mRNA_H-canaliculatus_M_contigs9704.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs9704.1.1
Unique NamemRNA_H-canaliculatus_M_contigs9704.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs9704.1.1 vs.
Match: Similar (to SET domain, bifurcated 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM06_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 1.610e-21
Identity = 50/77 (64.94%), Postives = 56/77 (72.73%), Query Frame = 1 
Query:  829 FEWDRRHFSDGAAGGRVTFSIDDLSRGLESVSVHVCNDEDEEKLPYFRYVTGYVMGGDVQQNMDVDAMVCCDCTDGC 1059
            F+WDRR              I+DLSRGLE+V + VCN+EDEEKLP+FRYVTGYVMGGDV Q  D D MVCCDCTDGC
Sbjct:  288 FQWDRRQL------------INDLSRGLENVKIQVCNEEDEEKLPFFRYVTGYVMGGDVHQKKDPDDMVCCDCTDGC 352
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs9704.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Similar1.610e-2164.94to SET domain, bifurcated 1 n=1 Tax=Ectocarpus sil... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs9704contigH-canaliculatus_M_contigs9704:1..4480 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FM06
Preferred nameSETDB2
PFAMsMBD,Pre-SET,SET
Model size1059
Max annot lvl2759|Eukaryota
KEGG rclassRC00003,RC00060,RC00181,RC00496
KEGG koko:K09097,ko:K10779,ko:K11421,ko:K18494,ko:K18626,ko:K18655
KEGG ReactionR03875,R03938,R04866,R04867
KEGG Pathwayko00310,ko04066,ko04550,ko04934,ko05200,ko05204,ko05211,map00310,map04066,map04550,map04934,map05200,map05204,map05211
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000122,GO:0000278,GO:0001501,GO:0001701,GO:0001824,GO:0001832,GO:0001833,GO:0001947,GO:0002009,GO:0003002,GO:0003006,GO:0003007,GO:0003143,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005700,GO:0005737,GO:0005829,GO:0005886,GO:0005911,GO:0006325,GO:0006355,GO:0006357,GO:0006464,GO:0006479,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0007154,GO:0007165,GO:0007264,GO:0007265,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007368,GO:0007389,GO:0007507,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008283,GO:0008356,GO:0008757,GO:0009292,GO:0009294,GO:0009506,GO:0009653,GO:0009790,GO:0009792,GO:0009798,GO:0009799,GO:0009855,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010629,GO:0010638,GO:0016020,GO:0016043,GO:0016278,GO:0016279,GO:0016569,GO:0016570,GO:0016571,GO:0016740,GO:0016741,GO:0017145,GO:0018022,GO:0018023,GO:0018024,GO:0018193,GO:0018205,GO:0019219,GO:0019222,GO:0019538,GO:0019953,GO:0022412,GO:0022414,GO:0023052,GO:0030054,GO:0030154,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031935,GO:0031937,GO:0031974,GO:0031981,GO:0032259,GO:0032501,GO:0032502,GO:0032504,GO:0033043,GO:0033044,GO:0034968,GO:0035050,GO:0035239,GO:0035295,GO:0035556,GO:0036124,GO:0036211,GO:0040007,GO:0040029,GO:0042054,GO:0042078,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044764,GO:0045892,GO:0045934,GO:0045935,GO:0046974,GO:0048132,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048562,GO:0048568,GO:0048589,GO:0048598,GO:0048609,GO:0048729,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051037,GO:0051038,GO:0051052,GO:0051054,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051276,GO:0051301,GO:0051321,GO:0051567,GO:0051704,GO:0051716,GO:0055044,GO:0060255,GO:0060348,GO:0060429,GO:0060562,GO:0060968,GO:0060972,GO:0061371,GO:0061647,GO:0065007,GO:0070013,GO:0070986,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0080090,GO:0090308,GO:0090309,GO:0097159,GO:0098722,GO:0098728,GO:0140096,GO:1901363,GO:1901564,GO:1902275,GO:1902679,GO:1903506,GO:1903507,GO:1905269,GO:1990841,GO:2000112,GO:2000113,GO:2001141,GO:2001252
Exons6
Evalue2.65e-22
EggNOG OGsCOG0553@1|root,COG2940@1|root,KOG1015@2759|Eukaryota,KOG1141@2759|Eukaryota
EC2.1.1.43,3.6.4.12,3.6.4.13
Descriptionhistone-lysine N-methyltransferase activity
Cds size1059
COG categoryK
BRITEko00000,ko00001,ko01000,ko03000,ko03019,ko03036,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs9704.1.1prot_H-canaliculatus_M_contigs9704.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs9704 1..4480 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854223.2264514-CDS-H-canaliculatus_M_contigs9704:0..271696854223.2264514-CDS-H-canaliculatus_M_contigs9704:0..27Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9704 1..27 -
1696854223.23983-CDS-H-canaliculatus_M_contigs9704:1481..15831696854223.23983-CDS-H-canaliculatus_M_contigs9704:1481..1583Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9704 1482..1583 -
1696854223.2528472-CDS-H-canaliculatus_M_contigs9704:2085..22171696854223.2528472-CDS-H-canaliculatus_M_contigs9704:2085..2217Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9704 2086..2217 -
1696854223.2690098-CDS-H-canaliculatus_M_contigs9704:2319..24781696854223.2690098-CDS-H-canaliculatus_M_contigs9704:2319..2478Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9704 2320..2478 -
1696854223.2852273-CDS-H-canaliculatus_M_contigs9704:2589..30681696854223.2852273-CDS-H-canaliculatus_M_contigs9704:2589..3068Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9704 2590..3068 -
1696854223.297261-CDS-H-canaliculatus_M_contigs9704:4320..44801696854223.297261-CDS-H-canaliculatus_M_contigs9704:4320..4480Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9704 4321..4480 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs9704.1.1

>prot_H-canaliculatus_M_contigs9704.1.1 ID=prot_H-canaliculatus_M_contigs9704.1.1|Name=mRNA_H-canaliculatus_M_contigs9704.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=353bp
MVHCSLKFKCWLCDDKPMERLRRRIPGYEHNSRSVLTSLITNNLNMVRWS
SCCDKDTKALSHIGRGSGGARPAAGTGGASKRSRPKKSARHASSSSAATD
SDRSVPPPSRRRQRQQQQQQQQQQQYRPRSPTRPGGGGGSGGSGSSWRSV
SASESEEACGSEAERGKSRSSGGGGGGPGETAATGGDISPGPPPSGPGRG
ATLMDPAPSSFDGNGRSHSGRGGGKDGEWEGVSSAPEGMSTDSSNNNDDG
GSSDNLGTGRRGSAGGGEAETPAAAGFEWDRRHFSDGAAGGRVTFSIDDL
SRGLESVSVHVCNDEDEEKLPYFRYVTGYVMGGDVQQNMDVDAMVCCDCT
DGC
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mRNA from alignment at H-canaliculatus_M_contigs9704:1..4480-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs9704.1.1 ID=mRNA_H-canaliculatus_M_contigs9704.1.1|Name=mRNA_H-canaliculatus_M_contigs9704.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=4480bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9704:1..4480- (Hapterophycus canaliculatus Oshoro7m male)
ATGGTGCACTGCAGCCTGAAGTTCAAGTGCTGGCTCTGCGACGACAAGCC
AATGGAGCGGCTCCGCAGGCGCATCCCGGGCTACGAGCACAACAGCCGGA
GCGTTCTCACGAGCCTCATCACCAACAACCTGAACATGGTGCGTTGGTCC
TCGTGTTGCGGTTGGATTTAAAGGAAATAAAAAGCATAACGACACCGTAG
GAACACCTCCTGAGGTACGTCGTGCGAAGCGGAGCTCGAGGCTTCTGTTG
AGTTCTAAACAACCAGGGTTCACTGATGTGTAGGGTTGGGACAAAAGCAT
GAACAGGAAGAGGCTTGGACGGGAGGCCTTTTTCCTTTTCGCATCCGACA
CATGCATATGCATTCACCTCCGTCGTGTCCTCAAAGTGTCTCGAATTCAT
CCCGTCTCTTCCGGACTTTTGAATAGGCAGGAGACGACCCACTGGCCGGT
CAGACGTTGATGTGTTGAAGAAAGACGTAACAACACCGTAGAACCACCTC
CTGAGGTACGCCGTGCAAGACGTGGCTCGAGGTTCCCGTTGAATCCCACA
TGCTGAGGGTTCATTGTGTCTGGCTGGGACAAAAATCCTGAACAGAAAAA
AGCTGTGAGACTCAGCGGCGGTGTATGTTTGAGTCGTCGTTTCAATCCCT
ACGGTTGCAGTTGCCAGGTATTCTGTCTTTCTTTTCAGCAGCTGTACAGT
GCTTCGAAGTGACGACGGTACGAGTGCGTGTGGGTCCTTCGAAGACAAGC
TAGCTACACAGAGGGCTAGGCTTGATTCTCGTTGTAGAAACGTCTCTCTC
GAGCGATGCCACATTTTTGTTGTTGCTGTGGCTGTTGCTGTTTTTCCCGT
ACGTCCATCTCGGGCTCCTATGGGCGTGTTCGCCTACCGCCCTGCGCCTC
CTTGAGATCTCCAGAGATCCCAAGAACTAGTTCGCCGTCTAACGTTCCGC
CTGGATTATCGAGCAAAGACTCGCGTAGCTTACTTGCGTCATGCGTGTGA
GAGCAAGACCGCAACAAGCCCCATAGTCTCGCTCGTGATCATGTAGTTGT
TGCGGGGCGGTACTCTACGCTTTGCGACGGCACGATGCGGTACGGTGGGA
CCGTACGCTGCTCATTTTCTCGCCCGTGATCATGTAATTGTTGTGGTACG
ATGGCTATGATGTAGAGTACGACGGTACGGTACGGTACGGTACGGTACGG
TACAGTACAGTACGGTACAGTACGGTGCGGTACGGTGCGGTACCACCGCG
GGCCCCTCCCTCGCCCCGCTCCGGTCTTCGCCGCGACTGTCGCCGCCGAT
ATACGATACGGCATTCTCTAGAAACCAACAATCACCGGCAATACACCGCG
TGCGATACCACCCTGCGCCGTCCAAAACCAGACCCAGGCTTCCGCTGCGG
CTTTGCCGAAAGACAAAGACACCAAGGCCTTGTCGCACATCGGGCGAGGG
AGCGGCGGCGCCCGTCCCGCTGCCGGCACCGGCGGCGCCTCCAAACGAAG
CAGACCCAAGAAGTCGGCGAGACACGCCTCCTCGAGCTCGGCGGCGACGG
ATTCGGACCGCTCCGTGCCCCCGCCGTCCCGTCGACGGCAGCGGCAACAG
CAGCAACAGCAGCAACAGCAGCAACAGTACCGCCCTCGGTCGCCGACGCG
TCCGGGGGGCGGCGGCGGCAGCGGCGGCAGCGGCAGCTCCTGGCGGAGCG
TCTCCGCTTCCGAGAGCGAAGAGGCATGCGGGAGCGAGGCCGAGCGCGGG
AAGTCGAGGAGCAGCGGCGGCGGCGGCGGCGGCCCGGGAGAGACAGCAGC
AACAGGGGGGGATATTTCGCCGGGGCCTCCGCCCAGCGGCCCCGGCCGCG
GCGCCACTCTGATGGATCCCGCGCCTTCCTCGTTCGACGGCGTCGGCGGC
GACGACGGCGACGAGGACGGCGACGACGGAGGCGGCGTTGACGGCAGCTT
CGTCGAGGGGTTTGGGGGGCCCGGTGGCTGGGACGACCCTGGTTCCGGGA
AGAACGGTCGCTCGCACTCTGGGCGGGGAGGAGGTAAGGACGGGGAGTGG
GAGGGGGTCAGCAGTGCGCCCGAGGGAATGAGCACGGATTCGAGCAACAA
CAACGACGACGGCGGCAGCAGCGACAACCTCGGCACCGGCCGCAGAGGAA
GCGCGGGGGGCGTCACGCGGCGGAGGAGGAAGAGCCGGGAGGAGCGGAAG
GCGGCGGCGGCGGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGGAGGA
GGTCGAGGAGGAGGGGGAAGCAGAAACACCAGCAGCAGCAGGTTTCGAGT
GGGATCGAAGGCATTTTTCGGACGGGGCAGCGGGGGGCAGGGTGACGTTT
TCGATCGACGACCTGTCCCGCGGCCTGGAAAGCGTCAGCGTGCATGTGGG
TGAAGTTTGCTGGCGTTCTTGTTGTCGTTGTCGTCGGTGTTGCTGTTGGT
GGTGGTGGTGGTGGCGTTAGCGGTGAGGGGTGGGGAGGGGGCGTGCTTCG
GCGACAACATGAACCCAAATTACGTAGGCGTCAACATCAGAGATCAGTGC
TAACGAGAACTACTGCCATGTCGGCGATCGCTGGTGTCGGAGAGACGAGC
TGCCGCCCTTCGCAGTGAAAATAGTTCCGCCACCGCTGCCACGGTGTTGA
CAGTAGACACCCTGTACCACAGGCATTGTACCGTCGGTGGTGGCGGTGAT
TTTTTTTCTGCTTTTTTTCTGTGCGTGTATCTCAACTCAAACAAGCGTGC
CCCGTGCCATACGCGGTCGCATTCGCGGCACTTGGAAGGCGCTCCCAAGA
CTGCTGGGACTTGACGGTCTTCTGATCGGCTCATGCGCGTATTCCGCCGG
CCCAACGAACAAACGATTTTTTTTTTTCCCTGAACGAACGAAATCAGGTG
TGCAACGATGAGGACGAGGAGAAGCTCCCATACTTTCGCTACGTCACTGG
CTACGTCATGGGCGGGGACGTTCAGCAGAACATGGACGTGGATGCGATGG
TGAGGAAGGTGTGCGACGCTCGGTTGTCGTACGCCCTTGACGGCTTTCAT
CCCTGACAGGCCGAGCCGCCTCCAAGTCTCCTCCAACACCCCGCGGGGTA
TCTTCGAACCTAGCCAGCTTCAAAGTTGAGCTTCTTTTTCTGCCAGCGCC
GTTTGCTTGGTTACTTCGTTCTTCGGCTGTCACGCTCCATCCTCTGACAC
CGTCTTCCCTTTTGTGGGGTACCCTGCGTCTCTTGACGTAGCTCGAAATA
ACACAAAGCGTCTTGCCTAACGCCTCCTATCCCACGCGCCTCTTGTCCGC
CGAACAAGAAACCGTACACAATGAACCCTCACTGTTTGGAAGTCAACAGA
AACCTCGACGTTCGTCTCACACGACGTAACTCAGGAGGTGTTCCCCCGAC
GTGGTTGTGCCTTTCTTAAAAATAACGCCGTATGCCACATCTCCAATCTG
AGATTCGGCCCTACGGCAAAGGCAAGGATGAGGCCAAGGGTCCCTCTACC
TCATGTCCCCAGGTCTGGTGGCGCCCTCTGTCAAACGCGCGCGTGCCTAG
GCCGGCCCATACCTGAATGTAGCAGTAGTGCCGAAGAGTGTTTCATAATG
TTGACAGAACTTCAGCGTTTTACTTCCAAACTGAGATAGACTTGTATTTT
GCTCAGGGGATGACTATCATACTGTATGTACACTCATTGCCGTTCTGCGT
AACCCCCAAACTCATGGTTTACTCCATGAGCACAAATGACAAGAGAAACT
GACCGAAAATATTCGTACGCTCATCTGTCGTTGACGTACGAACCCGTGCA
ATGTAGAAATCTAGTCTTTTGCATCTCCTGTGGAGTATTGCGCCCGTTTG
TGGAGACAGAGCGAGAACCAGTCTTTGGGCAGCAGGTCGTCCAAGCGCGG
TAATGGCTGCCGGTTCGTTTTTGGCCCTCGGCACACTTACCTTCCCCCCT
CAAACCGAAAAAGACCTACTGAAGACCCGTCATCCGCCTTTTGGCTGCTC
GCTGGCAACTTTGACGAAAAACATAACAGCACCGTAGGAACACCCCCTGA
GGTACGTCGTGCGAGGCGTAGCTCGAGGCTTCTTCTGCTGAGCCCCAAAC
AGCAAAGGTTCATTGATGTGTAAGGTTGGGACAAAAGCATGAGCAGAAAA
AGGGGGAAAAACAAAGAAACACTCGCCGACTCGGGTACGTGCGAACGCGG
CCTGGGTGACGGCGCCCGAACACCGCATTTTCCCGGCTGCTGCGCACCCC
CGGAACGAGATCGTCAACCCTGCCAGCGTCACAACAACGCCACCTCTTCC
GAGGGCATTCCGTTCGAGGCTTCCCTACCCGGGCTGCCCCGAAAGACTTC
CTACCTCATTTTTTGGGGGGGCCCCTCCGGTCTCGGGACGCCACCGCTGT
TCCGTTCGCCGGAAGTCAGACACCCAAAGACAGCGCCGTGACCCCTTTCC
CAGGTCTGCTGCGACTGCACGGACGGGTGC
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs9704:1..4480-

>mRNA_H-canaliculatus_M_contigs9704.1.1 ID=mRNA_H-canaliculatus_M_contigs9704.1.1|Name=mRNA_H-canaliculatus_M_contigs9704.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=1059bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9704:1..4480- (Hapterophycus canaliculatus Oshoro7m male)
ATGGTGCACTGCAGCCTGAAGTTCAAGTGCTGGCTCTGCGACGACAAGCC
AATGGAGCGGCTCCGCAGGCGCATCCCGGGCTACGAGCACAACAGCCGGA
GCGTTCTCACGAGCCTCATCACCAACAACCTGAACATGGTGCGTTGGTCC
TCGTGTTGCGACAAAGACACCAAGGCCTTGTCGCACATCGGGCGAGGGAG
CGGCGGCGCCCGTCCCGCTGCCGGCACCGGCGGCGCCTCCAAACGAAGCA
GACCCAAGAAGTCGGCGAGACACGCCTCCTCGAGCTCGGCGGCGACGGAT
TCGGACCGCTCCGTGCCCCCGCCGTCCCGTCGACGGCAGCGGCAACAGCA
GCAACAGCAGCAACAGCAGCAACAGTACCGCCCTCGGTCGCCGACGCGTC
CGGGGGGCGGCGGCGGCAGCGGCGGCAGCGGCAGCTCCTGGCGGAGCGTC
TCCGCTTCCGAGAGCGAAGAGGCATGCGGGAGCGAGGCCGAGCGCGGGAA
GTCGAGGAGCAGCGGCGGCGGCGGCGGCGGCCCGGGAGAGACAGCAGCAA
CAGGGGGGGATATTTCGCCGGGGCCTCCGCCCAGCGGCCCCGGCCGCGGC
GCCACTCTGATGGATCCCGCGCCTTCCTCGTTCGACGGCAACGGTCGCTC
GCACTCTGGGCGGGGAGGAGGTAAGGACGGGGAGTGGGAGGGGGTCAGCA
GTGCGCCCGAGGGAATGAGCACGGATTCGAGCAACAACAACGACGACGGC
GGCAGCAGCGACAACCTCGGCACCGGCCGCAGAGGAAGCGCGGGGGGCGG
GGAAGCAGAAACACCAGCAGCAGCAGGTTTCGAGTGGGATCGAAGGCATT
TTTCGGACGGGGCAGCGGGGGGCAGGGTGACGTTTTCGATCGACGACCTG
TCCCGCGGCCTGGAAAGCGTCAGCGTGCATGTGTGCAACGATGAGGACGA
GGAGAAGCTCCCATACTTTCGCTACGTCACTGGCTACGTCATGGGCGGGG
ACGTTCAGCAGAACATGGACGTGGATGCGATGGTCTGCTGCGACTGCACG
GACGGGTGC
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