428 (54.91%), Query Frame = 1
Query: 67 EEIEFNAEMLTVAD-GEGGKRLDSFLAARMPEQSRSYFGGLCQLGMVLVGGKRVKKSIKVEEGQEVEVRFIVSPE--LSIEGEDIPLDILYEDEEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEKGAADGGGGVAEAVFQPMPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAERRVGDFVISVSAVVDISKSYLAVCVGNPGN-AATIDVPIGRHPRDRQRMVAVPTIQPN--------------------------------------------------IRSRRALSVVTTVAFDGKLSIAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNKDWNRRLQQSTGMTRPLLHARSLEFKHPTTGEVVSLVAPLPADIEAVVRRIYPQVED-EHPEWLGTTTSATAAGEEDQT 1185
+E A+ + VA+ E R+D FL R+ SRS L G V V G +KS+K+ EG E+ V + E +E EDIPLD+LYEDE +IAV+K GMVVHPAPG+ NGTFVNAL+ H+ + GG + E V RPG+VHRLDKGT+GVLLAAK A L+ FAERRV +K+YLA+ +GNP + A IDVPIGRHPRDRQRM + + + R+A S V T+AFDG+LS+ EV IETGRTHQIRVHLQHRR PVLGDE+YGN WN R ++ G+TRP+LHA L HP TG+ + LVAP+P D+ +V I+PQV+ E+ EW +AG+E T
Sbjct: 76 DEANITAQFIFVANTSESLIRVDRFLTQRLKGHSRSSVCDLLDRGFVYVNGSPARKSLKIVEGDEIFVLQCATNERLAEVEEEDIPLDVLYEDEHVIAVNKAPGMVVHPAPGNRNGTFVNALLAHVARR----GGEIEEVV---------GSEGRPGVVHRLDKGTSGVLLAAKTARAHAALSSAFAERRV-------------NKTYLAISIGNPSSQGAVIDVPIGRHPRDRQRMAVAMQARTSHTSSFPGASNAQDAVLNYDGYSEDYQEIGYNSTEGEELLMGRGGNSGNTPLTGRKARSTVKTLAFDGRLSVVEVGIETGRTHQIRVHLQHRRNPVLGDELYGNAQWNARARRRWGVTRPMLHALRLVVDHPVTGDPLRLVAPVPPDMLSVAHGIWPQVKGRENEEWWDMVDRGPSAGDEGMT 477
BLAST of mRNA_H-canaliculatus_M_contigs9730.1.2 vs.
Match: Hypothetical (protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JE35_9STRA) HSP 1 Score: 288 bits (736), Expect = 3.980e-89 Identity = 180/385 (46.75%), Postives = 220/385 (57.14%), Query Frame = 1
Query: 118 GKRLDSFLAARMPEQSRSYFGGLCQLGMVLVGGKR---------VKKSIKVEEGQEVEVRFIV--SPELSIEGEDIPLDILYEDEEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEKGAADGGG---------------GVAEAVFQPMPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAERRVGDFVISVSAVVDISKSYLAVCVGNPGNAATIDVPIGRHPRDRQRMVAVPTIQ-----------------PNIRSRRALSVVTTVAFDGKLSIAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNKDWNRRLQQSTGMTRPLLHARSLEFKHPTTGEVVSLVAPLPADIEAVVRRIYPQVEDEHPEWLG 1143
G R+D+ L A P+ SRS G L G+V V G +KS KV G + VR I +PE I +DIPLD+L+EDE +I ++K AGMVVHPA G+W+GT VNAL +L K ++ G G G AV DGE RPG+VHRLDKGTTGVL+ AK A L+E FA+RR K+Y+ V VGNPG TID PIGRHP RQRM VP P+ RRALS V T+AFDG+LS+AEV IETGRTHQIRVHLQ RRTPV GD+VYG DWN+RL ++ + RPLLHA LE HP TGE ++ APL D+ +V I+PQ +E P+ G
Sbjct: 150 GSRIDAALGALDPDLSRSLCGTLVSDGLVSVAGVSGGDGTPEVVTRKSHKVSGGDVLAVRRIPDETPE-EIVPQDIPLDVLFEDEHMIVLNKAAGMVVHPAAGNWDGTVVNALAHYLAKVSSHGAGDFVLPEGGTTAEEEDGALGAVLVEGTDGEAQ-KFRPGVVHRLDKGTTGVLVVAKTREALAALSESFAQRRA-------------KKAYVTVTVGNPGKRVTIDRPIGRHPTHRQRMRVVPEPSRKDLIGRRPAPGAPPRTPSQAGRRALSFVDTLAFDGRLSVAEVRIETGRTHQIRVHLQDRRTPVYGDDVYGLPDWNKRLAKTHSVERPLLHAAKLEIDHPVTGERLTFRAPLAQDMAKIVDGIWPQGREERPDLFG 519
BLAST of mRNA_H-canaliculatus_M_contigs9730.1.2 vs.
Match: Pseudouridine (synthase n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A7X5TFN1_9BACT) HSP 1 Score: 280 bits (716), Expect = 7.370e-89 Identity = 151/340 (44.41%), Postives = 214/340 (62.94%), Query Frame = 1
Query: 88 EMLTVADGEGGKRLDSFLAARMPE-QSRSYFGGLCQLGMVLVGGKRVKKSIKVEEGQEVEVRFIVSPELSIEGEDIPLDILYEDEEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEKGAADGGGGVAEAVFQPMPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAERRVGDFVISVSAVVDISKSYLAVCVGNPGNAATIDVPIGRHPRDRQRMVAVPTIQPNIRSRRALSVVTTVAFDGKLSIAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNKDWNRRLQQSTGMTRPLLHARSLEFKHPTTGEVVSLVAPLPADIEAVVRRI 1104
E + + + E G+RLD LA R E +SR+YF L + VL+ G +KK +K + G EVE+ F+++PE+ + E IPLD+LYEDE+I+ V+KP+GMVVHPAPG+W+GTFVNAL++H + Q D +H LRPGIVHRLDK T+GVL++AK Q +L E+FA R ++ K YLA+C+G+PG I++PIGRHP+ RQRM + + R A ++ T+A DG LS+ ++ + TGRTHQIRVH+QH TPVLGD YGN N++ + +TR LLHAR + F HP T + VA +P+D+ ++R+
Sbjct: 7 ETIIITEDEAGQRLDKILANRFKEVRSRTYFQSLIRDHNVLLNGSPIKKQVKPQVGDEVEILFVLTPEIDVTPEPIPLDVLYEDEDILVVNKPSGMVVHPAPGNWSGTFVNALLYHCK---------------QLPSDSQH---LRPGIVHRLDKETSGVLVSAKTSQAQQRLVEMFASR-------------EVYKEYLAICLGDPGEGE-INLPIGRHPKQRQRMTVLDS-----GGRNARTIFRTLASDGTLSLVDIILATGRTHQIRVHMQHHGTPVLGDSTYGNIQANKKFK----VTRQLLHARKIRFTHPITKREMEFVAEIPSDMATFIQRL 305
BLAST of mRNA_H-canaliculatus_M_contigs9730.1.2 vs.
Match: Pseudouridine (synthase n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7V9UFC7_9BACT) HSP 1 Score: 280 bits (715), Expect = 1.390e-88 Identity = 153/337 (45.40%), Postives = 215/337 (63.80%), Query Frame = 1
Query: 94 LTVADGEGGKRLDSFLAARMPE-QSRSYFGGLCQLGMVLVGGKRVKKSIKVEEGQEVEVRFIVSPELSIEGEDIPLDILYEDEEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEKGAADGGGGVAEAVFQPMPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAERRVGDFVISVSAVVDISKSYLAVCVGNPGNAATIDVPIGRHPRDRQRMVAVPTIQPNIRSRRALSVVTTVAFDGKLSIAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNKDWNRRLQQSTGMTRPLLHARSLEFKHPTTGEVVSLVAPLPADIEAVVRR 1101
+ +++ E G+RLD LA R E +SR+YF L + VLV G++VKK K E G EVEV FI++PE++++ E+IPLDI+YED+ II ++KPAGMVVHPA G+W GTFVNAL++H ++ + + +LRPGIVHRLDK TTG+LLAAK Q KL ELF+ R+ I K Y A+CVG PG+ TID PIGRHP R+ M +P ++A+S+ T+ ++ +LS + + TGRTHQIRVHL+H TPVLGD +YG++ R + + R +LHA L+F+HPTTG+++ APLP ++E ++ R
Sbjct: 8 IIISETEAGQRLDKILADRFKELKSRTYFQYLIEEQKVLVNGEQVKKRFKPEFGDEVEVHFILTPEITLQAENIPLDIIYEDDSIILINKPAGMVVHPAAGNWTGTFVNALLYHCQE------------IEKLSRSANSTGNLRPGIVHRLDKETTGLLLAAKTEEAQRKLVELFSNRK-------------IIKEYRAICVGKPGDI-TIDQPIGRHPVQRKMMTVLPH-----GGKKAISICKTLNYNSELSFVNIVLVTGRTHQIRVHLKHLNTPVLGDIIYGSE----RANSTFNVNRQMLHAHYLQFEHPTTGKLLEFYAPLPQEMEQILVR 309
BLAST of mRNA_H-canaliculatus_M_contigs9730.1.2 vs.
Match: Pseudouridine (synthase n=1 Tax=Waddliaceae bacterium TaxID=2026802 RepID=A0A2E3M0J3_9BACT) HSP 1 Score: 279 bits (713), Expect = 1.770e-88 Identity = 154/336 (45.83%), Postives = 210/336 (62.50%), Query Frame = 1
Query: 100 VADGEGGKRLDSFLAARMPEQSRSYFGGLCQLGMVLVGGKRVKKSIKVEEGQEVEVRFIVSPELSIEGEDIPLDILYEDEEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEKGAADGGGGVAEAVFQPMPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAERRVGDFVISVSAVVDISKSYLAVCVGNPGNAATIDVPIGRHPRDRQRMVAVPTIQPNIRSRRALSVVTTVAFDGKLSIAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNKDWNRRLQQSTGMTRPLLHARSLEFKHPTTGEVVSLVAPLPADIEAVVRRIY 1107
V + E G+RLD L+ R EQSR+YF L +VLV G+ V+K ++ EVEV FI+SPELS+E EDIPLDI+YEDE ++A++KPAG+VVHP G+W+GTF NAL++H ++ +PD LRPGIVHRLDK T+G+LLAAK Q L ELF+ R+ I K Y A+C+GNPGN I+ PIGRHP R++M + + R A ++ T+AF+GKLS+ ++ +ETGRTHQIRVH+ H TP+LGDE YG K N++ + + R LLHA+ LE +HP T + + L A LP D + +I+
Sbjct: 11 VTEEEAGERLDKVLSKRYTEQSRTYFQYLITEKLVLVNGEPVRKRTALQTNDEVEVEFILSPELSLEPEDIPLDIVYEDEYLLAINKPAGLVVHPGAGNWSGTFANALLYHCKQ----------------VPDA--GDQLRPGIVHRLDKDTSGLLLAAKTNMSQQALVELFSSRK-------------IYKEYWAICLGNPGNGR-IEAPIGRHPIHRKKMAVIES------GRSASTIYETIAFNGKLSLVKLILETGRTHQIRVHMLHLGTPILGDETYGRKQMNQKYK----INRQLLHAKHLELEHPITKKNLKLEASLPEDFSKITEQIH 304
BLAST of mRNA_H-canaliculatus_M_contigs9730.1.2 vs.
Match: Pseudouridine (synthase n=1 Tax=Chlamydiales bacterium SCGC AG-110-P3 TaxID=1871323 RepID=A0A212KRQ0_9CHLA) HSP 1 Score: 278 bits (710), Expect = 1.020e-87 Identity = 156/338 (46.15%), Postives = 215/338 (63.61%), Query Frame = 1
Query: 94 LTVADGEGGKRLDSFLAARMP-EQSRSYFGGLCQLGMVLVGGKRVKKSIKVEEGQEVEVRFIVSPELSIEGEDIPLDILYEDEEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEKGAADGGGGVAEAVFQPMPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAERRVGDFVISVSAVVDISKSYLAVCVGNPGNAATIDVPIGRHPRDRQRMVAVPTIQPNIRSRRALSVVTTVAFDGKLSIAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNKDWNRRLQQSTGMTRPLLHARSLEFKHPTTGEVVSLVAPLPADIEAVVRRI 1104
V+D E G RLD L+ R +QSRSYF L + +VL+ G+ VKK ++ E G EVEV F ++PE+++ E++PL++LYED+ +I ++K AGMVVHPAPG+W GTFVNAL++H G AEA SLRPGIVHRLDK T+G L+AAKN +Q +L ELF+ R+ I K Y+AVCVGNPG+ T+DVPIGRHP R++M + + R A++ +T+A +LS+ ++ +ETGRTHQIRVHL+HR P+LGD VYG + NR+ S R +LHA L F HP TGE + ++AP+P D+ + R+
Sbjct: 24 FVVSDSEAGSRLDKLLSQRYQGQQSRSYFQKLIRNELVLLNGRPVKKQVRPESGDEVEVEFALTPEVNLHPENLPLEVLYEDDHLIIINKSAGMVVHPAPGNWTGTFVNALLYHC------GDSFQAEA------------SLRPGIVHRLDKNTSGCLVAAKNLHVQQRLVELFSLRK-------------IYKEYIAVCVGNPGDG-TVDVPIGRHPVHRKQMAVIES-----GGRHAVTHYSTLAHKDRLSVVKLVLETGRTHQIRVHLRHRGMPILGDCVYGTEAMNRQYSAS----RQMLHAYRLRFMHPITGEKLDVMAPIPVDMRLQIARV 320
BLAST of mRNA_H-canaliculatus_M_contigs9730.1.2 vs.
Match: Pseudouridine (synthase n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7W1U2J2_9BACT) HSP 1 Score: 276 bits (705), Expect = 2.940e-87 Identity = 160/340 (47.06%), Postives = 210/340 (61.76%), Query Frame = 1
Query: 88 EMLTVADGEGGKRLDSFLAARMPE-QSRSYFGGLCQLGMVLVGGKRVKKSIKVEEGQEVEVRFIVSPELSIEGEDIPLDILYEDEEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEKGAADGGGGVAEAVFQPMPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAERRVGDFVISVSAVVDISKSYLAVCVGNPGNAATIDVPIGRHPRDRQRMVAVPTIQPNIRSRRALSVVTTVAFDGKLSIAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNKDWNRRLQQSTGMTRPLLHARSLEFKHPTTGEVVSLVAPLPADIEAVVRRI 1104
E+L V D E G+RLD LA R +SR+YF L + G VL+ G KK IK G E++V F+++PE+ + E IPLDI++EDE IIA++KP GMVVHPA G+W GTFVNAL++H ++ + +P E +P LRPGIVHRLDK T+G+LLAAK P +L +F+ER+ I K YLAVC+GNPGN TI PIGRHP R+ M V T +P I +AL V K+S+ V +ETGRTHQIRVH +HR TP+LGD VYG++ NR G+ R LLHA L+F HP V L AP+P+D++A ++
Sbjct: 5 ELLVVQDEEAGERLDKILARRFDGIKSRTYFQMLIEEGHVLLNGLSAKKRIKPTAGDEIQVNFVLTPEIGLSPEAIPLDIIFEDEHIIAINKPVGMVVHPAVGNWTGTFVNALLYHCQQ------------LGLSLP--ESSP-LRPGIVHRLDKDTSGLLLAAKTPLAHQRLVAMFSERK-------------IHKEYLAVCLGNPGNL-TISAPIGRHPVHRKLMSVVETGKPAISHLKALEV------KEKISLVRVILETGRTHQIRVHFKHRGTPILGDAVYGSESANREY----GIHRQLLHAHRLQFMHPIHNTPVELTAPIPSDLKAFFPKV 305 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs9730.1.2 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs9730.1.2 >prot_H-canaliculatus_M_contigs9730.1.2 ID=prot_H-canaliculatus_M_contigs9730.1.2|Name=mRNA_H-canaliculatus_M_contigs9730.1.2|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=400bp RCNAVGASSAVAKDVAPEEEVEEEIEFNAEMLTVADGEGGKRLDSFLAARback to top mRNA from alignment at H-canaliculatus_M_contigs9730:176..4648+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs9730.1.2 ID=mRNA_H-canaliculatus_M_contigs9730.1.2|Name=mRNA_H-canaliculatus_M_contigs9730.1.2|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=4473bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9730:176..4648+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs9730:176..4648+ >mRNA_H-canaliculatus_M_contigs9730.1.2 ID=mRNA_H-canaliculatus_M_contigs9730.1.2|Name=mRNA_H-canaliculatus_M_contigs9730.1.2|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=1200bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9730:176..4648+ (Hapterophycus canaliculatus Oshoro7m male)back to top |