mRNA_H-canaliculatus_M_contigs958.2.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs958.2.1 vs.
Match: DNA (replication complex GINS protein SLD5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTQ1_ECTSI) HSP 1 Score: 291 bits (745), Expect = 6.690e-98 Identity = 152/169 (89.94%), Postives = 160/169 (94.67%), Query Frame = 1
Query: 13 PSFRWGGGSRSAWRNEVSAPELLTLDEHLVSDLIQQVENQQEIVDDARASPEDAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLASADGEMDGRLSDREREHAKSYVDMLEDHFTRTCLSQMPSNFRSLTNTSKEENMVQEPNLDTFVVCRAKEDVGLVQIGE 519
P F +G SR+ WRNEVSAPELL +DEHLVSDLIQQVENQQEIVDDARASPE+AFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLA+ DGEM GRLSDREREHAK YVDMLEDHFTRTCLSQMPSNFRSLTNTS+EENMVQEPNLDTFVVCRA++DVGLVQIGE
Sbjct: 33 PFFAFGL-SRTLWRNEVSAPELLKVDEHLVSDLIQQVENQQEIVDDARASPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATVDGEMQGRLSDREREHAKGYVDMLEDHFTRTCLSQMPSNFRSLTNTSQEENMVQEPNLDTFVVCRARDDVGLVQIGE 200
BLAST of mRNA_H-canaliculatus_M_contigs958.2.1 vs.
Match: DNA (replication complex GINS protein SLD5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSS9_9PHAE) HSP 1 Score: 288 bits (738), Expect = 7.770e-97 Identity = 148/160 (92.50%), Postives = 155/160 (96.88%), Query Frame = 1
Query: 40 RSAWRNEVSAPELLTLDEHLVSDLIQQVENQQEIVDDARASPEDAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLASADGEMDGRLSDREREHAKSYVDMLEDHFTRTCLSQMPSNFRSLTNTSKEENMVQEPNLDTFVVCRAKEDVGLVQIGE 519
R+ WRNEV APELL +DEHLVSDLIQQVENQQEIVDDARASPE+AFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLA+ADGEM GRLSDREREHAK YVDMLEDHFTRTCLSQMPSNFRSLTNTS+EENMVQEPNLDTFVVCRA++DVGLVQIGE
Sbjct: 41 RTLWRNEVCAPELLKVDEHLVSDLIQQVENQQEIVDDARASPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATADGEMQGRLSDREREHAKGYVDMLEDHFTRTCLSQMPSNFRSLTNTSQEENMVQEPNLDTFVVCRARDDVGLVQIGE 200
BLAST of mRNA_H-canaliculatus_M_contigs958.2.1 vs.
Match: DNA (replication complex GINS protein SLD5 n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CA29_9STRA) HSP 1 Score: 135 bits (341), Expect = 2.480e-36 Identity = 72/160 (45.00%), Postives = 107/160 (66.88%), Query Frame = 1
Query: 40 RSAWRNEVSAPELLTLDEHLVSDLIQQVENQQEIVDDARASPEDAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLASADGEMDGRLSDREREHAKSYVDMLEDHFTRTCLSQMPSNFRSLTNTSKEENMVQEPNLDTFVVCRAKEDVGLVQIGE 519
+ A+ NE ++PELL + LV DL+ Q E++ DARA+ +AF+ASLYQME+DR+++ +S YLRTRL K++R A+H+L ++ EM R+S E YVD LE HF ++ + +P+ +R LT++SK +MV+ PN DT V CR EDVG Q+ +
Sbjct: 76 KRAFLNEKTSPELLPYEADLVQDLVDATTQQSEVIADARATTAEAFAASLYQMEIDRVKFLVSSYLRTRLFKIQRYAVHLLRTS--EMHARMSPEEERFTVGYVDALEQHFHKSFMDAVPAKYRGLTDSSKRTDMVRRPNADTHVFCRVVEDVGDHQLDD 233
BLAST of mRNA_H-canaliculatus_M_contigs958.2.1 vs.
Match: DNA (replication complex GINS protein SLD5 n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MJ49_9STRA) HSP 1 Score: 129 bits (323), Expect = 3.790e-34 Identity = 73/165 (44.24%), Postives = 106/165 (64.24%), Query Frame = 1
Query: 40 RSAWRNEVSAPELLTLDEHLVSDLIQQVENQQEIVDD-----ARASPEDAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLASADGEMDGRLSDREREHAKSYVDMLEDHFTRTCLSQMPSNFRSLTNTSKEENMVQEPNLDTFVVCRAKEDVGLVQIGE 519
R W NE++APE+L +E +V+++++Q+ NQQE VD A+ + E +F LYQME+DRLRY++S YLRTRLRK+E+ A+ +L+ D + RLS +ER A+ +V + E H L++ +RSLT +E MV EPNLD+FV C KE VQ+ E
Sbjct: 30 RILWVNELNAPEILRYNEEMVAEMLEQIRNQQEYVDSVYEDRAQLTEEKSFVNKLYQMEIDRLRYTVSSYLRTRLRKIEKFAIQILS--DPTLTQRLSLKERNFAQQFVMLFESHVNELALNKFNQEYRSLT----DEGMVSEPNLDSFVFCEGKEGAEAVQVDE 188
BLAST of mRNA_H-canaliculatus_M_contigs958.2.1 vs.
Match: DNA (replication complex GINS protein SLD5 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CKA4_SAPPC) HSP 1 Score: 128 bits (321), Expect = 5.800e-34 Identity = 76/162 (46.91%), Postives = 104/162 (64.20%), Query Frame = 1
Query: 40 RSAWRNEVSAPELLTLDEHLVSDLIQQVENQQEIV-----DDARASPEDAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLASADGEMDGRLSDREREHAKSYVDMLEDHFTRTCLSQMPSNFRSLTNTSKEENMVQEPNLDTFVVCRAKEDVGLVQ 510
R AW NE++APE+L L+SD+++QV+NQQE V D A + E AFS LYQME+DR++Y ++ YLR RL K+E+ HVLAS+ MD RLS E E+A Y++ML+ HF L++ P R L + M+ P+LDTFV C +KED+G VQ
Sbjct: 22 REAWVNELNAPEILDFKVELLSDMVEQVQNQQEYVEEIARDQANMTEERAFSNKLYQMEIDRIKYMIASYLRIRLSKIEQHTRHVLASS---MD-RLSSAEIEYATKYLEMLDGHFHDLVLAKFPVEQRKLD----ADEMIDAPDLDTFVFCESKEDLGQVQ 175
BLAST of mRNA_H-canaliculatus_M_contigs958.2.1 vs.
Match: DNA (replication complex GINS protein SLD5 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C5M9_9STRA) HSP 1 Score: 127 bits (320), Expect = 7.160e-34 Identity = 68/161 (42.24%), Postives = 104/161 (64.60%), Query Frame = 1
Query: 31 GGSRSAWRNEVSAPELLTLDEHLVSDLIQQVENQQEIVDDARASPEDAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLASADGEMDGRLSDREREHAKSYVDMLEDHFTRTCLSQMPSNFRSLTNTSKEENMVQEPNLDTFVVCRAKEDVGLVQI 513
G R+AW E + P++ DE L +D+ +Q++NQQ +D ++AF+ASLYQME+DR+++SL++YLRTRL KVE LH+LAS E +LS E ++A+ Y ++++HFT L ++P FR + ++ PN DT+V CR KED+G VQ+
Sbjct: 14 GKLRNAWVAESTCPDIRPFDEDLFADVSEQIQNQQAFIDKTVTETDEAFTASLYQMEIDRVKFSLARYLRTRLLKVESQVLHILASP--EQKAKLSPAELDYAEKYERLVKEHFTHCVLDELPEPFRKFGEADDAGDALR-PNQDTYVFCRIKEDLGEVQL 171
BLAST of mRNA_H-canaliculatus_M_contigs958.2.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTT8_PYTOL) HSP 1 Score: 127 bits (318), Expect = 1.820e-33 Identity = 72/162 (44.44%), Postives = 105/162 (64.81%), Query Frame = 1
Query: 40 RSAWRNEVSAPELLTLDEHLVSDLIQQVENQQEIVDD-----ARASPEDAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLASADGEMDGRLSDREREHAKSYVDMLEDHFTRTCLSQMPSNFRSLTNTSKEENMVQEPNLDTFVVCRAKEDVGLVQ 510
++ W NE++APE+L D+ +V++++ Q++NQQE VD A + E AF LYQME+DRL+Y +S YLRTRLRK E+ A H+L D + RLS +E + AK YV + ++H + L++ P RSLT E MV EP+LD+FV C +KE +G +Q
Sbjct: 24 QTLWLNEINAPEILPYDDEMVAEMLDQIKNQQEYVDSVSEDKAALTEERAFINKLYQMEIDRLKYMVSSYLRTRLRKTEKFAQHILN--DPVLTQRLSQKEIQFAKQYVMLFDNHVSELALARFPDEHRSLT----AEGMVVEPDLDSFVFCESKESLGQLQ 179
BLAST of mRNA_H-canaliculatus_M_contigs958.2.1 vs.
Match: DNA (replication complex GINS protein SLD5 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GLW1_9STRA) HSP 1 Score: 126 bits (317), Expect = 2.080e-33 Identity = 74/166 (44.58%), Postives = 106/166 (63.86%), Query Frame = 1
Query: 40 RSAWRNEVSAPELLTLDEHLVSDLIQQVENQQEIVDDARA-----SPEDAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVL-ASADGEMDGRLSDREREHAKSYVDMLEDHFTRTCLSQMPSNFRSLTNTSKEENMVQEPNLDTFVVCRAKEDVGLVQIGE 519
R AW NE++APELLT L+SD+++QV+NQQ VD+ A + E +F+ LYQME+DR++Y L+ YLR RL K+ER HVL AS D +LS E ++A SY D+ E H LS++P + + L E +M+ P+LDTFV C++ +D+G VQI +
Sbjct: 18 RDAWANELNAPELLTFQTDLISDMVEQVQNQQSYVDEMSADVATLTEERSFTNKLYQMEIDRIKYMLASYLRLRLMKIERHTRHVLHASMD-----KLSPGEVDYAHSYKDLYESHCRDLLLSKLPPDHQQLD----EPHMIDHPDLDTFVFCQSNQDIGNVQIDD 174
BLAST of mRNA_H-canaliculatus_M_contigs958.2.1 vs.
Match: DNA (replication complex GINS protein SLD5 n=2 Tax=Phytophthora TaxID=4783 RepID=A0A8J5IXW6_9STRA) HSP 1 Score: 125 bits (313), Expect = 9.470e-33 Identity = 72/160 (45.00%), Postives = 102/160 (63.75%), Query Frame = 1
Query: 40 RSAWRNEVSAPELLTLDEHLVSDLIQQVENQQEIVDD-----ARASPEDAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLASADGEMDGRLSDREREHAKSYVDMLEDHFTRTCLSQMPSNFRSLTNTSKEENMVQEPNLDTFVVCRAKEDVGL 504
R+ W NE++APE+L DE +VS++++Q+ NQQE VD A+ + E +F LYQME+DRLRY +S YLRTRL K+E+ A+H+L+ D + RLS +ER A+ +V + E H L + R+LT E MV EPNLD+FV C+ KE G+
Sbjct: 22 RTLWVNELNAPEILQYDEEMVSEMLEQIRNQQEYVDSVYEDRAQLTEEKSFVNKLYQMEIDRLRYMVSSYLRTRLHKIEKFAIHILS--DAVLTQRLSVKERNFAQQFVMLFESHVNDLALGKFTKENRTLT----AEGMVPEPNLDSFVFCQGKEAGGV 175
BLAST of mRNA_H-canaliculatus_M_contigs958.2.1 vs.
Match: DNA (replication complex GINS protein SLD5 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7K8_GLOUD) HSP 1 Score: 125 bits (313), Expect = 1.050e-32 Identity = 73/162 (45.06%), Postives = 101/162 (62.35%), Query Frame = 1
Query: 40 RSAWRNEVSAPELLTLDEHLVSDLIQQVENQQEIVDDARA-----SPEDAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLASADGEMDGRLSDREREHAKSYVDMLEDHFTRTCLSQMPSNFRSLTNTSKEENMVQEPNLDTFVVCRAKEDVGLVQ 510
R+ W NE++APE+L DE +VS+++ Q+ NQQE VD + E AF LYQME+DRL+Y +S YLRTRLRK+E+ ALH+L+ D + RLS +E AK YV + E H L + RS+T+ E M+ EP+LDTFV C +K +G +Q
Sbjct: 25 RALWINEMNAPEILPYDEEIVSEMLDQIRNQQEYVDSVSEDKDSLTEERAFVNKLYQMEIDRLQYMVSSYLRTRLRKIEKFALHLLS--DAVLSQRLSQKELNFAKQYVVLFETHVNDLALGKFAEEHRSITS----EGMIVEPDLDTFVFCESKTVLGQLQ 180 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs958.2.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs958.2.1 >prot_H-canaliculatus_M_contigs958.2.1 ID=prot_H-canaliculatus_M_contigs958.2.1|Name=mRNA_H-canaliculatus_M_contigs958.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=173bp MSPLPSFRWGGGSRSAWRNEVSAPELLTLDEHLVSDLIQQVENQQEIVDDback to top mRNA from alignment at H-canaliculatus_M_contigs958:7687..10891+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs958.2.1 ID=mRNA_H-canaliculatus_M_contigs958.2.1|Name=mRNA_H-canaliculatus_M_contigs958.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=3205bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs958:7687..10891+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs958:7687..10891+ >mRNA_H-canaliculatus_M_contigs958.2.1 ID=mRNA_H-canaliculatus_M_contigs958.2.1|Name=mRNA_H-canaliculatus_M_contigs958.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=519bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs958:7687..10891+ (Hapterophycus canaliculatus Oshoro7m male)back to top |