mRNA_H-canaliculatus_M_contigs8863.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs8863.1.1
Unique NamemRNA_H-canaliculatus_M_contigs8863.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs8863.1.1 vs.
Match: Putative (peptidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQV2_ECTSI)

HSP 1 Score: 450 bits (1157), Expect = 2.190e-156
Identity = 229/243 (94.24%), Postives = 237/243 (97.53%), Query Frame = 1
Query:   94 ATRKRFNGLLADRFQHPFDLEATGMLRRLPGLELAIRGAVPAIEDAVFMDNIANSILVGPRQMGSLHGLLLEACRILDMEAPDLYIRQNPTPNAYTLAIRGKKPFIVLHTSLVDLMEPEEVQAVIAHELGHLKCEHGIWVTLATVLANGLYRGGFLGAFVAERLGLRRRLMRWSRAAEFTCDRAAMLVSQDVNVVVSTLLKLAGGSVSQASELSVPEFLKQASAYDLASQTRIGRLLKREQSM 822
            A RKRFNGLLADRFQHPFDLEATGMLRR PGLE+AIRGAVPAIEDAVFMDNIANSILVGPRQM SLHGLLLEACRILDM+ PDLYIRQNPTPNAYTLAIRGKKPFIVLHTSL+DLMEPEEVQAVIAHELGHLKCEHGIWVTLATV+ANGLY  GFLGAFVA+RLGLRRRLMRWSRAAEFTCDRAAMLV+QDVNVVVSTLLKLAGGSVSQASELSVPEFLKQASAYDLASQTRIG+LLKREQS+
Sbjct:  118 APRKRFNGLLADRFQHPFDLEATGMLRRFPGLEMAIRGAVPAIEDAVFMDNIANSILVGPRQMASLHGLLLEACRILDMQPPDLYIRQNPTPNAYTLAIRGKKPFIVLHTSLLDLMEPEEVQAVIAHELGHLKCEHGIWVTLATVVANGLYGRGFLGAFVADRLGLRRRLMRWSRAAEFTCDRAAMLVAQDVNVVVSTLLKLAGGSVSQASELSVPEFLKQASAYDLASQTRIGKLLKREQSL 360          
BLAST of mRNA_H-canaliculatus_M_contigs8863.1.1 vs.
Match: Peptidase (family M48-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH31_9STRA)

HSP 1 Score: 322 bits (826), Expect = 8.060e-108
Identity = 158/225 (70.22%), Postives = 187/225 (83.11%), Query Frame = 1
Query:  136 QHPFDLEATGMLRRLPGLELAIRGAVPAIEDAVFMDNIANSILVGPRQMGSLHGLLLEACRILDMEAPDLYIRQNPTPNAYTLAIRGKKPFIVLHTSLVDLMEPEEVQAVIAHELGHLKCEHGIWVTLATVLANGLYRGGF-LGAFVAERLGLRRRLMRWSRAAEFTCDRAAMLVSQDVNVVVSTLLKLAGGSVSQASELSVPEFLKQASAYDLASQTRIGRLLK 807
            QHPFD EAT  L+RLPGLE A+R  +P +ED +++DNIAN++LVGP Q+ S+H  LL+AC ILDM+ P++Y+RQNPTPNAYTLA+ GKKPFIVLH+SL+DLM P E+QAVIAHELGHLKCEHGIW+T A VL +GL R  F LG+ VAE LGLRR L RW   AE +CDRAA+LV+QDVNVVVSTLLKL GGSV  A ELSV EFLKQA AYDLAS+TR+GRLL+
Sbjct:    1 QHPFDQEATAALKRLPGLEAAVRSFIPIVEDTIYLDNIANAVLVGPHQLQSIHKSLLQACAILDMQPPEVYVRQNPTPNAYTLAVSGKKPFIVLHSSLIDLMSPAELQAVIAHELGHLKCEHGIWITAANVLTSGLARSAFGLGSVVAEALGLRRLLQRWRLTAELSCDRAALLVAQDVNVVVSTLLKLVGGSVRNADELSVHEFLKQAKAYDLASRTRLGRLLR 225          
BLAST of mRNA_H-canaliculatus_M_contigs8863.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1X7Z1_HETAK)

HSP 1 Score: 270 bits (689), Expect = 4.140e-86
Identity = 140/247 (56.68%), Postives = 184/247 (74.49%), Query Frame = 1
Query:   94 ATRKRFNGLLADRFQHPFDLEATGMLRRLPGLELAIRGAVPAIEDAVFMDNIANSILVGPRQMGSLHGLLLEACRILDM-EAPDLYIRQNPTPNAYTLAIRGKKPFIVLHTSLVDLMEPEEVQAVIAHELGHLKCEHGIWVTLATVLANGLYR-GGFLGAFVAERLGLRRRLMRWSRAAEFTCDRAAMLVSQDVNVVVSTLLKLAGG----SVSQASELSVPEFLKQASAYDLASQTRIGRLLKREQ 816
            ++R    GL +DRF+HP D +AT  L+RLPGLE  +R A P +E+AV++DNIA SI VGP QM +LH LL++ACRILD+ + P LY++QNP+PNAYTLA++G+KPFIVLHTSL+DLM P+EVQAV+AHELGH+KCEHG+W++ A ++A GL   GG  G  ++E L     +M W RAAE TCDRAA+LV+QD  VVVST+LKL GG    ++ +   +S  EFLKQA  Y  A  +R+GRLL  +Q
Sbjct:   54 SSRVALRGLRSDRFRHPVDRQATAQLQRLPGLEQIVRRATPLVEEAVYLDNIATSIKVGPGQMPALHQLLVDACRILDIKDPPQLYVKQNPSPNAYTLAVQGRKPFIVLHTSLIDLMTPQEVQAVLAHELGHIKCEHGLWLSAANLVALGLLAVGGVPGQLLSEALSS--LIMPWQRAAELTCDRAALLVAQDPAVVVSTILKLVGGVGGPALGEYGGVSPDEFLKQAEEYAEARSSRVGRLLTADQ 298          
BLAST of mRNA_H-canaliculatus_M_contigs8863.1.1 vs.
Match: M48 (family metallopeptidase n=1 Tax=Pleurocapsales cyanobacterium LEGE 06147 TaxID=1828827 RepID=UPI0019DB20E1)

HSP 1 Score: 267 bits (683), Expect = 6.220e-86
Identity = 132/242 (54.55%), Postives = 185/242 (76.45%), Query Frame = 1
Query:   97 TRKRFNGLLADRFQHPFDLEATGMLRRLPGLELAIRGAV-PAIEDAVFMDNIANSILVGPRQMGSLHGLLLEACRILDMEAPDLYIRQNPTPNAYTLAIRGKKPFIVLHTSLVDLMEPEEVQAVIAHELGHLKCEHGIWVTLATVLANGLYRGGFLGAFVAERLGLRRRLMRWSRAAEFTCDRAAMLVSQDVNVVVSTLLKLAGGSVSQASELSVPEFLKQASAYDLASQTRIGRLLKREQS 819
            T+K+  GL AD F+HP DL+AT  L++ PGL++AIR  + P  E   +++NIA+S+LV  +Q+  LH LLLEAC+ILD+E P LY++QNP PNAYT A+RGK+PF+VLHTSL++++ PEE+QAVIAHELGHLKCEHG+++TLA ++          GA +A+   L+ +++RW R AEF+CDRAA+LV+QD  VV+S L+KLAGGS S AS+L++  F++QA AYD   QT++G LLK+ Q+
Sbjct:    4 TKKQLIGLKADDFRHPLDLQATTSLKQFPGLDIAIRSLLGPVAEQFFYLNNIASSVLVSEKQLPYLHKLLLEACQILDLEPPQLYVQQNPVPNAYTFAMRGKQPFMVLHTSLIEMLTPEEIQAVIAHELGHLKCEHGVYLTLANIMVLAATLLPTWGAILAQ--SLQEQMLRWIRCAEFSCDRAALLVTQDPKVVMSVLMKLAGGSPSLASQLNLEAFIEQARAYDAVDQTQLGELLKQAQT 243          
BLAST of mRNA_H-canaliculatus_M_contigs8863.1.1 vs.
Match: M48 (family metallopeptidase n=1 Tax=Oscillatoriaceae cyanobacterium M7585_C2015_266 TaxID=2774341 RepID=UPI0019DC95FF)

HSP 1 Score: 261 bits (668), Expect = 1.160e-83
Identity = 132/236 (55.93%), Postives = 179/236 (75.85%), Query Frame = 1
Query:  115 GLLADRFQHPFDLEATGMLRRLPGLELAIRGAVPAI-EDAVFMDNIANSILVGPRQMGSLHGLLLEACRILDMEAPDLYIRQNPTPNAYTLAIRGKKPFIVLHTSLVDLMEPEEVQAVIAHELGHLKCEHGIWVTLATVLANGLYRGGFLGAFVAERLGLRRRLMRWSRAAEFTCDRAAMLVSQDVNVVVSTLLKLAGGSVSQASELSVPEFLKQASAYDLASQTRIGRLLKREQS 819
            GL AD F+HP DLEAT  L++L GL++ +R  +  I E   ++DNIA+SILVG +Q+  LH LLLEAC+ILDME P +Y+RQ+P PNAYT A+RG++PFIVLHTSL+DL+ P E+QAVIAHELGHLKC+HG+++TLA ++     +    G  +A+  GL+ +LM W R AEFTCDRAA+L +QD +VV+S L+KLAGGS + AS+L+V  FL QA AYD  S +++G +LK+ Q+
Sbjct:   10 GLKADHFRHPLDLEATNSLKQLSGLDILVRNLLGKIGEQFFYLDNIASSILVGEQQLPHLHKLLLEACQILDMEPPQMYVRQHPVPNAYTFAMRGRQPFIVLHTSLIDLLTPTEIQAVIAHELGHLKCDHGVYLTLANLMVLAAGQLPSFGQLIAQ--GLQAQLMMWLRCAEFTCDRAALLATQDPSVVISLLMKLAGGSPTLASQLNVDAFLAQARAYDDISNSQLGEILKQAQT 243          
BLAST of mRNA_H-canaliculatus_M_contigs8863.1.1 vs.
Match: M48 (family metallopeptidase n=5 Tax=Cyanobacteria TaxID=1117 RepID=A0A6M8B6M7_9CYAN)

HSP 1 Score: 260 bits (665), Expect = 3.300e-83
Identity = 133/241 (55.19%), Postives = 180/241 (74.69%), Query Frame = 1
Query:  115 GLLADRFQHPFDLEATGMLRRLPGLELAIRGAVPAIEDAVF-MDNIANSILVGPRQMGSLHGLLLEACRILDMEAPDLYIRQNPTPNAYTLAIRGKKPFIVLHTSLVDLMEPEEVQAVIAHELGHLKCEHGIWVTLATVLANGLYRGGF-LGAFVAERLGLRRRLMRWSRAAEFTCDRAAMLVSQDVNVVVSTLLKLAGGSVSQASELSVPEFLKQASAYDLASQTRIGRLLKREQSMVRS 831
            GL +  F+HP DL+AT  L++LPGL+LAIRG +  + +  F ++N+A+ ILV  RQ+  LH LL EAC+ILD+E P LY+RQNPTPNAYT A+RGK+PF+VLHTSL+DL+ PEE+QAVIAHELGHLKCEH +++T+A +      + G  LG  VA+  GL+ RL+ W R AEFTCDRAA+LV+QD  VV S L+KL GGS + AS+L++  FL+QA AYD  S + +G++L+  Q+  R+
Sbjct:    9 GLQSAHFRHPLDLQATQALQQLPGLDLAIRGLMGPVAEQFFQLENLASGILVSDRQLPQLHELLREACQILDLEPPQLYVRQNPTPNAYTFAMRGKQPFVVLHTSLIDLLTPEEIQAVIAHELGHLKCEHSVYLTMANIAVLAAGQLGLPLGPLVAQ--GLQERLLEWVRCAEFTCDRAALLVAQDARVVASVLMKLTGGSPTLASQLNLDAFLEQARAYDDLSLSDMGKMLRETQTAQRT 247          
BLAST of mRNA_H-canaliculatus_M_contigs8863.1.1 vs.
Match: M48 (family metallopeptidase n=2 Tax=unclassified Microcoleus TaxID=2642155 RepID=UPI0016862122)

HSP 1 Score: 260 bits (665), Expect = 3.300e-83
Identity = 129/236 (54.66%), Postives = 180/236 (76.27%), Query Frame = 1
Query:  115 GLLADRFQHPFDLEATGMLRRLPGLELAIRGAV-PAIEDAVFMDNIANSILVGPRQMGSLHGLLLEACRILDMEAPDLYIRQNPTPNAYTLAIRGKKPFIVLHTSLVDLMEPEEVQAVIAHELGHLKCEHGIWVTLATVLANGLYRGGFLGAFVAERLGLRRRLMRWSRAAEFTCDRAAMLVSQDVNVVVSTLLKLAGGSVSQASELSVPEFLKQASAYDLASQTRIGRLLKREQS 819
            GL AD+F+HP DLEAT  L++LPGL+L +R  + P  E   ++DNIA+S+LVG +Q+  LH LLLEAC+ILD+E P LY+RQ+P PNAYT A+RG++PFIV+HTSL++L+ P E+QAVIAHELGHLKC+HG+++TLA ++     +   LG  +A+   L+ +L+ W R AEFTCDRAA+L +QD  VV+S L+KLAGGS + A +L+V  FL QA AYD  S++++G +LK+ Q+
Sbjct:   10 GLKADQFRHPLDLEATNSLKQLPGLDLLVRNLLGPIGEQFFYLDNIASSVLVGEQQLPHLHQLLLEACKILDLEPPQLYVRQHPVPNAYTFAMRGRQPFIVMHTSLIELLTPPEIQAVIAHELGHLKCDHGVYLTLANLMVLAANQLPNLGGAIAQ--SLQAQLLEWVRCAEFTCDRAALLAAQDPKVVISLLMKLAGGSATLAPQLNVDAFLAQARAYDDISRSQLGEMLKQAQT 243          
BLAST of mRNA_H-canaliculatus_M_contigs8863.1.1 vs.
Match: Peptidase (M48 n=1 Tax=Leptolyngbya sp. 'hensonii' TaxID=1922337 RepID=A0A1Q8Z8A8_9CYAN)

HSP 1 Score: 259 bits (663), Expect = 6.620e-83
Identity = 131/240 (54.58%), Postives = 179/240 (74.58%), Query Frame = 1
Query:  115 GLLADRFQHPFDLEATGMLRRLPGLELAIRGAVPAIEDAVF-MDNIANSILVGPRQMGSLHGLLLEACRILDMEAPDLYIRQNPTPNAYTLAIRGKKPFIVLHTSLVDLMEPEEVQAVIAHELGHLKCEHGIWVTLATVLANGLYRGGFLGAFVAERLGLRRRLMRWSRAAEFTCDRAAMLVSQDVNVVVSTLLKLAGGSVSQASELSVPEFLKQASAYDLASQTRIGRLLKREQSMVRS 831
            GL AD F+HP DLEAT  L+++PGL+L +R  + ++ + VF ++NIA+SILV  RQM  LH LL EAC+ILD+E P+LY+RQNP PNAYT AIRGK+PFIV+HTSL++L+ PEE QAVIAHELGHLKCEH +++TLA ++     +   LG  +A+   L+ +++ W R AEFTCDRAA+L +QD  V++STL+KL GGS S  S+L++  F+ QA AYD  S T +G +LK+ Q+  R+
Sbjct:   10 GLRADHFRHPLDLEATRALKQIPGLDLLVRNLLGSLAEQVFYLENIASSILVSDRQMPQLHTLLQEACQILDLEPPELYVRQNPVPNAYTFAIRGKQPFIVIHTSLLELLTPEETQAVIAHELGHLKCEHSVYLTLANLIILAAGQLPNLGGLLAQ--ALQTQILEWVRCAEFTCDRAALLATQDPRVMMSTLMKLTGGSPSLVSQLNLEAFIDQARAYDQISLTEMGEMLKQAQTAART 247          
BLAST of mRNA_H-canaliculatus_M_contigs8863.1.1 vs.
Match: M48 (family metalloprotease n=1 Tax=Myxacorys almedinensis A TaxID=2690445 RepID=A0A8J7Z7N2_9CYAN)

HSP 1 Score: 259 bits (662), Expect = 9.080e-83
Identity = 134/238 (56.30%), Postives = 180/238 (75.63%), Query Frame = 1
Query:  115 GLLADRFQHPFDLEATGMLRRLPGLELAIRGAV-PAIEDAVFMDNIANSILVGPRQMGSLHGLLLEACRILDMEAPDLYIRQNPTPNAYTLAIRGKKPFIVLHTSLVDLMEPEEVQAVIAHELGHLKCEHGIWVTLAT--VLANGLYRGGFLGAFVAERLGLRRRLMRWSRAAEFTCDRAAMLVSQDVNVVVSTLLKLAGGSVSQASELSVPEFLKQASAYDLASQTRIGRLLKREQS 819
            GL AD+F+HP DLEAT  L++LPGL+L IR  + P  E   +++NIA SILVG +Q+  L+ LL+EACR+LD+E P LY+RQ+P PNAYT A+RGK+PFIV+HTSL++L+ PEEVQAVIAHELGHLKC+HG+++TLA   VLA G + GG L   + +  GL+ ++M W R AEFTCDRAA+L +QD  +++S L+KL GGS S   +L++  F+ QA AYD  S+T IG LLK+ Q+
Sbjct:   10 GLKADQFRHPLDLEATNSLKQLPGLDLIIRNLLGPVAEQFFYLENIAASILVGEQQLPWLYKLLIEACRVLDLEPPQLYVRQHPVPNAYTFAMRGKRPFIVMHTSLIELLTPEEVQAVIAHELGHLKCDHGVYLTLANLLVLAAGQFPGGTL---ITQ--GLQAQIMTWVRCAEFTCDRAALLATQDPTIMMSVLMKLTGGSPSLVGQLNLDAFIAQARAYDDVSKTEIGDLLKQLQT 242          
BLAST of mRNA_H-canaliculatus_M_contigs8863.1.1 vs.
Match: Peptidase (M48 n=2 Tax=Phormidesmis priestleyi TaxID=268141 RepID=A0A2T1DJM8_9CYAN)

HSP 1 Score: 259 bits (661), Expect = 1.290e-82
Identity = 131/238 (55.04%), Postives = 178/238 (74.79%), Query Frame = 1
Query:  115 GLLADRFQHPFDLEATGMLRRLPGLELAIRGAV-PAIEDAVFMDNIANSILVGPRQMGSLHGLLLEACRILDMEAPDLYIRQNPTPNAYTLAIRGKKPFIVLHTSLVDLMEPEEVQAVIAHELGHLKCEHGIWVTLAT--VLANGLYRGGFLGAFVAERLGLRRRLMRWSRAAEFTCDRAAMLVSQDVNVVVSTLLKLAGGSVSQASELSVPEFLKQASAYDLASQTRIGRLLKREQS 819
            GL AD+F+HP DL AT  L++LPGL+L IR  + P  E   +++NIA+SILVG +Q+  +H LLLEACR+LD+E P LY+RQNP PNAYT A+RGK+PFIV+HTSL++L+ PEE+QAVIAHELGHLKC+HG+++TLA   VLA G      LG  +A+   L+ +++ W R AEFTCDRAA+L +QD   ++S ++KL GGS S AS+L++  F+ QA AYD    T +G+LLK+ Q+
Sbjct:   10 GLKADQFRHPLDLAATNSLKQLPGLDLLIRNLLGPVAEQFFYLENIASSILVGEQQLPQIHNLLLEACRVLDLEPPQLYVRQNPVPNAYTFAMRGKQPFIVMHTSLIELLTPEEIQAVIAHELGHLKCDHGVYLTLANIMVLAAGQLP---LGGAIAQ--SLQAQILEWVRCAEFTCDRAALLATQDPKTIMSVMMKLTGGSPSLASQLNLDAFIAQARAYDEVGNTDVGQLLKQMQT 242          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8863.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Putative2.190e-15694.24peptidase n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
Peptidase8.060e-10870.22family M48-domain-containing protein n=1 Tax=Tribo... [more]
Hypothetical4.140e-8656.68protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
M486.220e-8654.55family metallopeptidase n=1 Tax=Pleurocapsales cya... [more]
M481.160e-8355.93family metallopeptidase n=1 Tax=Oscillatoriaceae c... [more]
M483.300e-8355.19family metallopeptidase n=5 Tax=Cyanobacteria TaxI... [more]
M483.300e-8354.66family metallopeptidase n=2 Tax=unclassified Micro... [more]
Peptidase6.620e-8354.58M48 n=1 Tax=Leptolyngbya sp. 'hensonii' TaxID=1922... [more]
M489.080e-8356.30family metalloprotease n=1 Tax=Myxacorys almedinen... [more]
Peptidase1.290e-8255.04M48 n=2 Tax=Phormidesmis priestleyi TaxID=268141 R... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs8863contigH-canaliculatus_M_contigs8863:38..4560 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LQV2
PFAMsPeptidase_M48
Model size837
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons5
Evalue3.6e-157
EggNOG OGsCOG0501@1|root,2QUG6@2759|Eukaryota
DescriptionPeptidase family M48
Cds size837
COG categoryE
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854177.4441366-CDS-H-canaliculatus_M_contigs8863:37..1901696854177.4441366-CDS-H-canaliculatus_M_contigs8863:37..190Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8863 38..190 +
1696854177.4567256-CDS-H-canaliculatus_M_contigs8863:1515..17191696854177.4567256-CDS-H-canaliculatus_M_contigs8863:1515..1719Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8863 1516..1719 +
1696854177.4669626-CDS-H-canaliculatus_M_contigs8863:2685..27781696854177.4669626-CDS-H-canaliculatus_M_contigs8863:2685..2778Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8863 2686..2778 +
1696854177.4825819-CDS-H-canaliculatus_M_contigs8863:3664..39341696854177.4825819-CDS-H-canaliculatus_M_contigs8863:3664..3934Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8863 3665..3934 +
1696854177.4985542-CDS-H-canaliculatus_M_contigs8863:4443..45601696854177.4985542-CDS-H-canaliculatus_M_contigs8863:4443..4560Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8863 4444..4560 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs8863.1.1prot_H-canaliculatus_M_contigs8863.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs8863 38..4560 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs8863.1.1

>prot_H-canaliculatus_M_contigs8863.1.1 ID=prot_H-canaliculatus_M_contigs8863.1.1|Name=mRNA_H-canaliculatus_M_contigs8863.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=279bp
GSGGRDPERKEGQGTEGVETAKATATAAAAAATRKRFNGLLADRFQHPFD
LEATGMLRRLPGLELAIRGAVPAIEDAVFMDNIANSILVGPRQMGSLHGL
LLEACRILDMEAPDLYIRQNPTPNAYTLAIRGKKPFIVLHTSLVDLMEPE
EVQAVIAHELGHLKCEHGIWVTLATVLANGLYRGGFLGAFVAERLGLRRR
LMRWSRAAEFTCDRAAMLVSQDVNVVVSTLLKLAGGSVSQASELSVPEFL
KQASAYDLASQTRIGRLLKREQSMVRSR*
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mRNA from alignment at H-canaliculatus_M_contigs8863:38..4560+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs8863.1.1 ID=mRNA_H-canaliculatus_M_contigs8863.1.1|Name=mRNA_H-canaliculatus_M_contigs8863.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=4523bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8863:38..4560+ (Hapterophycus canaliculatus Oshoro7m male)
GGGAGTGGGGGGAGGGATCCGGAGCGGAAGGAGGGGCAAGGGACGGAAGG GGTTGAGACGGCCAAGGCGACGGCGACGGCGGCGGCGGCGGCGGCGACCA GGAAGCGCTTCAACGGACTCCTGGCGGATCGGTTCCAGCATCCGTTCGAC CTGGTAGGACGCATGGCGTGTGACGTGTGACGTGTGTGCCGCTCCTGTTT CGCTTCGGTTCTTTGATTTGCCAAATCTTGTTGCCGTCGCTCTCCAAAGG AAGACGAAGGCGTCGGCAAGACGGAAGGGACGTCCCCTTGAGACCAGAGT CGTGAAGATCGTGTCGAGTTCGCCGCCTCGTTCTATGGAGAAAAGCCGCT TCGCGCCGAAGACGGAATACCCTTCCCCGGGGGACACCCGTGGAAGAGCT CGCAGGCCTTCGCGGCGAGTCCGGCCGGGACAAGAGGGGTTGTGAAAAAA AGGCGCATAAGAAAAGGTTGTGAATGCGAGTAAATAAATCGGCAGATCTC CGGTGGAAGCCAGCAGCAACCATGCGGAGGGGCGCATCCTCCCCCCCTCC GTTTTGCCGTGCACAAGCAGATGGAGCGTCGAGTCCCTCTTCCTCCGAAA TGACCGCGTGGTAGTGCCGTGTGGAAGATCGCTGGCGAATTTTTTGGGGG GGGATCTCCTGTCCCCTTTCAGTCTTGTATGAGGCAGCAAAGTCCTTCTG AAGAAGGAACATGTGTCAGCAGTGCTTACGCGATAGCGCGAGCTCCGATG TTCAACAGATGTTCAATATTTGGTCCTTTGGGAAAAACGTTTTTGAAGCA ATTTGGTGCAAGGAAGATGCTATTCTGGGCGGTTGGGAAGGCAGCACCAG TGTACGAGGCACACGCCTCGTGTTGTTTTGCAACACGCACGTCTCTTTTT TTTCCATTCTTTTTGTGATTCTGGCCGTGCGGAAGGCGTGACGCCGGAGG AGGTGTTGGCGGGGTCGCGAATGATCTGCGCCCCAACGGTTCCTTCGTGC GCGCAAGAGACGACGAGTTGACTGGCGACACCCCGGGCGCAACGAGGCGT TTGCGTTCTCGCCGGCCAGACCGATGGTCTTCGTTGCATCAAGGAGATCG AGATCAAGATCATGATTGAGAATTATTCTACGCTTTTCGAGGCGCGCGAA CGATGCGCGCGTCCTGCATACTGGCACTCTTTCTCACGGCGATAACCTCG GGGTTGTTCGAGCCTATCTGTCCATGCTCGTGGCATCCATCACTTCGTAC ACATTTTCTCGTGTTTTTTGCACTGACCGAACGATCGAGGGCAATCGACC AACTAAAACCCATCAGACCCCGCTCGAGAAGTACCTACGGTAGCGCATTT TTCACCTCCTGGTATTTCCTTTTTGCACCAGGTGTTCCATTCAAGCTCCA CCTCCCCCCCCCCCTTCCGCCGTGAGCCAACACACACGCCAACTCGAAAC CCCACGGTGCTTTTCCGGCCAAACCCAGGAGGCGACCGGGATGCTGCGAA GGCTCCCTGGGTTGGAGCTGGCGATCCGCGGAGCGGTTCCGGCGATCGAG GACGCCGTCTTCATGGACAACATCGCCAACTCCATCCTCGTGGGGCCGCG GCAGATGGGCTCGCTCCACGGACTCCTGCTTGAGGCCTGCCGCATCCTCG ATATGGAGGCGCCCGACTTGTACATCAGACAGGTCGGCGTGATACCGGCG TTGATGTTGTTGCTGTTGCTGTTGTTGTTGTTGTTGTTGTTGTTGTTGGG AGTGGTGTTGGTGTTGCGTTTTAAGGTGTTTAGACTCAACTGCTGTGTTC GTTTGGTGGAGGTTTGACGGTTTCGTTTTTCGCTGTGTTTTTGTGTTTTT GTTCGTGGTCTGCTTTTGTTCTGAGGATCGTGCACTGTTCTGGCACACGA ATCATTCTTTGACGTTTTGCGTCCCGCGTTTTGTTGCCAAGCGATACGGT AGGTGAGGGAAGTGGTGTTGATATTGTTGATACTCGGCGGCTGGTGCTGC TGGTTCTGTCCGGTGCTGGTGCCTCCTGGCGCTATTTGCGTTGGTAAGTG TTGCAGTTGGTAGTGGAATGCAGGTGCCCCCTTGTGCCTTATGGAGCGTA CAGTAAGTGATCAAAGCGTGCATGCCACAGTGCAGCACCCAGAAGCTGAA AGGCTTATCGCTATCCGACGCGCCTACCTACTCTGCTCGATTCCCCCCCA CATTTGACGTTTCATTTCTTCCCGCCGCCCGCCCCCCCGGTTTCGTAATC TAGCTGGTATTCGCAAGAGGCGTCTGCGGCATCTCCCTGGTCCGAAATAC GCTTCCCCGACACGATTGTCGTGCCTCCTAACGACCGTCTTCTGTCGGCC AGACAGCAGGACAATGGGACAGCAGCAGCATTTCGTGAACCCTTTCTTAT TTCCGTTCAGTCTATCAGCGCCAGATTCCCCATGCCGTGCACCCTGCGCG TTGCTTGTCTCCTCTTCCCCTCTCGGGTGTGTGTTGTTTTGTTTCTTGTT TTTGTTGTTTTCTTGTGAGAAATACATGTACTCCGGGCATGTTTTTTCTG TTTCTGTTTCTGTTTCTTTCTTGTTTCGCGCTGACTTGAAGGCGTGGTCC TTCTGCTCGTTCCTTCTTGTTTCTGAAACGTCGATGTGGTGTGCGCAGAA CCCGACTCCGAACGCGTACACGCTGGCCATCCGAGGGAAGAAGCCCTTCA TCGTGCTGCACACCTCCCTGGTGGACCTCATGGAGCCCGAGGTGCGCTCT GTCCCCCCCCCCCTCCAAAACACAAGAAGAGCGAAAACGTGTCTGAAAAC CAACCAAGAACGAAGACGCCGAGTTGTCGGCATCGAAATAACAATCTAAA AAAAAAGAGTCGTTTTTTGCTGTCCTCGGCTGCGGCTGGGGGAAGCGGTG GTGTTCGGCATCCCGCGGGCCGTCTTGCCGCGAGGCGTGGAGGGCGGGGC GTGTGGAAGAACGACGCGGAGACTAACAGAAAAAAATCCGCAGATCGTCC CCGCCCTTGCCTGCGGCCGATCCTGTCGCCGGGAAAGCGTTGCCGCGAGT ACCGGCTGGTAGCTGTTGCTTCTTCGCTGGACGGGCGATGGCGCCGCTCG CGCTGTCCCCGACTCCCGGCGGCCTCCCCGCGGCTTCCGCCCGTCGCGCC GAGTTGCGCCCGCGCCCACGCCCGCGCCCACGCTCGGGGGGTCCGAGGGG CGCGCAGGATCGGGGCGAACACGATGGAGGGCAGCGACTCCCGCGAGGGG AGGGAAGGGTTGGTTTGCCTCGACGGTCGTCCTGCGCCGTCCCTTCCGCC GTGCGATCGATCTGGCGATCGGTGAACCCCTCTCCGTGTGGCCGACGCGC TCTTCGCGCGAACCGGGAGGATCTGCGGTGCTTGCTGTCCACCCGAGGGC ACCCCCGGGAACACGCCCTTCCCTTCGTGTTTCCGTGATCGCCGCGGGGG GGTCGCGGGCGACCTGGGGCAAGCGCCAGGCCCCTCCGCGTGCGCGCTGC CCTCGCCCGGATCGTTCTGCCTTGTGTGCACACGACGCACAGACAGCCGT CCTCGCCTCAAGCGTTTTTTCTTCTTCCATCCGCCCAAAAAAAACGCCTC TTTTACCCCTGCCGAACCCCTCTCCAGGAAGTGCAAGCGGTCATCGCGCA CGAGCTGGGGCACCTCAAATGCGAGCACGGGATTTGGGTCACCCTCGCCA CCGTCTTGGCGAACGGCCTCTACAGGGGCGGCTTCCTCGGCGCTTTCGTG GCCGAGAGGCTGGGCCTGAGGCGGCGCCTGATGCGGTGGTCCAGGGCCGC CGAGTTCACGTGCGACCGGGCCGCCATGCTCGTCTCGCAGGACGTGAACG TGGTGGTCTCTACGCTGCTGAAGCTCGCGGGGGGCAGCGTGAGCCAGGTG TGGAAGATTGTTGTTCTTGTTCTAGTTCTTGTTATTCTTGTTGCTGCTGC TGCCGTTGCTGCTGTTGGTGTTGCTGCTGCTGCTCCCGTTGTTGTTGTTG TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGGTGTTGTTGTTGTTACTGTT GTTGCTGTTGTTGTTGCTGTTGTTGTTTTTGTTATTGGTGTTGGTGTTGT TACTGTTGTTGTTGGTGTTGTTATTGTTGATGTTGTTGTTGTTGTTGTTG CTGTTGTTGTTGTTGTTGTTGTTGTTGTTGATGGTGTTGTTGTTGTTGTT GTTGCCGTTGTTGTTGTTGCCGTTGTTGCTGTTGTTGTTACTGCTGATGT CGTCGGTGTTGCTCATGTTTCTTCTCCTGCGGTTTCCGCCCTCTGGTCGT CGTCGTATATTGCTGTCGTTACCTGTATCGGTGTCCACCCTTTCTCGCTG CCCGCACCGTCTGCCGCCCTCACTCTCCACCCTCGCTGCGCGGAATTCGA CGACAGGCGTCCGAGTTGAGCGTACCCGAGTTCCTGAAGCAGGCCTCGGC CTACGACCTCGCCAGCCAGACAAGGATAGGAAGGCTTCTGAAAAGAGAGC AATCCATGGTAAGGAGCCGGTAG
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs8863:38..4560+

>mRNA_H-canaliculatus_M_contigs8863.1.1 ID=mRNA_H-canaliculatus_M_contigs8863.1.1|Name=mRNA_H-canaliculatus_M_contigs8863.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=837bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8863:38..4560+ (Hapterophycus canaliculatus Oshoro7m male)
GGGAGTGGGGGGAGGGATCCGGAGCGGAAGGAGGGGCAAGGGACGGAAGG
GGTTGAGACGGCCAAGGCGACGGCGACGGCGGCGGCGGCGGCGGCGACCA
GGAAGCGCTTCAACGGACTCCTGGCGGATCGGTTCCAGCATCCGTTCGAC
CTGGAGGCGACCGGGATGCTGCGAAGGCTCCCTGGGTTGGAGCTGGCGAT
CCGCGGAGCGGTTCCGGCGATCGAGGACGCCGTCTTCATGGACAACATCG
CCAACTCCATCCTCGTGGGGCCGCGGCAGATGGGCTCGCTCCACGGACTC
CTGCTTGAGGCCTGCCGCATCCTCGATATGGAGGCGCCCGACTTGTACAT
CAGACAGAACCCGACTCCGAACGCGTACACGCTGGCCATCCGAGGGAAGA
AGCCCTTCATCGTGCTGCACACCTCCCTGGTGGACCTCATGGAGCCCGAG
GAAGTGCAAGCGGTCATCGCGCACGAGCTGGGGCACCTCAAATGCGAGCA
CGGGATTTGGGTCACCCTCGCCACCGTCTTGGCGAACGGCCTCTACAGGG
GCGGCTTCCTCGGCGCTTTCGTGGCCGAGAGGCTGGGCCTGAGGCGGCGC
CTGATGCGGTGGTCCAGGGCCGCCGAGTTCACGTGCGACCGGGCCGCCAT
GCTCGTCTCGCAGGACGTGAACGTGGTGGTCTCTACGCTGCTGAAGCTCG
CGGGGGGCAGCGTGAGCCAGGCGTCCGAGTTGAGCGTACCCGAGTTCCTG
AAGCAGGCCTCGGCCTACGACCTCGCCAGCCAGACAAGGATAGGAAGGCT
TCTGAAAAGAGAGCAATCCATGGTAAGGAGCCGGTAG
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