mRNA_H-canaliculatus_M_contigs9272.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs9272.1.1
Unique NamemRNA_H-canaliculatus_M_contigs9272.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs9272.1.1 vs.
Match: Amine (oxidase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF22_ECTSI)

HSP 1 Score: 446 bits (1147), Expect = 1.690e-153
Identity = 216/299 (72.24%), Postives = 240/299 (80.27%), Query Frame = 1
Query:    1 QGSLGQVVDELSDGLERCIRTDWPVAKVDCTTEGLVTVTCRDGRLERGTHVVSALPLSVLQDGDVEFSPALPEAKVTAFQRMGMCSVVKVILKFDRPVLPPLLHGCICSESFIPEFWFRHMPNVPEGGYTMLAVGFTAGPPSEAASALTHEEALKRALDQLDDMFGDREWLTGGRCTGKGDWEASTGTATSKEGRQHEAAEQKGVGAEACEEKAVELPSTGYVGGLVHDWVKDEPFVRGGYCYPRVGFDENTHADAAASVGGRLFFAGEHTNTPTGMTVHAAIDSGERWVLGVLPVVYK 897
            QGSLGQVVDELS GLE CI+TDWPV+KV+ T  GL TVTCRDGR+E+GTHVVSALPLSVLQDGDVEF P LPEAK+ AFQ MG+CS+VKVILKFDR VLPPLLHGCICSESFIPEFWFRH+PN+PEGGYTMLAVGF AGP ++A +++  +EALK+ALDQLDDMF  R+WL GG CTGKGDWE +    T       E   +  V     E    ELPS+ YVGGLVHDWVKDEPFVRGGYCYPR+GFDE THA  AASV G LFFAGEHTNTPTG TVHAAIDSG+R   GVL  V +
Sbjct:  150 QGSLGQVVDELSAGLESCIQTDWPVSKVEFTASGLATVTCRDGRIEQGTHVVSALPLSVLQDGDVEFVPPLPEAKLAAFQHMGLCSIVKVILKFDRRVLPPLLHGCICSESFIPEFWFRHLPNLPEGGYTMLAVGFAAGPRADAVTSVKPKEALKKALDQLDDMFRGRKWLEGGGCTGKGDWEETVEVHTGIAPEHCEPRRETSVSGGQGEGTLAELPSSAYVGGLVHDWVKDEPFVRGGYCYPRIGFDETTHAHLAASVNGTLFFAGEHTNTPTGTTVHAAIDSGDRAASGVLQAVQR 448          
BLAST of mRNA_H-canaliculatus_M_contigs9272.1.1 vs.
Match: PAO (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVR3_9PHAE)

HSP 1 Score: 408 bits (1048), Expect = 2.020e-137
Identity = 198/274 (72.26%), Postives = 223/274 (81.39%), Query Frame = 1
Query:   55 IRTDWPVAKVDCTTEGLVTVTCRDGRLERGTHVVSALPLSVLQDGDVEFSPALPEAKVTAFQRMGMCSVVKVILKFDRPVLPPLLHGCICSESFIPEFWFRHMPNVPEGGYTMLAVGFTAGPPSEAASALTHEEALKRALDQLDDMFGDREWLTGGRCTGKGDWE----ASTGTATSKEGRQHEAAEQKGVGAEACEEKAVELPSTGYVGGLVHDWVKDEPFVRGGYCYPRVGFDENTHADAAASVGGRLFFAGEHTNTPTGMTVHAAIDSGER 864
            ++TDWPV+KV+ T  GL TVTCRDGR+E+GTHVVSALPLSVLQDGDVEF P LPEAK++AFQ MG+CS+VKVILKFDR VLP LLHGCICSESFIPEFWFRH+PN+PEGGYTMLAVGF AGP ++A +++  EEALK+ALDQLDDMF  R+WL GG CTGKGDWE     +TG A        E +   G G    E    ELPS+ YVGGLVHDWVKDEPFVRGGYCYPR+GFDE THA  AAS+ G LFFAGEHTNTPTGMTVHAAIDSG+R
Sbjct:  269 LQTDWPVSKVEFTASGLATVTCRDGRIEQGTHVVSALPLSVLQDGDVEFVPPLPEAKLSAFQHMGLCSIVKVILKFDRRVLPQLLHGCICSESFIPEFWFRHLPNLPEGGYTMLAVGFAAGPRADAVTSVKPEEALKKALDQLDDMFRGRKWLEGGGCTGKGDWEEAVEGNTGIAPEHCEPHRETSGSGGQG----EGTLAELPSSAYVGGLVHDWVKDEPFVRGGYCYPRIGFDETTHAHLAASINGTLFFAGEHTNTPTGMTVHAAIDSGDR 538          
BLAST of mRNA_H-canaliculatus_M_contigs9272.1.1 vs.
Match: Amino_oxidase (domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIW8_9STRA)

HSP 1 Score: 173 bits (439), Expect = 5.110e-47
Identity = 107/301 (35.55%), Postives = 144/301 (47.84%), Query Frame = 1
Query:   10 LGQVVDELSDGLERCIRTDWPVAKVDCT--TEGLVTVTCRDGRLERGTHVVSALPLSVLQDGDVEFSPALPEAKVTAFQRMGMCSVVKVILKFDRPVLPPLLHGCICSESFIPEFWFRHMPNVPEGGYT----MLAVGFTAGPPSEAA-SALTHEEALKRALDQLDDMFGDREWLTGGRCTGKGDWEASTGTATSKEGRQHEAAEQKGVGAEACEEKAVELPSTGYVGGLVHDWVKDEPFVRGGYCYPRVGFDENTHADAAASVGGRLFFAGEHTNTPTGMTVHAAIDSGERWVLGVLPVV 891
            L  +V  ++ G    +  +WP A+V+C     G V VTCRDGR   GTH V A+PLSV+QDG +EFSP LP AK+ A Q  GM   VKV+LKF +      LHG IC++   PEFWFR +P       T     + V F +G  ++A   + + E+   + L+QLD +FG                                                    S  ++G  + DW  + PF+RGGY YP+ G       + AA  G  LFFAGEHTN   GMT+HAA D+G R  L V+  +
Sbjct:  205 LRAIVQHVAAGAN--VVCNWPAARVECCEGAGGRVVVTCRDGRRVAGTHAVIAVPLSVMQDGGIEFSPQLPPAKLAALQCFGMGRAVKVLLKFSQLWFDQDLHGLICADMKFPEFWFRPVPECDSHECTDKTKAVVVAFASGAFADAVMDSASDEQVFTQVLEQLDVIFGPIS-------------------------------------------DHPNPASDCFLGAKIVDWKTEYPFIRGGYSYPKQGHKAGAGGEIAAPEGDHLFFAGEHTNAAAGMTLHAAYDTGTRAALEVVQAI 460          
BLAST of mRNA_H-canaliculatus_M_contigs9272.1.1 vs.
Match: Amine (oxidase-like protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U817_VOLCA)

HSP 1 Score: 137 bits (346), Expect = 2.370e-33
Identity = 97/295 (32.88%), Postives = 136/295 (46.10%), Query Frame = 1
Query:    7 SLGQVVDELSDGLERCIRTDWPVAKV----DCTTEGLVTVTCRDGRLERGTHVVSALPLSVLQDGDVEFSPALPEAKVTAFQRMGMCSVVKVILKFDRPVLPPLLHGCICSESFIPEFWFRHMPNV-PEGGYTMLAVGFTAGPPSEAASALTHEEALKRALDQLDDMFGDR-EWLTGGRCTGKG---DWEASTGTATSKEGRQHEAAEQKGVGAEACEEKAVELPSTGYVGGLVHDWVKDEPFVRGGYCYPRVGFDENTHADAAASVGGRLFFAGEHTNTPTGMTVHAAIDSGER 864
            S+G V+  L+      +RT W V+ +    +   +G V +   DGR+ R    +  +P+++LQ G + FSP LP AK  A  R+ M +VVKV+L F R      ++  +C  +F PEFW  + P   P  G     VGF AG  ++  SAL  E A KR L+QLD++FG   +      C  KG   DW     T T            + +       +A   P               EPFVRG Y YP +G +    A  A+ V GRLFFAGE TN      +  A+ + ER
Sbjct:  243 SMGSVITHLARDAN--VRTSWVVSSISYGGEAGAKGGVRICAADGRVVRCQAALLTVPVTILQQGAITFSPPLPAAKTAALSRVRMGNVVKVVLSFSRRFWREDMYDVVCPGAFAPEFWMLNYPVTNPGAGTPHCVVGFIAGERADEVSALGPEAAQKRFLEQLDEIFGTAADPHPASSCVVKGHVVDWSKHLRTCT------------RCIIPHYYPPRAFSPP---------------EPFVRGAYSYPSLGAELGDRAALASPVAGRLFFAGEATNEAINPCIQGAMQTAER 508          
BLAST of mRNA_H-canaliculatus_M_contigs9272.1.1 vs.
Match: Amine (oxidase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YLF2_COCSC)

HSP 1 Score: 129 bits (323), Expect = 2.900e-30
Identity = 94/301 (31.23%), Postives = 138/301 (45.85%), Query Frame = 1
Query:   10 LGQVVDELSDGLERCIRTDWPVAKVDCTTEGLVTVTCRDGRLERGTHVVSALPLSVLQDGDVEFSPALPEAKVTAFQRMGMCSVVKVILKFDRPVLPPLLHGCICSESFIPEFWFRHMPNV---PEGGYTMLAVGFTAGPPSEAASALTHEEALKRALDQLDDMFGDREWLTGGRCTGKGDWEASTGTATSKEGRQHEA-------AEQKGVGAEACEEKAVELPSTGYVGGLVHDWVKDEPFVRGGYCYPRVGFDENTHADAAASVGGRLFFAGEHTNTPTGMTVHAAIDSGERWVLGVL 882
            L  +V  LS G+E  I+  WPV++++   EG   +    G + +   V+  +P+ +LQ   + FSP LP  K  A  R+ M + VKVI  F  P  P      +C++SF+PEFW    P     P        VGF AG  +E  S L+    + R+L QLD +FG R   + G     G          S+ G            A+Q  + A + +  A    +  +V   V DW +  P++ G Y YP +G         AAS+G  LFFAGE T+      + AA+++GER    VL
Sbjct:  203 LQALVQHLSKGVENNIQLQWPVSRIEYGPEG-AKLYGPSGSVVQCRRVIVTVPIMMLQQERIIFSPPLPAEKTAAISRIKMSNAVKVIFAFSWPFWPTGFFDVVCTDSFMPEFWVTEYPATSSDPATAGLCCMVGFVAGARAEEISHLSQTAVITRSLAQLDHIFGKRSQNSPGNPRNMG----LLVLMASRRGDFGNVSLIFRFIAKQGPIQASSRKHPA----TAAFVRAHVEDWSRS-PYIGGAYSYPSLGARPGDRESLAASLGDTLFFAGEATHPAVNPCMQAALETGERAAAQVL 493          
BLAST of mRNA_H-canaliculatus_M_contigs9272.1.1 vs.
Match: Amine (oxidase-like protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AT21_PLAHL)

HSP 1 Score: 120 bits (300), Expect = 1.820e-27
Identity = 89/306 (29.08%), Postives = 134/306 (43.79%), Query Frame = 1
Query:    7 SLGQVVDELSDGLERCIRTDWPVAKVDCTTEGLVTVTCRDGRLERGTHVVSALPLSVLQDGDVEFSPALPEAKVTAFQRMGMCSVVKVILKFDRPVLPPLLHGCICSESFIPEFWF---------------RHMPNVPE----GGYTMLAVGFTAGPPSEAASALTHEEALKRALDQLDDMFGDREWLTGGRCTGKGDWEASTGTATSKEGRQHEAAEQKGVGAEACEEKAVELPSTGYVGGLVHDWVKDEPFVRGGYCYPRVGFDENTHADAAASVGGRLFFAGEHTN-TPTGMTVHAAIDSGER 864
            SL + +D  ++G+    R +WPVA VD +    + +T   G+      +V  + ++V     + +SP LP+ K+ A +   M    KVIL       P   HG ICS+ F+PEFWF               +++ NV +     G   L  GF +   +E    + H+E ++  LDQLD ++G  +     R                                              +V G+  DW  DEP++ GGY YPRVG  ++  ++ AA V  RLFFAGE T     GM+VHAA+D+G R
Sbjct:  150 SLMRFIDYFAEGV--MTRFNWPVANVDYSQSDRILLTSTSGKQLLCKALVVTVSIAVFSK--IAYSPPLPQQKLNAVKSFDMRRAGKVILHMSGQFWPENAHGVICSDCFLPEFWFNSTQGIGHLKTNGDKQYVANVTDKSADSGAKYLITGFASALYAEKFIGMDHDEIVEGFLDQLDMIYGTVDEPFPARKN--------------------------------------------FVKGIYKDW-GDEPWICGGYAYPRVGQSDSASSELAAPVDNRLFFAGEATAFEQPGMSVHAAVDTGTR 406          
BLAST of mRNA_H-canaliculatus_M_contigs9272.1.1 vs.
Match: Amino_oxidase (domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GBS5_PHYRM)

HSP 1 Score: 118 bits (296), Expect = 1.320e-26
Identity = 90/290 (31.03%), Postives = 121/290 (41.72%), Query Frame = 1
Query:   58 RTDWPVAKVDCTTEGLVTVTCRDGRLERGTHVVSALPLSVLQDGDVEFSPALPEAKVTAFQRMGMCSVVKVILKFDRPVLPPLLHGCICSESFIPEFWFRHMPNV------------------PEGGYTM-LAVGFTAGPPSEAASALTHEEALKRALDQLDDMFGDREWLTGGRCTGKGDWEASTGTATSKEGRQHEAAEQKGVGAEACEEKAVELPSTGY-VGGLVHDWVKDEPFVRGGYCYPRVGFDENTHADAAASVGGRLFFAGEHTN-TPTGMTVHAAIDSGER 864
            R +WPVA VD +    + VT   G+      +V  +  +V     + ++PALP+ KV A     M    KV+L       P   HG +CSE F+PEFWF +   +                   EGG    L  GF     +E    + HEE ++  LDQLD ++G                                            +E A   P+  Y V G+  DW  D  ++RGGY +PRVG  +    D A  V GR+FFAGE T     GMTVHAAID+G R
Sbjct:  227 RLNWPVASVDYSQSDRILVTSTSGKQLLCRTLVVTVATAVFSK--IAYTPALPQEKVDAVASFDMRRAGKVLLHMSGRFWPEDAHGVVCSECFLPEFWFNNTKGIGYLKSNGDMLCAEKEACDSEGGNVQYLITGFAGALYAERFVGVAHEEIIEGFLDQLDTIYG------------------------------------------TVDEPA---PARKYFVKGMYEDW-GDNEWIRGGYAFPRVGQSDTASRDLAEPVDGRIFFAGEATAFEQPGMTVHAAIDTGTR 468          
BLAST of mRNA_H-canaliculatus_M_contigs9272.1.1 vs.
Match: Amino_oxidase (domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZPG5_PHYSP)

HSP 1 Score: 116 bits (291), Expect = 1.570e-26
Identity = 85/291 (29.21%), Postives = 122/291 (41.92%), Query Frame = 1
Query:   58 RTDWPVAKVDCTTEGLVTVTCRDGRLERGTHVVSALPLSVLQDGDVEFSPALPEAKVTAFQRMGMCSVVKVILKFDRPVLPPLLHGCICSESFIPEFWFRHMPNV----PEGGYTMLA-----------------VGFTAGPPSEAASALTHEEALKRALDQLDDMFGDREWLTGGRCTGKGDWEASTGTATSKEGRQHEAAEQKGVGAEACEEKAVELPSTGYVGGLVHDWVKDEPFVRGGYCYPRVGFDENTHADAAASVGGRLFFAGEHTN-TPTGMTVHAAIDSGER 864
            R +WPVA VD +    + VT   G+      +V  +  +V     + ++P LP+ K+ A     M    KV+L       P   HG ICSE F+PEFWF     +    P G  T++A                  GF     +E+   + H++ ++  LDQLD ++G  +                      K   +H                        +V G+  DW  DEP++ GGY +PRVG  +    D AA V  R+FFAGE T     GM+VHAAID+G R
Sbjct:  109 RLNWPVASVDYSQSYRILVTSTSGKQLSCRALVVTMSTAVFSK--IAYTPDLPQEKIEAVNSFSMRRAGKVLLHMSGRFWPEDAHGVICSECFLPEFWFNSSKGIGHLQPNGDNTLIAEPETEDAVEEDKAQYLITGFAGALYAESFVGVDHDKIIENFLDQLDMIYGTVD--------------------EPKPAHKH------------------------FVRGMYKDW-GDEPWIGGGYAFPRVGQSDTASQDLAAPVDNRIFFAGEATAFEQPGMSVHAAIDTGSR 352          
BLAST of mRNA_H-canaliculatus_M_contigs9272.1.1 vs.
Match: Amino_oxidase (domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3LZZ9_9STRA)

HSP 1 Score: 117 bits (294), Expect = 2.540e-26
Identity = 90/309 (29.13%), Postives = 130/309 (42.07%), Query Frame = 1
Query:    7 SLGQVVDELSDGLERCIRTDWPVAKVDCTTEGLVTVTCRDGRLERGTHVVSALPLSVLQDGDVEFSPALPEAKVTAFQRMGMCSVVKVILKFDRPVLPPLLHGCICSESFIPEFWFRHMPNV----PEGGYTM-----------------LAVGFTAGPPSEAASALTHEEALKRALDQLDDMFGDREWLTGGRCTGKGDWEASTGTATSKEGRQHEAAEQKGVGAEACEEKAVELPSTGY-VGGLVHDWVKDEPFVRGGYCYPRVGFDENTHADAAASVGGRLFFAGEHTN-TPTGMTVHAAIDSGER 864
            S  + VD  ++G+    R +WPV+ VD +    + VT   G+      +V  +  +V     + + PALP+ K+ A +   M    KV+L       P   HG ICSE F+PEFWF     +    P G  T+                 L  GF     +E+   + H++ ++  LDQLD ++G  +  T                                             P+  Y V G+  DW  DEP++ GGY +PRVG  +    D AA V  R+FFAGE T     GM+VHAAID+G R
Sbjct:  212 SFMRFVDLFAEGVTT--RLNWPVSSVDYSQSDRIVVTSTSGKQLSCRTLVVTVATAVF--AKIAYKPALPQEKIEAVKSFDMRRAGKVLLHMSGRFWPEDAHGVICSECFLPEFWFNSSKGIGHLQPNGDKTLITEPEIEDALEDDKAQYLITGFAGALYAESFVGVDHDKIIENFLDQLDMIYGTVDEPT---------------------------------------------PAHKYFVRGMYKDW-GDEPWIGGGYAFPRVGQSDTASQDLAAPVDNRIFFAGEATAFEQPGMSVHAAIDTGTR 470          
BLAST of mRNA_H-canaliculatus_M_contigs9272.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B442_HYAAE)

HSP 1 Score: 114 bits (285), Expect = 3.550e-25
Identity = 91/307 (29.64%), Postives = 131/307 (42.67%), Query Frame = 1
Query:    7 SLGQVVDELSDGLERCIRTDWPVAKVDCTTEGLVTVTCRDGR-LERGTHVVSALPLSVLQDGDVEFSPALPEAKVTAFQRMGMCSVVKVILKFDRPVLPPLLHGCICSESFIPEFWFR------HMP------------NVPEGGYTM-LAVGFTAGPPSEAASALTHEEALKRALDQLDDMFGDREWLTGGRCTGKGDWEASTGTATSKEGRQHEAAEQKGVGAEACEEKAVELPSTGYVGGLVHDWVKDEPFVRGGYCYPRVGFDENTHADAAASVGGRLFFAGEHTN-TPTGMTVHAAIDSGER 864
            S  + V+  +DG+    R +WPV  VD +    + VT   GR L   T VV+   +S      + ++P  PE K+ A     M    KV+L   R   P   HG +CS+ F+PEFWF       H+             N  E G T  L  GF +   +E    + HE+  +  LDQLD ++G+ +                                      E C           +V G+  D+  +EP++ GGY +PRVG  ++   D AA V  R+FFAGE T     GM+VHAA+D+G R
Sbjct:  187 SFTRFVEHFADGVTT--RLNWPVTSVDYSQSNRIVVTGTSGRQLSCSTLVVT---VSTAVFSKIAYTPPFPEIKIKAVNSFDMRRAGKVLLHVSRRFWPEDAHGVVCSDCFLPEFWFNSTQGIGHLKPNGDKLCTGMEANKHEDGKTQYLITGFVSAAYAETFVGVPHEKIFEGFLDQLDMIYGNVD--------------------------------------EPCPAHKF------FVKGMYKDF-GNEPWIGGGYAFPRVGQSDSASQDLAAPVDNRIFFAGEATAYEQPGMSVHAAVDTGTR 443          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs9272.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Amine1.690e-15372.24oxidase-like protein n=1 Tax=Ectocarpus siliculosu... [more]
PAO2.020e-13772.26protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Amino_oxidase5.110e-4735.55domain-containing protein (Fragment) n=1 Tax=Tribo... [more]
Amine2.370e-3332.88oxidase-like protein n=1 Tax=Volvox carteri f. nag... [more]
Amine2.900e-3031.23oxidase n=1 Tax=Coccomyxa subellipsoidea (strain C... [more]
Amine1.820e-2729.08oxidase-like protein n=1 Tax=Plasmopara halstedii ... [more]
Amino_oxidase1.320e-2631.03domain-containing protein n=1 Tax=Phytophthora ram... [more]
Amino_oxidase1.570e-2629.21domain-containing protein n=1 Tax=Phytophthora soj... [more]
Amino_oxidase2.540e-2629.13domain-containing protein n=4 Tax=Phytophthora Tax... [more]
Uncharacterized3.550e-2529.64protein n=1 Tax=Hyaloperonospora arabidopsidis (st... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs9272contigH-canaliculatus_M_contigs9272:1895..4474 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LF22
PFAMsAmino_oxidase,NAD_binding_8
Model size897
Max annot lvl2759|Eukaryota
KEGG koko:K19413
Hectar predicted targeting categoryother localisation
Exons5
Evalue2.77e-154
EggNOG OGsCOG1231@1|root,KOG0029@2759|Eukaryota
Descriptionoxidoreductase activity
Cds size897
COG categoryE
BRITEko00000,ko01000,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854199.0716672-CDS-H-canaliculatus_M_contigs9272:1894..22091696854199.0716672-CDS-H-canaliculatus_M_contigs9272:1894..2209Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9272 1895..2209 -
1696854199.0861573-CDS-H-canaliculatus_M_contigs9272:2464..26901696854199.0861573-CDS-H-canaliculatus_M_contigs9272:2464..2690Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9272 2465..2690 -
1696854199.1064172-CDS-H-canaliculatus_M_contigs9272:2947..31141696854199.1064172-CDS-H-canaliculatus_M_contigs9272:2947..3114Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9272 2948..3114 -
1696854199.1220293-CDS-H-canaliculatus_M_contigs9272:4038..41771696854199.1220293-CDS-H-canaliculatus_M_contigs9272:4038..4177Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9272 4039..4177 -
1696854199.1326787-CDS-H-canaliculatus_M_contigs9272:4424..44741696854199.1326787-CDS-H-canaliculatus_M_contigs9272:4424..4474Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9272 4425..4474 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs9272.1.1prot_H-canaliculatus_M_contigs9272.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs9272 1895..4474 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs9272.1.1

>prot_H-canaliculatus_M_contigs9272.1.1 ID=prot_H-canaliculatus_M_contigs9272.1.1|Name=mRNA_H-canaliculatus_M_contigs9272.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=299bp
QGSLGQVVDELSDGLERCIRTDWPVAKVDCTTEGLVTVTCRDGRLERGTH
VVSALPLSVLQDGDVEFSPALPEAKVTAFQRMGMCSVVKVILKFDRPVLP
PLLHGCICSESFIPEFWFRHMPNVPEGGYTMLAVGFTAGPPSEAASALTH
EEALKRALDQLDDMFGDREWLTGGRCTGKGDWEASTGTATSKEGRQHEAA
EQKGVGAEACEEKAVELPSTGYVGGLVHDWVKDEPFVRGGYCYPRVGFDE
NTHADAAASVGGRLFFAGEHTNTPTGMTVHAAIDSGERWVLGVLPVVYK
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mRNA from alignment at H-canaliculatus_M_contigs9272:1895..4474-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs9272.1.1 ID=mRNA_H-canaliculatus_M_contigs9272.1.1|Name=mRNA_H-canaliculatus_M_contigs9272.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=2580bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9272:1895..4474- (Hapterophycus canaliculatus Oshoro7m male)
CAGGGCTCTTTGGGGCAAGTCGTGGACGAGCTGAGCGACGGACTCGAAAG GTGGGTAGTAAAGGGCGCCGTACCTTTGCAAGAAACCAACGCATTCCGCT GGTGCCCAATTTTGGCATGAGCTCGCTTCGCCTGCGGCATGCTTGGGGTT TGAGCGCGTCGTGCGAGACTGAAAGGTACTTGGGGAAGATGTTGCCGTGC GTTTTTGCAGCAACGGAGGTGCCTACTTCATTATTTTTCCCAATTGGCGC ATCTGCTGGCGTGCGATGCGCAACGTTCCTCTCATACTGGTGAGCAGATG CATCCGGACGGATTGGCCTGTCGCCAAGGTAGACTGCACCACAGAAGGGC TGGTAACGGTGACGTGCAGGGACGGGCGGTTAGAACGGGGCACGCACGTC GTGAGCGCCTTGCCGCTTTCGGTCCTCCAAGATGGGGTAAGTGAGTGTCT CTGTCTCTTGTCTCTTGTCTCTTGCCTGCTGGTTTGAAGCGAATGCGTGG CGGTATCTTGGATCACGCGGTGCAAACCGACGCGCTGAGGGAGCTCGACA CTCGAAGCGATGTAGTTTCAACGCTCCGGCAGCGGTCATGGTTCATTCTG GAGGCCGTGGATGCCTGCATCGTGCTGTTGGTGACTTGTAGATTTGAGTT TGGAAAGAAGTTACTCTGAGATGAGGCTTCATTCGGGGTCGCAAGCAGAA CAGTAGCGCTCACCGCCCCCGTGTCTTACCTACGCCTTACCCATGCCTTG AGGCCGTCGGCACTCCCTCACCTTGGGCCCAAGAAACGTAGACTCATTCG GGTACGTCTTGAGGTAGAAACCGTTCGTAAAAAGGACCATCAGCAGATGT GCTCCGCAGCTCACTTGGTTCTTCGTACCGATACAAAATGAAGGATTTCT CTTCCTGTGGGGAAAGAGGACTGCAGACAACAGCTCATTTGCCACCCCGC CCAACAGATCACATCACTCAGGTCGACCTCGGTCGTTTCCCTGCGGCCGG CCTTAGGGCAGAGGTGCTTATGTACAGAAACACTTACGTGAGCTGTGTGT ACAAGTGCCGGGAACGATACTTCTGAGGAACATGCTTTTCGGCATCCCTT TAGGTACAATAATACTTGCGCGAAAATCGTTGGCTGCTACCTCAAAGGGT TTGGAGGTCTTTTACGGAGGTCTGTTACTGAGTTTGAGAGGAAGTCTCGC GACCATCCCGGAGTGGCGAGGATGCAGTCTGCGTCGTTTTTCTGCGAAGC ATGTTACTCAGCTGTCGCAGGCTTTTACTCGAGGAATTCAACGATAGTTT GAATCCAGCCTTGTGAACTGAATCGTTTCTCGCACCGGCGCCGTATCGTT GTCGTCACAGGACGTGGAGTTTTCACCCGCACTCCCTGAGGCAAAGGTGA CGGCCTTTCAGCGTATGGGGATGTGCAGCGTTGTGAAAGTCATCCTGAAA TTTGACCGCCCAGTGCTACCACCGCTGCTGCACGGCTGCATCTGTTCGGA GAGTTTCATTCCGGAGTTTTGGTTCAGGTGCGGGAGACATCCATGTTAGT CTGACAAGTGCCCTGCGAGCATGATCACATTCGACTGTCCTGGCGGTAAT GCAAGCTTCTCTATTTCACCTCCAAATGTAGTTGCCGAGCATGATATTCA GGAACGTCTCAGGGACGATGACCAACGTGTGCAGGATTTGTGGATGTTTC CATCTCCTTGTGGACTCTTGTACCCTTACTCGTGAAGAACCCTCCCTGTT TCCACCCGGCGTTGCTATTCCGGTGCTGGCGAAGGCACATGCCCAACGTC CCCGAAGGAGGCTACACCATGCTCGCGGTGGGCTTCACCGCGGGCCCCCC ATCAGAAGCAGCGTCCGCTCTGACGCATGAGGAGGCTCTCAAAAGAGCGC TTGACCAGCTGGACGATATGTTCGGAGACCGGGAGTGGCTCACCGGCGGC CGCTGCACCGGAAAAGGTGATTGGGAAGCGTCGACAGGAACAGCCACATC GAAAGAGGGCGTAACCAACGGGAAGGGAGTGGAAAACGGCGACCAGCCAC ACTGCTGTGAAACACAAGACACACTCCGAAGGGATGGATCGGCACGGGGC GGAGAGGAAGCTCAAGGTGAGGCCGCCGGAGAGGGACTCGGGGGCGCCGG CCACCGAGGGCACGGCCGTGAACCAGACCCGATTGAGCCGGGCACTGCAG CGAGGGGGTCGGAGGATGGCGAAGCGAAAAGGGGGCCGGAGAATGGCGCC GTGCAGTGCGGTGAGAGGCAACATGAGGCTGCCGAGCAGAAGGGCGTCGG AGCGGAAGCATGCGAGGAAAAAGCAGTGGAACTTCCGAGTACGGGATACG TGGGCGGCCTTGTTCATGACTGGGTGAAAGACGAGCCGTTCGTGCGAGGT GGATACTGCTACCCGAGGGTTGGCTTCGACGAAAACACTCACGCGGACGC CGCTGCCAGCGTTGGCGGACGTTTGTTCTTTGCTGGAGAGCACACGAACA CGCCGACCGGAATGACGGTCCACGCCGCAATTGACTCAGGGGAAAGGTGG GTTTTGGGAGTTTTGCCTGTGGTTTATAAA
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs9272:1895..4474-

>mRNA_H-canaliculatus_M_contigs9272.1.1 ID=mRNA_H-canaliculatus_M_contigs9272.1.1|Name=mRNA_H-canaliculatus_M_contigs9272.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=897bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9272:1895..4474- (Hapterophycus canaliculatus Oshoro7m male)
CAGGGCTCTTTGGGGCAAGTCGTGGACGAGCTGAGCGACGGACTCGAAAG
ATGCATCCGGACGGATTGGCCTGTCGCCAAGGTAGACTGCACCACAGAAG
GGCTGGTAACGGTGACGTGCAGGGACGGGCGGTTAGAACGGGGCACGCAC
GTCGTGAGCGCCTTGCCGCTTTCGGTCCTCCAAGATGGGGACGTGGAGTT
TTCACCCGCACTCCCTGAGGCAAAGGTGACGGCCTTTCAGCGTATGGGGA
TGTGCAGCGTTGTGAAAGTCATCCTGAAATTTGACCGCCCAGTGCTACCA
CCGCTGCTGCACGGCTGCATCTGTTCGGAGAGTTTCATTCCGGAGTTTTG
GTTCAGGCACATGCCCAACGTCCCCGAAGGAGGCTACACCATGCTCGCGG
TGGGCTTCACCGCGGGCCCCCCATCAGAAGCAGCGTCCGCTCTGACGCAT
GAGGAGGCTCTCAAAAGAGCGCTTGACCAGCTGGACGATATGTTCGGAGA
CCGGGAGTGGCTCACCGGCGGCCGCTGCACCGGAAAAGGTGATTGGGAAG
CGTCGACAGGAACAGCCACATCGAAAGAGGGCAGGCAACATGAGGCTGCC
GAGCAGAAGGGCGTCGGAGCGGAAGCATGCGAGGAAAAAGCAGTGGAACT
TCCGAGTACGGGATACGTGGGCGGCCTTGTTCATGACTGGGTGAAAGACG
AGCCGTTCGTGCGAGGTGGATACTGCTACCCGAGGGTTGGCTTCGACGAA
AACACTCACGCGGACGCCGCTGCCAGCGTTGGCGGACGTTTGTTCTTTGC
TGGAGAGCACACGAACACGCCGACCGGAATGACGGTCCACGCCGCAATTG
ACTCAGGGGAAAGGTGGGTTTTGGGAGTTTTGCCTGTGGTTTATAAA
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