mRNA_H-canaliculatus_M_contigs9700.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs9700.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN79_9PHAE) HSP 1 Score: 271 bits (693), Expect = 2.680e-88 Identity = 128/156 (82.05%), Postives = 141/156 (90.38%), Query Frame = 1
Query: 1 RSKLTQNPDDARLQLEAAEALLKWMRHSTNGNFPTVSEEGRVSQGDSPSSRAIWRKYAPEALRLLKNGATHALDSDGSSGGFDIAKYRFLQAEASTYLSSAKGILRAALQADAVAFKRNVKPLIDDHPKYQGGVGHTFMGSFYLVAPWPVHNLGKA 468
RS+L +NPDD RL L+ AEALLKW+RH+TNGNFP VS EG+V GDSP+SRAIWRK+APEALRLLK GATHALDS GG+D+AKYRFLQAEASTYLSSAKG+LRAALQADAVAF+RNVKPLIDDHP YQGGVGHTF+GSFYLVAPWPVHNL KA
Sbjct: 99 RSELKRNPDDPRLHLDTAEALLKWIRHTTNGNFPRVSAEGKVCDGDSPASRAIWRKHAPEALRLLKTGATHALDSGSCDGGYDLAKYRFLQAEASTYLSSAKGVLRAALQADAVAFRRNVKPLIDDHPAYQGGVGHTFLGSFYLVAPWPVHNLAKA 254
BLAST of mRNA_H-canaliculatus_M_contigs9700.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAB6_9STRA) HSP 1 Score: 128 bits (321), Expect = 4.580e-33 Identity = 70/151 (46.36%), Postives = 94/151 (62.25%), Query Frame = 1
Query: 16 QNPDDARLQLEAAEALLKWMRHSTNGNFPTVSEEGRVSQGDSPSSRAIWRKYAPEALRLLKNGATHALDSDGSSGGFDIAKYRFLQAEASTYLSSAKGILRAALQADAVAFKRNVKPLIDDHPKYQGGVGHTFMGSFYLVAPWPVHNLGKA 468
Q DA L+L AEALL ++R T+GN + +G+ S DSP +R +WR +APEAL LL+ + G + + FL AEA Y S + G+++AAL+ DA FK N KPL++ HP + GVGHTFMG+FYL APWPVH+ KA
Sbjct: 95 QRRSDAALKLRTAEALLAYIRGKTDGN--ALRADGKHS--DSPENRRLWRTHAPEALSLLE-------EVKAEKGQEPL--HAFLYAEAFMYCSCSTGVVKAALKGDAFHFKSNAKPLLEQHPSFGNGVGHTFMGAFYLGAPWPVHSASKA 232
BLAST of mRNA_H-canaliculatus_M_contigs9700.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BBW8_CHRCT) HSP 1 Score: 89.0 bits (219), Expect = 4.210e-18 Identity = 52/140 (37.14%), Postives = 76/140 (54.29%), Query Frame = 1
Query: 37 LQLEAAEALLKWMRHSTNGNFPTVSEEGRVSQGDSPSSRAIWRKYAPEALRLLKNGATHALDSDGSSGGFDIAKYRFLQAEASTYLSSAKGILRAALQADAVAFKRNVKPLIDDHPKYQGGVGHTFMGSFYLVAPWPVHN 456
L LEAA +L MR TN N ++ D+P + +WR+Y P AL L A A D + + Y A+A + +S +G+L+AA+ + FK N K LI P + GG+GH ++G+FYL+APWP+HN
Sbjct: 136 LCLEAAISLNTLMRIRTNSNTLHITR-----MLDTPEHKKVWREYGPRALELATI-AKRARPRDPEA----LCAY----ADAFFFSTSTRGVLKAAVSGSGLQFKANAKELIAKCPTHDGGIGHCYLGAFYLMAPWPLHN 261
BLAST of mRNA_H-canaliculatus_M_contigs9700.1.1 vs.
Match: 3-hydroxyisobutyryl-hydrolase (n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0LQZ8_9EUKA) HSP 1 Score: 85.5 bits (210), Expect = 1.740e-16 Identity = 55/147 (37.41%), Postives = 79/147 (53.74%), Query Frame = 1
Query: 28 DARLQLEAAEALLKWMRHSTNGNFPTVSEEGRVSQGDSPSSRAIWRKYAPEALRLLKNGATHALDSDGSSGGFDIAKYRFLQAEASTYLSSAKGILRAALQADAVAFKRNVKPLIDDHPKYQGGVGHTFMGSFYLVAPWPVHNLGKA 468
D RL L A+AL MR TN N ++ R+ D+P ++A+WR P AL L A A D + + Y A+A + +S KG+L AA+ + FK N K LI P+ GGVGH ++G+F+L+APWP+ N +A
Sbjct: 311 DGRLSLACAKALNAIMRIRTNSNTLHIT---RLL--DTPENKAVWRSLGPRALELATR-AKKARPQDPEA----LVAY----ADAYFFANSVKGVLAAAVTGSGLEFKGNSKELIRRCPRADGGVGHCYLGAFFLMAPWPLCNPKRA 443
BLAST of mRNA_H-canaliculatus_M_contigs9700.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q857_9EUKA) HSP 1 Score: 81.3 bits (199), Expect = 1.960e-15 Identity = 49/147 (33.33%), Postives = 79/147 (53.74%), Query Frame = 1
Query: 31 ARLQLEAAEALLKWMRHSTNGNFPTVSEEGRVSQGDSPSSRAIWRKYAPEALRLLKNG-ATHALDSDGSSGGFDIAKYRFLQAEASTYLSSAKGILRAALQADAVAFKRNVKPLIDDHPKYQGGVGHTFMGSFYLVAPWPVHNLGKA 468
A L+L+AA+AL MR +GN V +G + D+P ++ W ++ P AL L + A +L D + ++ +A Y ++KG+++ AL F+R + L+ H KY GGVGH F+G F+ VAPWP+ + +A
Sbjct: 99 ALLKLKAADALNCAMRVFGDGNIFLV--DGTL---DTPQNKQFWGRHGPRALALARAARADPSLQRDALAAHTEM--------DAFMYSGASKGMIKQALTGVGTDFRRIAEGLVSQHEKYDGGVGHAFLGGFFFVAPWPLGDKKRA 232
BLAST of mRNA_H-canaliculatus_M_contigs9700.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A2E6VSG3_9DELT) HSP 1 Score: 77.4 bits (189), Expect = 4.430e-14 Identity = 53/156 (33.97%), Postives = 78/156 (50.00%), Query Frame = 1
Query: 1 RSKLTQNPDDARLQLEAAEALLKWMRHSTNGNFPTVSEEGRVSQGDSPSSRAIWRKYAPEALRLLKNGATHALDSDGSSGGFDIAKYRFLQAEASTYLSSAKGILRAALQADAVAFKRNVKPLIDDHPKYQGGVGHTFMGSFYLVAPWPVHNLGKA 468
R L P++ +L +AL MR T+GN P + EG D+ + IW + PE L L + A +D + +A Y +A Y SSA GI+ A ++ A + N + + PKY G+GH FMG+FYL+APWP+ + KA
Sbjct: 75 RDALAGAPNELDAKLNLVDALNCVMRIRTHGNIPLI--EGT---NDTEPHKKIWGQMGPETLALAEE-VYKARPNDIRA----LAAYT----DAYMYRSSAWGIVNAVVKGAADQYVENAEKMTKKFPKYDSGLGHAFMGAFYLLAPWPLSDEEKA 216
BLAST of mRNA_H-canaliculatus_M_contigs9700.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AFS2_9EUKA) HSP 1 Score: 67.8 bits (164), Expect = 2.010e-11 Identity = 28/56 (50.00%), Postives = 38/56 (67.86%), Query Frame = 1
Query: 289 YLSSAKGILRAALQADAVAFKRNVKPLIDDHPKYQGGVGHTFMGSFYLVAPWPVHN 456
+ +S KG+L AA + FK N K LI +PK GGVGH ++G+FYL+APWP+ N
Sbjct: 21 FANSVKGVLTAATTGSGLKFKANAKELIARYPKLDGGVGHCYLGAFYLMAPWPIKN 76 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs9700.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs9700.1.1 >prot_H-canaliculatus_M_contigs9700.1.1 ID=prot_H-canaliculatus_M_contigs9700.1.1|Name=mRNA_H-canaliculatus_M_contigs9700.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=156bp RSKLTQNPDDARLQLEAAEALLKWMRHSTNGNFPTVSEEGRVSQGDSPSSback to top mRNA from alignment at H-canaliculatus_M_contigs9700:2957..4139+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs9700.1.1 ID=mRNA_H-canaliculatus_M_contigs9700.1.1|Name=mRNA_H-canaliculatus_M_contigs9700.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=1183bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9700:2957..4139+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs9700:2957..4139+ >mRNA_H-canaliculatus_M_contigs9700.1.1 ID=mRNA_H-canaliculatus_M_contigs9700.1.1|Name=mRNA_H-canaliculatus_M_contigs9700.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=468bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9700:2957..4139+ (Hapterophycus canaliculatus Oshoro7m male)back to top |