mRNA_H-canaliculatus_M_contigs9136.3.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs9136.3.1 vs.
Match: Tub (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYS0_ECTSI) HSP 1 Score: 135 bits (341), Expect = 1.910e-35 Identity = 69/91 (75.82%), Postives = 71/91 (78.02%), Query Frame = 1
Query: 1 MFLLQSREPTYTNGNYRLNFHGRVTVPSVKNFQLVSPDDLLHTVRGKIELLTTNIDYRFIPQVGEDRFHLDYRAPINAFQAFCISLAQFNF 273
MFLLQSREPTYT GNYRLNFHGRVTVPSVKNFQLVSPDD LHTV +VGEDRFHLDYRAPINAFQA CIS+AQFNF
Sbjct: 517 MFLLQSREPTYTKGNYRLNFHGRVTVPSVKNFQLVSPDDALHTVCQ-------------FGKVGEDRFHLDYRAPINAFQALCISIAQFNF 594
BLAST of mRNA_H-canaliculatus_M_contigs9136.3.1 vs.
Match: Tubby (C-terminal-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9X0_9STRA) HSP 1 Score: 112 bits (279), Expect = 9.560e-29 Identity = 56/91 (61.54%), Postives = 70/91 (76.92%), Query Frame = 1
Query: 1 MFLLQSREPTYTNGNYRLNFHGRVTVPSVKNFQLVSPDDLLHTVRGKIELLTTNIDYRFIPQVGEDRFHLDYRAPINAFQAFCISLAQFNF 273
MFLLQ+++P + NGNYRLNF GRVTVPSVKNFQLV+PDD+ + V G+ +VG+DRFHLD+RAP+NAFQAF I+L+QFNF
Sbjct: 153 MFLLQTKDPVFENGNYRLNFRGRVTVPSVKNFQLVAPDDVDYIV-GQFG------------KVGDDRFHLDFRAPLNAFQAFAIALSQFNF 230
BLAST of mRNA_H-canaliculatus_M_contigs9136.3.1 vs.
Match: Tulp3 (protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Y244_SYMMI) HSP 1 Score: 107 bits (266), Expect = 1.270e-27 Identity = 55/92 (59.78%), Postives = 64/92 (69.57%), Query Frame = 1
Query: 1 MFLLQSREPTYTNGNYRLNFHGRVTVPSVKNFQLVSPDDLLHTVR--GKIELLTTNIDYRFIPQVGEDRFHLDYRAPINAFQAFCISLAQFN 270
MFLL S+EP Y NGNYRLNFHGRV+VPSVKNFQL SPDD H + GKI G+DRFHLDY+AP+NAFQAF ++L F+
Sbjct: 78 MFLLASKEPVYENGNYRLNFHGRVSVPSVKNFQLSSPDDPGHVICQFGKI---------------GDDRFHLDYKAPLNAFQAFSLALCHFD 154
BLAST of mRNA_H-canaliculatus_M_contigs9136.3.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V188_9STRA) HSP 1 Score: 106 bits (264), Expect = 1.030e-26 Identity = 54/93 (58.06%), Postives = 65/93 (69.89%), Query Frame = 1
Query: 1 MFLLQSREPTYTNGNYRLNFHGRVTVPSVKNFQLVSPDDLLHTVR--GKIELLTTNIDYRFIPQVGEDRFHLDYRAPINAFQAFCISLAQFNF 273
MF LQ+++P + GNYRLNFHGRVTV SVKNFQL SPDD+ + V GK++ EDRFHLDYRAP+NAFQAF ++L QFNF
Sbjct: 132 MFCLQTKDPVFEKGNYRLNFHGRVTVASVKNFQLCSPDDIDYVVCQFGKVD---------------EDRFHLDYRAPLNAFQAFALALVQFNF 209
BLAST of mRNA_H-canaliculatus_M_contigs9136.3.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YIB9_HETAK) HSP 1 Score: 106 bits (264), Expect = 2.410e-26 Identity = 54/93 (58.06%), Postives = 64/93 (68.82%), Query Frame = 1
Query: 1 MFLLQSREPTYTNGNYRLNFHGRVTVPSVKNFQLVSPDDLLHTVR--GKIELLTTNIDYRFIPQVGEDRFHLDYRAPINAFQAFCISLAQFNF 273
MF +S++P + GNYRLNFHGRVTV SVKNFQLVSPDD+ + V GK++ EDRFHLDYRAP NAFQAF ++L QFNF
Sbjct: 169 MFYFESKDPVFEKGNYRLNFHGRVTVASVKNFQLVSPDDIDYVVCQFGKVD---------------EDRFHLDYRAPFNAFQAFAVTLCQFNF 246
BLAST of mRNA_H-canaliculatus_M_contigs9136.3.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GC62_9STRA) HSP 1 Score: 100 bits (249), Expect = 4.230e-24 Identity = 48/90 (53.33%), Postives = 62/90 (68.89%), Query Frame = 1
Query: 10 LQSREPTYTNGNYRLNFHGRVTVPSVKNFQLVSPDDLLHTVR--GKIELLTTNIDYRFIPQVGEDRFHLDYRAPINAFQAFCISLAQFNF 273
L+ +EP + NGNYRLNFHGRVTVPSVKNFQLV P D+ + GK++ +DRFHLD++ P+N FQAFC++LAQFN+
Sbjct: 173 LERKEPVFENGNYRLNFHGRVTVPSVKNFQLVDPRDVADVICQFGKVD---------------DDRFHLDFKGPLNPFQAFCVALAQFNY 247
BLAST of mRNA_H-canaliculatus_M_contigs9136.3.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D0G1_9STRA) HSP 1 Score: 100 bits (249), Expect = 6.730e-23 Identity = 48/90 (53.33%), Postives = 62/90 (68.89%), Query Frame = 1
Query: 10 LQSREPTYTNGNYRLNFHGRVTVPSVKNFQLVSPDDLLHTVR--GKIELLTTNIDYRFIPQVGEDRFHLDYRAPINAFQAFCISLAQFNF 273
L+ +EP + NGNYRLNFHGRVTVPSVKNFQLV P D+ + GK++ +DRFHLD++ P+N FQAFC++LAQFN+
Sbjct: 392 LERKEPVFENGNYRLNFHGRVTVPSVKNFQLVDPRDVADVICQFGKVD---------------DDRFHLDFKGPLNPFQAFCVALAQFNY 466
BLAST of mRNA_H-canaliculatus_M_contigs9136.3.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H5B0_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 1.920e-22 Identity = 49/89 (55.06%), Postives = 64/89 (71.91%), Query Frame = 1
Query: 7 LLQSREPTYTNGNYRLNFHGRVTVPSVKNFQLVSPDDLLHTVRGKIELLTTNIDYRFIPQVGEDRFHLDYRAPINAFQAFCISLAQFNF 273
+ + +EP + NGNYRLNF GRVTVPSVKNFQLVS DD+ ++I +F +V +DRFHLD++ P+NAFQAFC+ LAQFN+
Sbjct: 353 VFERKEPVFENGNYRLNFRGRVTVPSVKNFQLVSTDDV------------SDIKCQF-GKVADDRFHLDFKHPMNAFQAFCVCLAQFNY 428
BLAST of mRNA_H-canaliculatus_M_contigs9136.3.1 vs.
Match: Tub (domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6V0_PYTIN) HSP 1 Score: 79.0 bits (193), Expect = 5.620e-17 Identity = 45/99 (45.45%), Postives = 58/99 (58.59%), Query Frame = 1
Query: 7 LLQSREPTYTNGNYRLNFHGRVTVPSVKNFQLVSPDDLLHTVRGKIELLTTNIDYRFIP-----------QVGEDRFHLDYRAPINAFQAFCISLAQFN 270
+ Q++ P + NG YRLNF+GRV VPSVKNFQLV + L + +I+ +T P +V E FHLD+RAPI QAF I+LAQFN
Sbjct: 21 VFQNKXPVFENGFYRLNFNGRVQVPSVKNFQLVEAELPLDSDGNRIQSGSTTGSMFATPASTPTVALQFGKVDETTFHLDFRAPITPIQAFAIALAQFN 119
BLAST of mRNA_H-canaliculatus_M_contigs9136.3.1 vs.
Match: Tub (domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WNH4_GLOUD) HSP 1 Score: 83.6 bits (205), Expect = 7.450e-17 Identity = 43/88 (48.86%), Postives = 57/88 (64.77%), Query Frame = 1
Query: 7 LLQSREPTYTNGNYRLNFHGRVTVPSVKNFQLVSPDDLLHTVRGKIELLTTNIDYRFIPQVGEDRFHLDYRAPINAFQAFCISLAQFN 270
+ +++EP + NG YRLNF+GRV+VPSVKNFQLV +T G T Y +V + +FHLD+RAP+ QAF I+LAQFN
Sbjct: 344 VFENKEPVFDNGFYRLNFNGRVSVPSVKNFQLVRQSSNGNT--GAAAKAETETVYLQFGKVDDKKFHLDFRAPLTPLQAFAIALAQFN 429 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs9136.3.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs9136.3.1 >prot_H-canaliculatus_M_contigs9136.3.1 ID=prot_H-canaliculatus_M_contigs9136.3.1|Name=mRNA_H-canaliculatus_M_contigs9136.3.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=92bp MFLLQSREPTYTNGNYRLNFHGRVTVPSVKNFQLVSPDDLLHTVRGKIELback to top mRNA from alignment at H-canaliculatus_M_contigs9136:4054..4791- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs9136.3.1 ID=mRNA_H-canaliculatus_M_contigs9136.3.1|Name=mRNA_H-canaliculatus_M_contigs9136.3.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=738bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9136:4054..4791- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs9136:4054..4791- >mRNA_H-canaliculatus_M_contigs9136.3.1 ID=mRNA_H-canaliculatus_M_contigs9136.3.1|Name=mRNA_H-canaliculatus_M_contigs9136.3.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=276bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9136:4054..4791- (Hapterophycus canaliculatus Oshoro7m male)back to top |