mRNA_H-canaliculatus_M_contigs9056.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs9056.1.1
Unique NamemRNA_H-canaliculatus_M_contigs9056.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs9056.1.1 vs.
Match: ELM2 (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9E6_ECTSI)

HSP 1 Score: 419 bits (1078), Expect = 3.570e-135
Identity = 237/385 (61.56%), Postives = 281/385 (72.99%), Query Frame = 1
Query:  688 EPAEATAPEVAREAAPESPLSTSTRYSPPARPRRLAMPPDETSIDDGSAGEAEAHAATASAGEKRKSLLRGGPLIRAAHAGDNDTEEGGESPNAEEYPQKEIKIGEDHQAEIPGVLMTETERGVERAAME-IGEMGGTRVWSSARDWTATERERLDNFFEQAKLAVDAKRTQPGVPALIGISNGGDRRRKRKVAWAVMAGGAPTEEGKLRVTCAGPEILEVSRDDVRPVQVEELAMHALMQAREG-KEG-GHLLDDPRPALNLLE-TAVDDSGPLATWAGPQIAAISEALETHFDFDRYVRSRGHDRHRDEHTDITSLIGCVDGKTPSQVLSFYYRCMATGDALTDVLKAAEAPPKARVERKSMRPRVPPPPPGDPPLNLRPRPA 1830
            EP  AT P     A+  S L  + +   PARPRRLAMPP +++   G  G A    A    G K +  LR G LIRAAHAG+ ++E+G +SP  E+YPQKE  +GEDHQA+IP +L+TE ER  ++AAME   EMGGT VWSS RDWTA+ERERLD + E+A+ A D KR  PGVPALI I+NGGDRRRKRK+AWAVMAGG P +E KLRV CAG  + EVSR +++P QVEELAM ALMQ   G K+G G L+D+ R AL LL+ T VDDSGPLATW GPQI A+S+ALETHFD DR+ RSRGH+RHRDEHTD+TSLI  VDGKTPSQVLSFYYR MATGDALT+V+ +AEA  K R ER+S   R PP P   PP NLR RP+
Sbjct:  160 EPTAATKPGAPEAASDTSSLDRTAKR--PARPRRLAMPPADSATGLGGGGGARVEEA---GGRKCQQQLRSGLLIRAAHAGE-ESEDGLDSPKLEQYPQKETNVGEDHQADIPSMLLTEAERAADKAAMEETAEMGGTAVWSSVRDWTASERERLDGYLEEARRAADEKRMSPGVPALISINNGGDRRRKRKMAWAVMAGGKPEDEEKLRVGCAGGGVSEVSRRELQPTQVEELAMQALMQEDAGNKKGKGSLMDNTRTALGLLDNTMVDDSGPLATWTGPQIEALSKALETHFDADRFTRSRGHERHRDEHTDVTSLIASVDGKTPSQVLSFYYRYMATGDALTEVMGSAEAQAKVRSERRSASLRGPPAPRPSPPPNLRHRPS 538          
BLAST of mRNA_H-canaliculatus_M_contigs9056.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2H5_9PHAE)

HSP 1 Score: 408 bits (1049), Expect = 3.970e-124
Identity = 325/582 (55.84%), Postives = 378/582 (64.95%), Query Frame = 1
Query:  103 TLFLGRSYDPFSTVFGVLPANHPALVQLRAREKTERGSSGKEMTGG--RPYRGXXXXXXXXXXXNGGRAGVVRKGLASASLLVPSPMRRAAGRTGGRNSRNGTSXXXXXXXXXXXISXGYSXXXXXXXXXXXXXXXXXXSNGEFAGEDSQDDDALDEDNXXXXXXXXXXXXASYHPKTRXXXXXXXXXXXXXXXXXAEPAEATAPEVAREAAPESPLSTSTRYSPPARPRRLAMPPDETSIDDGSAGEAEAHAATASAGEKRKSLLRGGPLIRAAHAGDNDTEEGGESPNAEEYPQKEIKIGEDHQAEIPGVLMTETERGVERAAMEIG-EMGGTRVWSSARDWTATERERLDNFFEQAKLAVDAKRTQPGVPALIGISNGGDRRRKRKVAWAVMAGGAPTEEGKLRVTCAGPEILEVSRDDVRPVQVEELAMHALMQAREG-KEG-GHLLDDPRPALNLLE-TAVDDSGPLATWAGPQIAAISEALETHFDFDRYVRSRGHDRHRDEHTDITSLIGCVDGKTPSQVLSFYYRCMATGDALTDVLKAAEAPPKARVERKSMRPRVPPPPPGDPPLNLRPRPA 1830
            TL L R+YDPFST   +LP +HP +VQLRARE+   G SG+   GG  R   G             GRAG  RKGL  A L+V       A             XXXXXXXXXXX  X   XXXXXXXXXXXXXXXXXX                    XXXXXXXXXXXX        XXXXXXXXXX        EP  AT P  A EAA ++P    T    PARPRRLAMPP +++   G  G      A    G K +  LRGG LIRAAH G+ ++ +G +SP  E+YPQKE  +G DHQA+IP +L+TE ER  ++AAME   EMGGT VWSS RDWTA+ERERLD + E+A+ A D KR  PGVPALI I+NGGDRRRKRK+AWAVMAGG P ++ KL VTCAG  + EVSR +++P QVEELAM ALM+   G K+G G L+D+ R AL LL+ T VDDSGPLATW GPQI A+S+ALE +FD DR+ RSRGH+RHRDEHTD+TSLI  VDGKTPSQVLSFYYR MATGDALT+V+ +AEA  K R ER+S   R PP P   PP NLR RP+
Sbjct:  129 TLRLARAYDPFSTEVSILPTDHPVVVQLRARERA--GGSGRLKAGGCLRDAHGCPRNSDC------GRAGAQRKGLGGARLVV-------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEALIKAEEPTAATKPG-AHEAASDTPSWDRTAKR-PARPRRLAMPPADSATGLGDGGSVRVEEAR---GTKCQQQLRGGLLIRAAHPGE-ESADGLDSPKLEQYPQKETNVGIDHQADIPSMLLTEAERAADKAAMEETLEMGGTAVWSSVRDWTASERERLDGYLEEARRAADEKRMSPGVPALISINNGGDRRRKRKIAWAVMAGGKPEDKEKLLVTCAGGGVSEVSRSELQPTQVEELAMQALMREDAGNKKGKGSLIDNARTALGLLDNTMVDDSGPLATWTGPQIEALSKALEANFDPDRFTRSRGHERHRDEHTDVTSLIASVDGKTPSQVLSFYYRYMATGDALTEVMGSAEAQAKVRSERRSASLRGPPVPRPSPPPNLRHRPS 689          
BLAST of mRNA_H-canaliculatus_M_contigs9056.1.1 vs.
Match: ELM2 (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9E3_ECTSI)

HSP 1 Score: 123 bits (308), Expect = 2.130e-25
Identity = 93/270 (34.44%), Postives = 135/270 (50.00%), Query Frame = 1
Query:  973 EYPQKEIKIGEDHQAEIPGVLMTETERGVERAAMEIGEMGGTRVWSSARDWTATERERLDNFFEQAKLAVDAKRTQPGVPALIGISNGGDRRR----KRKVA-----WAVMAG--GAPTEEGKLRVTCAGPEILEVSRDDVRPVQVEELAMHALMQAREGKEGGHLLDDPRPALNLLETAVDDSGP--LATWAGPQIAAISEALETHFDFDRYVRS---RGHDRHRDEHTDITSLIGCVDGKTPSQVLSFYYRCMATGDALTDVLKAAEA 1734
            +YP +   +G+ +QA+IP +L    ER  + AA      G   VW S RDW    R  L ++ E AK AV AK+++PGV   + +   GD+      K  VA     WAV AG        G  RV C+     EV    ++ VQ EE A+ AL++AR        LDD  PAL +L    D++ P  +  W   Q+  + +AL   ++ DR +      G D  R++  D+  +   V GK+P+QVL F+YR +AT + LTDV+   EA
Sbjct:  291 DYPPQRTLVGDGYQADIPDLLPA-GER--QAAAPTAAGTGAKMVWRSIRDWDPHSRGMLSSYLEAAKKAVQAKQSRPGVAIHVRLGGEGDKGGTPGDKSSVASSYAVWAVTAGRNAGSNARGVARVGCSEMAQTEVPMSAIQRVQCEEEALAALVKAR------CTLDDFDPALKIL--VGDEASPESIQPWTLQQVRTLEQALAKDYNRDRRLHGWAREGMDMDREDFIDLADVSKQVSGKSPTQVLCFFYRYLATAEPLTDVVYGEEA 549          
BLAST of mRNA_H-canaliculatus_M_contigs9056.1.1 vs.
Match: ELM2 (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI2_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 2.340e-25
Identity = 88/270 (32.59%), Postives = 133/270 (49.26%), Query Frame = 1
Query:  985 KEIKIGEDHQAEIPGVLMTETERGVERAAMEIGEMGGTRVWSSARDWTATERERLDNFFEQAKLAVDAKRTQPGVPALIGISNGGDRRRKRK----------VAWAVMAGGAPTEEGKLRVTCAGPEILEVSRDDVRPVQVEELAMHALMQAREGKEGGHLLDDPRPALNLLETAVDDSGPLATWAGPQIAAISEALETHFDFDRYVRS---RGHDRHRDEHTDITSLIGCVDGKTPSQVLSFYYRCMATGDALTDVLKAAEAPPKARVE 1755
            ++I +G+D+QA+IP +L  +  +  + A       G   VW S R+W    R+ L  +   A   +  K+  PGV   + + + G   +  K            WA+MAG      G +RV C+      V    V+ VQ EE A+ AL++AR        LDD RPAL +L+ A  DS  +A WA  Q+  + + LE  F +DR +      G D  +++  D+ ++   V GKTP+QVLSFYYR +A    LTDV+   EA    ++E
Sbjct:  500 RQILVGDDYQADIPALLSAQERK--KEAGHPAAGTGAKMVWRSIRNWDPQSRQMLSTYLHAATDVLQKKQGFPGVAVHVRLGDRGSAAKGDKGVTTSVANSYAVWAIMAG--RHSAGAVRVACSEMAQTTVPISAVQRVQSEEEALAALVKAR------CTLDDFRPALKVLDQASLDS--VAPWALSQVRTLEQVLEKEFKWDRRLHGWAREGMDLEQEDFIDLANVCKQVRGKTPAQVLSFYYRYLAHAKPLTDVVYGKEAAEARKLE 757          
BLAST of mRNA_H-canaliculatus_M_contigs9056.1.1 vs.
Match: BAH (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX23_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 3.000e-24
Identity = 88/270 (32.59%), Postives = 130/270 (48.15%), Query Frame = 1
Query:  973 EYPQKEIKIGEDHQAEIPGVLMTETERGVERAAMEIGEMGGTRVWSSARDWTATERERLDNFFEQAKLAVDAKRTQPGVPALIGISNGGDRR---------RKRKVAWAVMAG--GAPTEEGKLRVTCAGPEILEVSRDDVRPVQVEELAMHALMQAREGKEGGHLLDDPRPALNLLETAVDDSGP--LATWAGPQIAAISEALETHFDFDRYVRS---RGHDRHRDEHTDITSLIGCVDGKTPSQVLSFYYRCMATGDALTDVLKAAEA 1734
            ++P +   +G  +QA+IP +L  E  +    AA      G   VW S RDW    R  L ++ E AK AV AK+++PGV   + +   GD+                WAV AG        G  RV C+     EV    ++ VQ EE A+ AL++AR        LDD  PAL +L    D++ P  +  W   Q+  + +AL    + DR +      G D  R++  D+  +I  + GK+P+QVL F+YR +AT + LTDV+   EA
Sbjct:  493 DFPPRRTLVGNGYQADIPDLLPAEERKA---AAPTSAGTGAKMVWRSIRDWDPHSRGMLSSYLEAAKKAVQAKQSRPGVVVHVRLGGKGDKGGTPGDESSVASSYAVWAVTAGRDAGSNARGVARVGCSEMAQTEVPISAIQRVQCEEEALAALVKAR------CTLDDFDPALKIL--VGDEASPESIQPWTLQQVRTLEQALAKDCNRDRRLHGWAREGMDIDREDLIDLADVIKQIPGKSPTQVLCFFYRYLATAEPLTDVVYGEEA 751          
BLAST of mRNA_H-canaliculatus_M_contigs9056.1.1 vs.
Match: ELM2 (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLS8_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 1.220e-23
Identity = 89/284 (31.34%), Postives = 137/284 (48.24%), Query Frame = 1
Query:  946 EGGESPNAEEYPQKEIKIGEDHQAEIPGVLMTETERGVERAAMEIGEMGGTRVWSSARDWTATERERLDNFFEQAKLAVDAKRTQPGVPALIGISNGGDRRRKRKVA-----------WAVMAGGAPTEEGKLRVTCAGPEILEVSRDDVRPVQVEELAMHALMQAREGKEGGHLLDDPRPALNLLETAVDDSGPLATWAGPQIAAISEALETHFDFDRYVRS---RGHDRHRDEHTDITSLIGCVDGKTPSQVLSFYYRCMATGDALTDVLKAAEAPPKARVE 1755
            +G + P+ +  PQ+ I +G+D+QA+IP +L  E  +  + A       G   VW S R+W    R  L  +   AK  V AK+  PGV   + + + G +      A           WA+  G      G +RV C+     +V    ++ VQ EE A+ AL++AR        LDD +PAL + + A  +S  +  W   Q+  + +ALE HFD +         G D  R++  D+ ++   V GKTP+QVLSF+YR +A    LTDV+   EA    ++E
Sbjct:  492 DGADKPDCD--PQQ-ILVGDDYQADIPDLLSAEDRK--KEAGHPAARTGAKMVWRSIRNWDPQSRHMLSTYLHAAKDVVKAKQASPGVAVHVRLGDAGSKNNGNVEAATTSVAGSYAVWAITVG--CHSAGVIRVACSEIAQTKVPIPAIQRVQSEEQALGALVKAR------CTLDDFKPALKVFDQASMES--VDPWKLSQVRNLKQALEEHFDPNPRSHGWAREGMDLEREDFIDLANVSKQVPGKTPTQVLSFFYRYLAAAKPLTDVVYGKEAAEARKLE 760          
BLAST of mRNA_H-canaliculatus_M_contigs9056.1.1 vs.
Match: BAH (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0T4_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 2.170e-19
Identity = 111/379 (29.29%), Postives = 159/379 (41.95%), Query Frame = 1
Query:  772 PARPRRLAMPPDETS---------------ID-DGSAGEAEAHAATASAGEKRKSLLRG-----------GPLIRAAHA----GDNDTEEGGESPNAEEYPQKEIKIGEDHQAEIPGVLMTETERGVERAAMEIGEMGGTRVWSSARDWTATERERLDNFFEQAKLAVDAKRTQPGVPALIGISNGGDRR------------RKRKVAWAVMAGGAPTEEGKLRVTCAGPEILEVSRDDVRPVQVEELAMHALMQAREGKEGGHLLDDPRPALNLLETAVDDSGPLATWAGPQIAAISEALETHFDFDRYVRSRGH-----DRHRDEHTDITSLIGCVDGKTPSQVLSFYYRCMATGDALTDVLKAAEAPPKARVERKS 1764
            P RPRRLA+PP  T+                D  GS G      + A A     SL+             G   R   A    GDN+  E  E+P+    P +   +GEDHQ +IP +L  E +R    AA      G   VW S RDW    R  L  + + A   V +K+ +PGV   I +  GG                     WA+  G   +  G +RV C+     E+    ++  + EE A+ AL++         +LD+  PAL +L  +      +  W+  Q+  +  AL+   DFD   RS+G      D  R++  DI  +   V GKTP+QVL FY+R +A    LTDV+   EA    + E+ S
Sbjct:  388 PPRPRRLAIPPANTAGAAAKCAGGGAVPHAADVGGSPGSVRTRRSAAGAAGAPPSLMGSSTAPTAELILSGKRKRTPTAKRMEGDNEPCEA-EAPDF--IPPRRTLVGEDHQVDIPDLLPAE-DRSKAAAAGRAEGTGAEMVWQSVRDWDPHSRGMLAGYLQAANTMVRSKQARPGVA--IHVRLGGKNEDGXXXXXXXXXXXXSYAVWALTTG-VSSASGDVRVACSEIAQTEIPASAIQ--RCEEEALEALVKTN------CVLDNFEPALKMLADSTTSPESVQPWSLDQVRTLEAALDK--DFDVNGRSQGWARPGIDMDREDFIDIAKVSKEVPGKTPAQVLQFYFRYLAAARPLTDVVYGPEAAEARKREKLS 749          
BLAST of mRNA_H-canaliculatus_M_contigs9056.1.1 vs.
Match: BAH (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9E4_ECTSI)

HSP 1 Score: 62.4 bits (150), Expect = 2.500e-6
Identity = 46/134 (34.33%), Postives = 67/134 (50.00%), Query Frame = 1
Query: 1378 EELAMHALMQAREGKEGGHLLDDPRPALNLLETAVDDSGPLATWAGPQIAAISEALETHFDFDRYVRSRGH-----DRHRDEHTDITSLIGCVDGKTPSQVLSFYYRCMATGDALTDVLKAAEAPPKARVERKS 1764
            EE A+ AL++         +LD+  PAL +L  +      L  W+  Q+  +  AL+   DFD   RS+G      D  R++  DI  +   V GKTP+QVL FY+R +A    LTDV+   EA    + E+ S
Sbjct:  518 EEAALEALVKTN------CVLDNFEPALKMLADSTTSPESLQPWSLDQVRTLEAALDK--DFDVNGRSQGWARPGIDMDREDCIDIAKVSKEVPGKTPAQVLQFYFRYLAAARPLTDVVYGPEAAEARKREKLS 643          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs9056.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
ELM23.570e-13561.56domain-containing protein n=1 Tax=Ectocarpus silic... [more]
Uncharacterized3.970e-12455.84protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
ELM22.130e-2534.44domain-containing protein n=1 Tax=Ectocarpus silic... [more]
ELM22.340e-2532.59domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
BAH3.000e-2432.59domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
ELM21.220e-2331.34domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
BAH2.170e-1929.29domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
BAH2.500e-634.33domain-containing protein n=1 Tax=Ectocarpus silic... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs9056contigH-canaliculatus_M_contigs9056:700..4821 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start1
Model size1887
Hectar predicted targeting categoryother localisation
Exons6
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-28_000660.1
Cds size1884
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs9056.1.1prot_H-canaliculatus_M_contigs9056.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs9056 703..4821 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854186.8879392-UTR-H-canaliculatus_M_contigs9056:699..7021696854186.8879392-UTR-H-canaliculatus_M_contigs9056:699..702Hapterophycus canaliculatus Oshoro7m maleUTRH-canaliculatus_M_contigs9056 700..702 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854186.8993952-CDS-H-canaliculatus_M_contigs9056:702..18001696854186.8993952-CDS-H-canaliculatus_M_contigs9056:702..1800Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9056 703..1800 +
1696854186.9102805-CDS-H-canaliculatus_M_contigs9056:2268..25411696854186.9102805-CDS-H-canaliculatus_M_contigs9056:2268..2541Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9056 2269..2541 +
1696854186.922755-CDS-H-canaliculatus_M_contigs9056:2990..31371696854186.922755-CDS-H-canaliculatus_M_contigs9056:2990..3137Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9056 2991..3137 +
1696854186.933427-CDS-H-canaliculatus_M_contigs9056:3638..37791696854186.933427-CDS-H-canaliculatus_M_contigs9056:3638..3779Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9056 3639..3779 +
1696854186.9439716-CDS-H-canaliculatus_M_contigs9056:4264..43331696854186.9439716-CDS-H-canaliculatus_M_contigs9056:4264..4333Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9056 4265..4333 +
1696854186.9545825-CDS-H-canaliculatus_M_contigs9056:4665..48211696854186.9545825-CDS-H-canaliculatus_M_contigs9056:4665..4821Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9056 4666..4821 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs9056.1.1

>prot_H-canaliculatus_M_contigs9056.1.1 ID=prot_H-canaliculatus_M_contigs9056.1.1|Name=mRNA_H-canaliculatus_M_contigs9056.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=628bp
MARPAGGARGGLRSKCRSPCRGKGSGRGFDRDETLFLGRSYDPFSTVFGV
LPANHPALVQLRAREKTERGSSGKEMTGGRPYRGRGSSGKSWAGGNGGRA
GVVRKGLASASLLVPSPMRRAAGRTGGRNSRNGTSGSSRSSSSSASISSG
YSSSNASVGGSSGTGCSGSSSNGEFAGEDSQDDDALDEDNDNDDGDGVGS
APASYHPKTRRGRRRQAAALAAVASAKAEPAEATAPEVAREAAPESPLST
STRYSPPARPRRLAMPPDETSIDDGSAGEAEAHAATASAGEKRKSLLRGG
PLIRAAHAGDNDTEEGGESPNAEEYPQKEIKIGEDHQAEIPGVLMTETER
GVERAAMEIGEMGGTRVWSSARDWTATERERLDNFFEQAKLAVDAKRTQP
GVPALIGISNGGDRRRKRKVAWAVMAGGAPTEEGKLRVTCAGPEILEVSR
DDVRPVQVEELAMHALMQAREGKEGGHLLDDPRPALNLLETAVDDSGPLA
TWAGPQIAAISEALETHFDFDRYVRSRGHDRHRDEHTDITSLIGCVDGKT
PSQVLSFYYRCMATGDALTDVLKAAEAPPKARVERKSMRPRVPPPPPGDP
PLNLRPRPAPRGPPRPPGASPLAGPGDS
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mRNA from alignment at H-canaliculatus_M_contigs9056:700..4821+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs9056.1.1 ID=mRNA_H-canaliculatus_M_contigs9056.1.1|Name=mRNA_H-canaliculatus_M_contigs9056.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=4122bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9056:700..4821+ (Hapterophycus canaliculatus Oshoro7m male)
GCCATGGCTCGGCCGGCGGGGGGCGCACGCGGGGGGCTCCGGTCGAAGTG TCGCAGCCCGTGCCGGGGGAAGGGAAGCGGCAGGGGCTTCGATCGGGACG AAACGCTGTTCCTTGGCCGGAGTTACGACCCGTTTTCCACCGTGTTCGGC GTCCTGCCGGCCAACCACCCCGCTCTGGTTCAGCTTCGTGCGCGGGAAAA GACCGAGAGGGGGAGCAGCGGAAAGGAGATGACTGGGGGCCGGCCGTACC GCGGGCGCGGCTCTTCCGGCAAGAGCTGGGCGGGTGGGAACGGCGGGAGA GCGGGGGTTGTGCGGAAAGGCCTTGCCTCTGCGAGCTTGTTGGTTCCCTC CCCGATGCGAAGAGCCGCCGGAAGGACAGGCGGCAGGAACAGCAGGAACG GCACGTCCGGCAGCAGCAGGAGTAGCAGCAGCAGCGCCAGCATCAGCAGC GGCTACAGCAGCAGCAACGCCAGCGTGGGCGGCAGCAGCGGCACCGGCTG CAGCGGCAGCAGCAGCAACGGCGAGTTCGCGGGCGAGGACAGCCAAGACG ACGACGCTCTGGACGAGGACAACGACAACGACGACGGCGATGGTGTCGGC TCGGCCCCCGCGAGCTACCACCCGAAGACGCGGCGCGGACGCCGCAGGCA AGCGGCAGCTTTGGCGGCCGTGGCCTCGGCGAAGGCGGAACCCGCCGAAG CCACAGCGCCGGAGGTGGCCCGAGAGGCAGCGCCGGAGTCGCCCCTGTCC ACGTCGACGAGATATTCGCCGCCTGCCCGTCCGAGACGCCTGGCTATGCC CCCAGACGAGACCAGCATCGACGACGGCAGCGCTGGCGAGGCCGAAGCTC ACGCGGCCACAGCTTCGGCCGGCGAGAAGAGGAAATCCCTGCTGCGGGGA GGGCCGCTGATCCGAGCGGCTCACGCCGGGGACAACGACACGGAGGAAGG AGGGGAGTCGCCGAACGCGGAAGAGTATCCGCAGAAGGAGATCAAGATCG GGGAAGATCACCAGGCGGAAATCCCCGGCGTGCTCATGACGGAGACGGAG CGCGGGGTGGAGAGGGCGGCGATGGAGATTGGCGAGATGGGCGGCACGCG GGTAATTTTTGTCGAGTGCTTCGTGTTTTTTTTTGTCTTGGAGTTATTTT TTGTCTTTTTTGCGCACTGGTTCAAATTCCGTCACGAGTATGCCGCTCTT CAGGACGGCATTCCGGCCTGGATGTTTCTTCGGCGGTTTCGAGGCGTAGA AAAAGAACACCTTGCTGATGGACGTGTTTTGAGAGCCCGGTTGACGGGAA AAGCGATGAATTCGGTGTGAGGCGTTTCATGACAGACCGTGTGGGCGGGC CGGGCCGCCCACCGACCCTCAGCCAACCGGCTCCGAAGGAGCTCGATGGG AAGATTGGGGACTGTCTTATCGCGGAAGGCGGGGCGTCAGTAGTGTCGAG TGCGGCGTCAGTACCGTCAAGACCGCGACGGGCAGTGAAGCGGGGGACCC TGGAAACCCAACTCAACCTCGACCCAACCCAACCCTTTAATCCAACCGAC GGACCATCTCCTCCTGCAGGTGTGGAGCAGCGCGCGAGACTGGACGGCGA CCGAGAGGGAGCGCCTCGACAACTTCTTCGAGCAAGCCAAGCTCGCCGTG GATGCCAAGCGGACGCAGCCGGGCGTCCCGGCGCTGATCGGCATCAGCAA CGGCGGGGACAGGCGGCGGAAGCGCAAGGTGGCGTGGGCCGTGATGGCCG GGGGAGCGCCGACGGAGGAAGGCAAGCTGCGCGTCACTTGCGCGGGCCCG GAGATCTTGGAGGTGTCGCGCGATGATGTTCGGCCCGTCCAGGTGCGTGT TCGCTCCGTGTAGCCGGCTACATACGGGCAGCACTTGTTCCGGGCTTGCG GTTGCTGTTTTTTCCCATGTGGAGTTTCCGCTGTGGAGGCCGAGATCGCG GCGGGGCAGCTGGGCATGCGCGGCTTTTCGTCCCTGTGGGCTCGAACCGC AGCCAACTTCTGCTGGTGAAGGATCGAAGCGCACGCTCGGAGGATCGATA GAAGCTAGTTCGTCGCTGTCGGGAATGGTGTAAATCACATGAAGATCTCT CCCTCCAGTTGCTATGTTGTGCATAGACACTGGCGTCAAAATGCAGCGAA CAACCGCTGCATTTTCGTCAACAGGCTGGCATACCTGCGCCGTCGACAGC CTTGCCCCGTTCGCTTTTGCTGCAAAACTCCAAGTTCCTCCCTATTACAC CCCACCGCTTCCTGGGAATGTCTCCGTGATTGACGTTGTAGGTCGAGGAG CTGGCCATGCACGCTCTCATGCAGGCGAGGGAGGGCAAGGAAGGGGGGCA CCTCCTGGACGACCCCCGCCCCGCTCTCAACCTCCTGGAGACCGCGGTCG ATGACTCGGGGCCCCTGGCGACCTGGGCTGGACCACAGGTGTTCTATTGT GCCATTTCATTCCGTTTATAACTTTTTCTTTTGGTCCCGGGAAGCGTTTG CGCGAGCCGGCATATTCAATATGACGCCTCGGCGCATGCCTCCCTCTTGA GCTGCCGGAGCCGACTTGTACGTCGCACCAGGATTCCAGGCGCTGACAAA ACTCATTCTCGTAAGCCCCAAGAAGTAAGGTCCTCGTCTTGAGTGGGCAC GCGAGTAATACGGACTTGCGTGTGCAGGTTGTGTGGTTGGGCGACAAAGT CATAGGGTGTGCAGAGTCCGATGATCTCCCCGGACGTTCGCAATGCTGAT ACAGTTCTACCTGCTCTGAGTTGCGGCGTAGGGTGATGTCGTAACGAGGA GACTGTGTCCCTGGAGGAAGCGACGTTTCGCTTGCGGGCCGTCTCCGTTC GCCGCCTGCACGAGTGTTGTCCTCGAAAAATGATTTCCTGATCCTCTTTC CCCCCAACCTCGTGGTGCGATCGATCCCTGCCGGCGCAGATCGCGGCTAT TTCTGAAGCCCTCGAGACCCACTTCGACTTCGACCGTTACGTTCGATCGA GGGGCCACGATCGGCACCGCGACGAGCACACCGACATCACGTCCCTCATC GGCTGTGTCGACGGGAAGACGCCCTCACAGGTGCGGCGACGCCCATCCCC GGAACGATCTCGGTTGAAAGCAGCGGTTCAAACAAAGCTAGAAACCTAGC GGTTCAAACGTCTTCCAGACCGGTCGGAGATCGTTCGCTGAGTGTGTGTC GCGGGTCGAGGGCCCTTGTGCGTTTGGCGGGGTCGCTGCCGCTGCTGCCG CTGCTGCTACTGAAAGAAGCGCTTTTGCCAGCGTCCCGAAGGGCCGTGCT CGACCCCGCGTGCGGACAAGGGTTCACTACATCCATGGATTGAAGGCCCC ACCGATTCGCCGCATGTCGCTGACCACTTGTTCCGCTCGCGCTTGCTGAG AAGAGTCGAGAGAGACCATGAAGAAGACGTGCGCACCGCACACACAGCCG TCCTTCAGAGCAAGGCCGAACCATGACGCTTCTGATAACGAGTGCCGTGG CCCTCGTTTCTGCCTCTGCCGCTCTTTTCACGCCGTGGTCCCTTTGCCGC TGCGATCAACGCCAGGTCTTGTCATTTTACTATCGATGCATGGCCACCGG CGACGCGCTGACGGACGTCCTTAAAGCCGCCGAGGTGGGTGTGCGTGCGC GCGCGCGTGCCGGAGGGAGCGCGTGCGACAGAGAAAGGTTGCCGTAGGCC CGATTTTTTTTGCGCCAGATCAGGTAAAGGAACCGGGAGGGTCCGCAAAC GTCCCACCTCTCTCCACCCTGCGTGCCCGCGGCTGCGCACGCATGCACCA GCAACGACGTACAAGCGCCACCAACGCACAACGCTTTCCCCCGTCGTGGA TGGAATCCTCCGGCTGCCTCACATCCCCCCCTTCATCCTCCTTTTTCTCT TCTACCCCGATGCTGGACCCCAACAAAATCGCATGCTGCCCGTTCGGCCG GTCGTCCGTGTTGCAGGCGCCGCCCAAGGCGCGCGTGGAGAGGAAGTCCA TGCGCCCCCGCGTCCCCCCCCCCCCCCCCGGGGACCCCCCCCTGAACCTC AGACCCCGCCCCGCCCCGCGGGGCCCCCCCCGCCCCCCGGGGGCCTCGCC CCTCGCGGGCCCCGGAGACAGC
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs9056:700..4821+

>mRNA_H-canaliculatus_M_contigs9056.1.1 ID=mRNA_H-canaliculatus_M_contigs9056.1.1|Name=mRNA_H-canaliculatus_M_contigs9056.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=1884bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9056:700..4821+ (Hapterophycus canaliculatus Oshoro7m male)
ATGGCTCGGCCGGCGGGGGGCGCACGCGGGGGGCTCCGGTCGAAGTGTCG
CAGCCCGTGCCGGGGGAAGGGAAGCGGCAGGGGCTTCGATCGGGACGAAA
CGCTGTTCCTTGGCCGGAGTTACGACCCGTTTTCCACCGTGTTCGGCGTC
CTGCCGGCCAACCACCCCGCTCTGGTTCAGCTTCGTGCGCGGGAAAAGAC
CGAGAGGGGGAGCAGCGGAAAGGAGATGACTGGGGGCCGGCCGTACCGCG
GGCGCGGCTCTTCCGGCAAGAGCTGGGCGGGTGGGAACGGCGGGAGAGCG
GGGGTTGTGCGGAAAGGCCTTGCCTCTGCGAGCTTGTTGGTTCCCTCCCC
GATGCGAAGAGCCGCCGGAAGGACAGGCGGCAGGAACAGCAGGAACGGCA
CGTCCGGCAGCAGCAGGAGTAGCAGCAGCAGCGCCAGCATCAGCAGCGGC
TACAGCAGCAGCAACGCCAGCGTGGGCGGCAGCAGCGGCACCGGCTGCAG
CGGCAGCAGCAGCAACGGCGAGTTCGCGGGCGAGGACAGCCAAGACGACG
ACGCTCTGGACGAGGACAACGACAACGACGACGGCGATGGTGTCGGCTCG
GCCCCCGCGAGCTACCACCCGAAGACGCGGCGCGGACGCCGCAGGCAAGC
GGCAGCTTTGGCGGCCGTGGCCTCGGCGAAGGCGGAACCCGCCGAAGCCA
CAGCGCCGGAGGTGGCCCGAGAGGCAGCGCCGGAGTCGCCCCTGTCCACG
TCGACGAGATATTCGCCGCCTGCCCGTCCGAGACGCCTGGCTATGCCCCC
AGACGAGACCAGCATCGACGACGGCAGCGCTGGCGAGGCCGAAGCTCACG
CGGCCACAGCTTCGGCCGGCGAGAAGAGGAAATCCCTGCTGCGGGGAGGG
CCGCTGATCCGAGCGGCTCACGCCGGGGACAACGACACGGAGGAAGGAGG
GGAGTCGCCGAACGCGGAAGAGTATCCGCAGAAGGAGATCAAGATCGGGG
AAGATCACCAGGCGGAAATCCCCGGCGTGCTCATGACGGAGACGGAGCGC
GGGGTGGAGAGGGCGGCGATGGAGATTGGCGAGATGGGCGGCACGCGGGT
GTGGAGCAGCGCGCGAGACTGGACGGCGACCGAGAGGGAGCGCCTCGACA
ACTTCTTCGAGCAAGCCAAGCTCGCCGTGGATGCCAAGCGGACGCAGCCG
GGCGTCCCGGCGCTGATCGGCATCAGCAACGGCGGGGACAGGCGGCGGAA
GCGCAAGGTGGCGTGGGCCGTGATGGCCGGGGGAGCGCCGACGGAGGAAG
GCAAGCTGCGCGTCACTTGCGCGGGCCCGGAGATCTTGGAGGTGTCGCGC
GATGATGTTCGGCCCGTCCAGGTCGAGGAGCTGGCCATGCACGCTCTCAT
GCAGGCGAGGGAGGGCAAGGAAGGGGGGCACCTCCTGGACGACCCCCGCC
CCGCTCTCAACCTCCTGGAGACCGCGGTCGATGACTCGGGGCCCCTGGCG
ACCTGGGCTGGACCACAGATCGCGGCTATTTCTGAAGCCCTCGAGACCCA
CTTCGACTTCGACCGTTACGTTCGATCGAGGGGCCACGATCGGCACCGCG
ACGAGCACACCGACATCACGTCCCTCATCGGCTGTGTCGACGGGAAGACG
CCCTCACAGGTCTTGTCATTTTACTATCGATGCATGGCCACCGGCGACGC
GCTGACGGACGTCCTTAAAGCCGCCGAGGCGCCGCCCAAGGCGCGCGTGG
AGAGGAAGTCCATGCGCCCCCGCGTCCCCCCCCCCCCCCCCGGGGACCCC
CCCCTGAACCTCAGACCCCGCCCCGCCCCGCGGGGCCCCCCCCGCCCCCC
GGGGGCCTCGCCCCTCGCGGGCCCCGGAGACAGC
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