mRNA_H-canaliculatus_M_contigs9271.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
|
Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs9271.1.1 vs.
Match: DUF4205 (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK40_ECTSI) HSP 1 Score: 481 bits (1237), Expect = 2.830e-158 Identity = 314/623 (50.40%), Postives = 382/623 (61.32%), Query Frame = 1
Query: 1 MKSRAEAGEEWPGSREKEWPKQEVRALRQALKDVPAVMEKNERFRRVSALVGGTHSKKECYDKYKELKAEAKFKQTISRNNSAVAAEASNSCRDHRAPKKNTRATNDDGDVALPVGDEFPQTTAAIRRKDEVESASTAAGSLAASAGNRLLSVRNSM--FSSSSSHSTEALGQQQXXXXXXXXXXXSMTSSTFSSVPSE-PREDVKSDSGT----ELGIGCSASRAEKRCESFDQIKTVARSSHVTAPCGEELIMKVEDVGEVEFEDFCPEEELPEADQHY--------------AAGVAQ---ARRGGSYGCADRAGRNSQEQSSPARAEIGRDR--GKAPERWAVTETEANGARALVFGDPLKRFNDAWSEQGFYFCAVDGLRYGLVQAEGGPCGVLAAVQAFLLEDMVFGNCSGCEWRNPKRSQRERSLASALTSIIWRAGDGNTATLALSEGSATVQRSNHYRPDGYTERLKLYRVGSRRALEGLVLDNLSHYTKKKASRGVGVILLVYSCIFGRGTEAVREDMDRGFGEAPTLMANHGYASQELVNLVLLGRAHSNVFDGHHVMGEENTGRKVEGREGRPGVAGGE--------------SASDRVVLTGVPERGRVG 1749
M+ A AGE +RE WPKQ+V+ALRQALKDVPA ++KNERFRRVSALVGG+HSKK CY+KYKELKAEAK KQT R +V+ + RD RA K +DG++ ++A +++ EV S STAAGS+ +S + L S R+S SS SS+S + +Q+ SM S+ SSV S P D+ G G S + +S D+ ++A T EEL+ +V EV+ EDFC +EEL + A G Q G S R G+ + ++P+ G P R AVTE +ANG R LVFG+P KRFNDAW EQGF+FC D LRYGLVQAEGGPCGVLAAVQAF+LED++FG+C+GC+WRNPK+SQRERSL SAL++IIW AGDGNTA LA+SEG ATVQRS+ YRPDG+TER+KL VGSR ALEG+V DNL HYT +K G GVILLVYSC+F RG +AVR DMD F E LMA+HGYASQELVNL+L+GRA SNVFDG VMG E G K G G+ G GE DRVVL GV ERGRVG
Sbjct: 1 MQQEAAAGEARSRTREACWPKQDVKALRQALKDVPAALDKNERFRRVSALVGGSHSKKACYEKYKELKAEAKLKQTTPRT--SVSGASPGDSRDRRAANKKKACAGNDGEIIS------VSPSSAGQQQVEVTSVSTAAGSVTSSTVSGLFSGRSSATTLSSWSSNSADLCARQEQQRQEHIR---SMKSNALSSVSSGLPESDMLETQGNFEGDRRGYYPEKSNSRASNDSIDRPTSLAGGGPQTTKHEEELM----EVEEVDVEDFCLDEELVVEPRRRVXXXXXXXXPHTRRAEGGRQDWNPAAGNSGAGFHRTGQGDSQATTPSXXXXXXXXXXGGLPGRTAVTEVQANGVRELVFGNPSKRFNDAWREQGFFFCGEDFLRYGLVQAEGGPCGVLAAVQAFVLEDLIFGDCAGCDWRNPKKSQRERSLTSALSTIIWSAGDGNTAVLAVSEGGATVQRSSRYRPDGFTERVKLIHVGSRSALEGVVRDNLHHYTNRK---GQGVILLVYSCVFSRGVDAVRGDMDNSFDEPSPLMASHGYASQELVNLLLVGRARSNVFDGCRVMGGEGGGAKA-GAGGKEGCEDGERGQKQGHQKEEDEGGGDDRVVLRGVSERGRVG 604
BLAST of mRNA_H-canaliculatus_M_contigs9271.1.1 vs.
Match: DUF4205 (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIJ1_9PHAE) HSP 1 Score: 470 bits (1210), Expect = 1.810e-154 Identity = 304/609 (49.92%), Postives = 369/609 (60.59%), Query Frame = 1
Query: 70 VRALRQALKDVPAVMEKNERFRRVSALVGGTHSKKECYDKYKELKAEAKFKQTISRNNSAVAAEASNSCRDHRAPKKNTRATNDDGDVALPVGDEFPQTTAAIRRKDEVESASTAAGSLAASAGNRLLSVRNSM--FSSSSSHSTEALGQQQXXXXXXXXXXXSMTSSTFSSVPSEPREDVKSD-----SGTELGIGCSASRAEKRCESFDQIKTVARSSHVTAPCGEELIMKVEDVGEVEFEDFCPEEELPEADQHYAAGVAQAR-----RGGSYGCAD-------------RAGRNSQEQSSPARA--EIGRDRGKAPERWAVTETEANGARALVFGDPLKRFNDAWSEQGFYFCAVDGLRYGLVQAEGGPCGVLAAVQAFLLEDMVFGNCSGCEWRNPKRSQRERSLASALTSIIWRAGDGNTATLALSEGSATVQRSNHYRPDGYTERLKLYRVGSRRALEGLVLDNLSHYTKKKAS------RGVGVILLVYSCIFGRGTEAVREDMDRGFGEAPTLMANHGYASQELVNLVLLGRAHSNVFDGHHVMGEENTGRKV----------------EGREGRPGVAGGESASDRVVLTGVPERGRVG 1749
V+ALR+ALKDVPA + KNERFRRVSALVGGTH+KK CY+KYKELKAEAK K + RD RA K +T +DG++ + A +++DEV S STAAGS+ +S + L S R+S SS SS S + +Q+ SM S+ SSV S P E K D G G S + +S D+ ++A TA EEL+ +V EV+ EDFC +EEL + R GC D G+ + + P+ A + GR G+ P R AVTE +ANG R LVFG+P KRFNDAW EQGF+FC + LRYGLVQ +GGPCGVLAAVQAFLLEDM+FG+C+GC+WRNPK+SQRE SL SAL++IIWRAGDGNTA LA+SEG ATVQ S+ YRPDG+TERLKL RVGSR ALEG++ DNL HYT K + +G GVILLVYSC+F RG +AVR DMD F E P LMA+HGYASQELVNL+L+GRA SNVFDG VMG+E G K +G + G GG DRVVLTGV ERGRVG
Sbjct: 5 VKALRRALKDVPATLGKNERFRRVSALVGGTHNKKACYEKYKELKAEAKLKAPPGDS------------RDRRAANKKNSSTGNDGEMIS------VSPSNAEQQQDEVISGSTAAGSVTSSTVSGLFSGRSSATTLSSWSSDSADRCARQEQQRQEHVS---SMKSNALSSVSSGPPESGKLDIHGNFEGDRRGYYPGKSNSRASTDSIDRPTSLAGGGPQTAKHEEELM----EVDEVDVEDFCLDEELVVEPRRRVRXXXXXXXXLHTRRAEGGCQDWNPAPGNSGAGFRHTGQGDNQATIPSSAGGDGGRGSGELPGRTAVTEVQANGVRELVFGNPSKRFNDAWREQGFFFCGEEFLRYGLVQVKGGPCGVLAAVQAFLLEDMIFGDCAGCDWRNPKKSQREHSLTSALSTIIWRAGDGNTAVLAVSEGGATVQPSSRYRPDGFTERLKLIRVGSRSALEGVLRDNLHHYTNYKVTWGPCMKKGQGVILLVYSCVFSRGVDAVRGDMDNSFDEPPPLMASHGYASQELVNLLLVGRARSNVFDGCRVMGDEGGGSKAGAGGKKGYEDRKRGQKQGHQKEEGEGGG---GDRVVLTGVSERGRVG 585
BLAST of mRNA_H-canaliculatus_M_contigs9271.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RM61_9STRA) HSP 1 Score: 175 bits (444), Expect = 4.680e-44 Identity = 171/584 (29.28%), Postives = 255/584 (43.66%), Query Frame = 1
Query: 55 WPKQEVRALRQALKDVPAVMEKNERFRRVSALVGGTHSKKECYDKYKELKAEAKFKQTISRNNSAVAAEASNSCRDHRAPKKNTRATNDDGDVALPVGDEFPQTTAAIRRKDEVESASTAAGSLAASAGNRLLSVRNSMFSSSSSHSTEALGQQQXXXXXXXXXXXSMTSSTFSSVPSEPREDVKSDSGTELGIGCSASRAEKRCESFDQIKTVARSSHVTAPCG-EELIMKVEDVGEVEFEDFCPEEELPEADQHYAAGVAQARRGGSYGCADRAGRNSQEQSSPARAEIGRDRGKAPERWAVTETEANGARALVFGDPLKRFNDAWSEQGFYFCAVDGLRYGLVQAEGGPCGVLAAVQAFLLEDMVFGNCSGCEWRNPKRSQRERSLASALTSIIWR---------------AGDG-NTATLALSEGSATVQRSNHYRPDGYTERLKLYR-VGSRRALEGLVLDNLSHYTKKKASRGVGVILLVYSCIFGRGTEAVREDMDRGF-GEAPTLMANHGYASQELVNLVLLGRAHSNVFDGHHVMGEENTGRKVEGREGRPGVAGGESASDRVVLTGVPERGRVG 1749
W ++E+ AL++A+ ++P+ +EK ER+R++S LVG K+ECYDK+KEL RD RA KK ++ D+ D + ++ +S G+R +N ++ + L + S PS S R E ES +++ V +P G M VED E DF ++ V+ AR P + GR PE +++ ++A ++L+FG+ + F AW +QGF F L YGLVQ +GGPCGVLAAV A ++ ++V + W NP ++ +L ++L I+WR +GD NTA L + GS+ R Y+PDG T+RL+L + + + + D+L T AS+G G I L+ + I+ RG + VR DMD GF GE +L+ +HGY SQE VNL+L+G A SNVFDGH + +E V+G + D V L GVPER VG
Sbjct: 29 WSREEISALKRAVSEIPSSVEKQERWRKISKLVG--RGKRECYDKFKEL-------------------------RDARAAKKKSQQLVDEADAVAEAKPTY---------REHYDSG-----------GHR--GAKNDFSATDEEQDEDDLAPKAGRGRDRDMLPAKAASQHSYEFPS------------------SHDRREPPSES--------KAAAVPSPTGGRATTMLVEDCDEDFGMDF------------HSTHVSPAR------------------DLPGQIRSGRPIA-VPE--SLSASDAGALQSLLFGERRRTFPPAWKQQGFVFSKSRDLGYGLVQHQGGPCGVLAAVNAHIIAELVR---TMARWTNPSERAQQDALVASLARILWRCASAPRSSRAAASAASGDRQNTACLCVPWGSSGTDRGPGYQPDGVTDRLRLIQGLTCEEEVRAAIEDHLDALT---ASKGRGAIALLAAAIYSRGIDRVRTDMDEGFAGETRSLLDHHGYLSQEGVNLLLVGTASSNVFDGHRTLHDE-----VQGTQ------------DTVTLGGVPERSEVG 481
BLAST of mRNA_H-canaliculatus_M_contigs9271.1.1 vs.
Match: probable (ubiquitin carboxyl-terminal hydrolase MINDY-4 isoform X1 n=2 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF143B2) HSP 1 Score: 175 bits (443), Expect = 3.060e-43 Identity = 94/215 (43.72%), Postives = 132/215 (61.40%), Query Frame = 1
Query: 976 ANGARALVFGDPLKRFNDAWSEQGFYFCAVDGLRYGLVQAEGGPCGVLAAVQAFLLEDMVFGNCSGCEWR--NPKRSQRERSLASALTSIIWRAGDGNTATLALSEGSATVQRSNHYRPDGYTERLKLYRVGSRRALEGLVLDNLSHYTKKKASRGVGVILLVYSCIFGRGTEAVREDMDRGFGEAPTLMANHGYASQELVNLVLLGRAHSNVFD 1614
A G + L+FG+ F W +Q F FC + GL YG+VQ +GGPCGVLA+VQ F+L+ ++FG G + +P +R ++LASA++ I+WRAGD AT+AL+ G + V + Y+PD TE L LY + +L+ + N++ + +S G ILL+YS I R E VR DMD G TLM HGY +QE+VNL+L G+A SN FD
Sbjct: 384 AMGLKTLIFGNGKTSFAPEWRKQAFSFCDLYGLEYGIVQLKGGPCGVLASVQGFVLKHLLFGVNKGDVKKKLHPSSRERTKALASAISEILWRAGDNKRATVALATGGSNVFGAGRYKPDQLTETLVLYAFKTSESLQNFISQNITQFESDTSS---GCILLLYSVILSRTIERVRSDMDEPNG---TLMGAHGYCTQEMVNLLLTGKAVSNTFD 592
BLAST of mRNA_H-canaliculatus_M_contigs9271.1.1 vs.
Match: Hypothetical (protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2R941_9STRA) HSP 1 Score: 165 bits (418), Expect = 4.490e-41 Identity = 99/276 (35.87%), Postives = 148/276 (53.62%), Query Frame = 1
Query: 937 GKAPERWAVTETEANGARALVFGDPLKR-FNDAWSEQGFYFCAVDGLRYGLVQAEGGPCGVLAAVQAFLLEDMVFGNCSGCEWRNPKRSQRERSLASALTSIIWRAGDGNTATLALSEGSATVQRS---NHYRPDGYTERLKLYRVGSRRALEGLVLDNLSHYTKKKASRGVGVILLVYSCIFGRGTEAVREDMDRGF-GEAPTLMANHGYASQELVNLVLLGRAHSNVFDGHHVMGEENTGRKVEGREGRPGVAGGESASDRVVLTGVPERGRVG 1749
G P ++ +A + LVF D F+ +W QGF+F ++ L+YGLVQ +GGPCGV+AAVQAF+L+ ++FG+ W NP R ++ +L AL +IIW+AG A L + T S YR DG +++ +Y S+ L LV +++ + +K G G ++L+ S I RG ++ D D G+ +L+ NH YA QELVNL+L+G A SNVFDG + E++ D VVL G+ +G+VG
Sbjct: 138 GTVPVGEPISLEQAKLVKKLVFADRKPNVFDVSWKNQGFFFQSIQDLKYGLVQVKGGPCGVIAAVQAFVLKALLFGSKKAQNWENPTRREQVDALIDALCTIIWQAGGNRQARLCIHVPDLTGPASCSSRDYRADGVIDKMLVYATTSKAQLSSLVEEHIGLFMQKS---GPGTVMLLTSLILSRGGVNIKNDFDSAILGDGISLIGNHNYAGQELVNLMLVGYACSNVFDGTRSLSEDD---------------------DSVVLRGIQGQGKVG 389
BLAST of mRNA_H-canaliculatus_M_contigs9271.1.1 vs.
Match: probable (ubiquitin carboxyl-terminal hydrolase MINDY-4 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=UPI000C05334F) HSP 1 Score: 168 bits (425), Expect = 5.200e-41 Identity = 92/213 (43.19%), Postives = 126/213 (59.15%), Query Frame = 1
Query: 982 GARALVFGDPLKRFNDAWSEQGFYFCAVDGLRYGLVQAEGGPCGVLAAVQAFLLEDMVFGNCSGCEWRNPKRSQRERS--LASALTSIIWRAGDGNTATLALSEGSATVQRSNHYRPDGYTERLKLYRVGSRRALEGLVLDNLSHYTKKKASRGVGVILLVYSCIFGRGTEAVREDMDRGFGEAPTLMANHGYASQELVNLVLLGRAHSNVFD 1614
G + L+FG FN W Q F FC + L YG+VQ +GGPCGVLAAVQ F+L+ ++FG G + + S RER+ L SAL+ I+WRAGD TAT+AL G + + Y+PD TE L L+ S +L+ + N++ + K+S G ILL+YS + R + V DMD TLM HGY +QE+VNL++ G+A SN FD
Sbjct: 338 GLKNLIFGTATASFNPEWRNQSFSFCDLYQLEYGIVQLKGGPCGVLAAVQGFVLKHLLFGGKKGDTKKKLQPSSRERTKALTSALSEILWRAGDHKTATVALPTGGSNFFGAGRYKPDQLTEALVLHDFKSSESLQSFLAQNITQFESDKSS---GCILLLYSVMLSRSIQKVILDMDE---PTNTLMGAHGYCTQEMVNLIVTGKASSNTFD 544
BLAST of mRNA_H-canaliculatus_M_contigs9271.1.1 vs.
Match: Ubiquitin (carboxyl-terminal hydrolase MINDY n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4S475_STYPI) HSP 1 Score: 169 bits (427), Expect = 1.350e-40 Identity = 95/219 (43.38%), Postives = 129/219 (58.90%), Query Frame = 1
Query: 967 ETEAN-GARALVFGDPLKRFNDAWSEQGFYFCAVDGLRYGLVQAEGGPCGVLAAVQAFLLEDMVFGNCSGCEWRNPKRSQRERS--LASALTSIIWRAGDGNTATLALSEGSATVQRSNHYRPDGYTERLKLYRVGSRRALEGLVLDNLSHYTKKKASRGVGVILLVYSCIFGRGTEAVREDMDRGFGEAPTLMANHGYASQELVNLVLLGRAHSNVFD 1614
E E N G + L+FG FN W Q F FC + L YG+VQ +GGPCGVLAAVQ F+L+ ++FG G + + S RER+ L SAL+ I+WRAGD TAT+AL G + + Y+PD TE L L+ S +L+ + N++ + K+S G ILL+YS + R + V DMD TLM HGY +QE+VNL++ G+A SN FD
Sbjct: 291 EEELNKGLKNLIFGTATASFNPEWRNQSFSFCDLYQLEYGIVQLKGGPCGVLAAVQGFVLKHLLFGGKKGDTKKKLQPSSRERTKALTSALSEILWRAGDHKTATVALPTGGSNFFGAGRYKPDQLTEALVLHDFKSSESLQSFLAQNITQFESDKSS---GCILLLYSVMLSRSIQKVILDMDE---PTNTLMGAHGYCTQEMVNLIVTGKASSNTFD 503
BLAST of mRNA_H-canaliculatus_M_contigs9271.1.1 vs.
Match: Ubiquitin (carboxyl-terminal hydrolase MINDY n=4 Tax=Crassostrea gigas TaxID=29159 RepID=K1QXR3_CRAGI) HSP 1 Score: 166 bits (421), Expect = 2.380e-40 Identity = 103/266 (38.72%), Postives = 143/266 (53.76%), Query Frame = 1
Query: 961 VTETEANGARALVFGDPLKRFNDAWSEQGFYFCAVDGLRYGLVQAEGGPCGVLAAVQAFLLEDMVFGNCSGCEWR--NPKRSQRERSLASALTSIIWRAGDGNTATLALSEGSATVQR-SNHYRPDGYTERLKLYRVGSRRALEGLVLDNLSHYTKKKASRGVGVILLVYSCIFGRGTEAVREDMDRGFGEAPTLMANHGYASQELVNLVLLGRAHSNVFDGHHVMGEENTGRKVEGREGRPGVAGGESASDRVVLTGVPERGRVG 1749
+T A + L+FG + FND W Q FC + L+YG+VQ +GGPCGVLAA+QA +L++++FG+C R +P +R ++LA+AL I WRAG+ TA + + G A Q + YR D TE L L S L G + N+ H+ GVIL +YS IF R + VREDMD G+ LM HGY +Q++VNL L G+A+SNVF+ K+E G + SD +L GV R +G
Sbjct: 361 ITLQTAINLKTLIFGSATQCFNDEWRYQSLVFCDLPKLQYGIVQKKGGPCGVLAAIQACVLQELLFGDCKIPLKRFGDPTHEERSQALATALAKIFWRAGENKTAVVTIGSGKAVFQGGAPKYRADDLTETLMLNHFKSYEDLLGFLKQNVHHFMTDGTG---GVILTLYSVIFSRYIDQVREDMDEPTGK---LMGAHGYCTQDMVNLYLTGKANSNVFND-----------KIELDSG--------TGSDVTILKGVTGRSNIG 601
BLAST of mRNA_H-canaliculatus_M_contigs9271.1.1 vs.
Match: Ubiquitin (carboxyl-terminal hydrolase MINDY n=4 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8A5I2_CRAVI) HSP 1 Score: 166 bits (419), Expect = 4.530e-40 Identity = 104/266 (39.10%), Postives = 143/266 (53.76%), Query Frame = 1
Query: 961 VTETEANGARALVFGDPLKRFNDAWSEQGFYFCAVDGLRYGLVQAEGGPCGVLAAVQAFLLEDMVFGNCSGCEWR--NPKRSQRERSLASALTSIIWRAGDGNTATLALSEGSATVQR-SNHYRPDGYTERLKLYRVGSRRALEGLVLDNLSHYTKKKASRGVGVILLVYSCIFGRGTEAVREDMDRGFGEAPTLMANHGYASQELVNLVLLGRAHSNVFDGHHVMGEENTGRKVEGREGRPGVAGGESASDRVVLTGVPERGRVG 1749
+T A ++L+FG + FND W Q FC + L+YG+VQ +GGPCGVLAA+QA LL++++FG+C R +P +R +LA+AL I WRAG+ TA +A+ G A Q + YR D TE L L S L + N+ H+ GVIL +YS IF R + VREDMD G+ LM HGY +Q++VNL L G+A+SNVF+ K+E G + SD +L GV R +G
Sbjct: 365 ITLQTAINLKSLIFGSATQCFNDEWRYQSLVFCDLPRLQYGIVQKKGGPCGVLAAIQACLLQELLFGDCRIPLKRFGDPTHEERSLALATALAKIFWRAGENKTAVVAIGSGKAVFQGGATKYRADDITETLMLNHFKSYDDLLNFLRQNVHHFMTDGTG---GVILTLYSVIFSRYIDQVREDMDEPTGK---LMGAHGYCTQDMVNLYLTGKANSNVFND-----------KIELDSG--------TGSDVTILKGVSGRSNIG 605
BLAST of mRNA_H-canaliculatus_M_contigs9271.1.1 vs.
Match: protein (FAM188B-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E4CDAE) HSP 1 Score: 167 bits (422), Expect = 5.490e-40 Identity = 94/217 (43.32%), Postives = 125/217 (57.60%), Query Frame = 1
Query: 976 ANGARALVFGDPLKRFNDAWSEQGFYFCAVDGLRYGLVQAEGGPCGVLAAVQAFLLEDMVFGNCSGCEWRNPKRSQRERS--LASALTSIIWRAGDGNTATLALSEGSATVQRSNHYRPDGYTERLKLYRVGSRRALEGLVLDNLSHYTKKKASRGVGVILLVYSCIFGRGTEAVREDMDRGFGEAPT--LMANHGYASQELVNLVLLGRAHSNVFD 1614
A G + L+FG F W Q F FC + L YG+VQ +GGPCGVLAAVQ F+++ ++FG G + + S RER+ L SA++ I+WRAGD AT+AL G + + Y+PD TE L LY S +L + N+S + K+S G ILL+YS I R + V DMD PT LM HGY +QE+VNLV+ G+A SN FD
Sbjct: 709 AMGLKNLIFGTATTSFTPEWRNQSFSFCDLYRLEYGIVQLKGGPCGVLAAVQGFIIKHLLFGGKKGDTKKKLQPSSRERTKALTSAISEILWRAGDSKEATVALPTGGSNFFGAGRYKPDQLTEALVLYTFKSSESLHSFLSQNISQFESDKSS---GCILLLYSVILSRSIQTVISDMDE-----PTNMLMGAHGYCTQEMVNLVITGKAVSNAFD 917 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs9271.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs9271.1.1 >prot_H-canaliculatus_M_contigs9271.1.1 ID=prot_H-canaliculatus_M_contigs9271.1.1|Name=mRNA_H-canaliculatus_M_contigs9271.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=583bp MKSRAEAGEEWPGSREKEWPKQEVRALRQALKDVPAVMEKNERFRRVSALback to top mRNA from alignment at H-canaliculatus_M_contigs9271:1..4623- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs9271.1.1 ID=mRNA_H-canaliculatus_M_contigs9271.1.1|Name=mRNA_H-canaliculatus_M_contigs9271.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=4623bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9271:1..4623- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs9271:1..4623- >mRNA_H-canaliculatus_M_contigs9271.1.1 ID=mRNA_H-canaliculatus_M_contigs9271.1.1|Name=mRNA_H-canaliculatus_M_contigs9271.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=1749bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9271:1..4623- (Hapterophycus canaliculatus Oshoro7m male)back to top |