mRNA_H-canaliculatus_M_contigs8799.2.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs8799.2.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIX3_9PHAE) HSP 1 Score: 99.8 bits (247), Expect = 2.770e-23 Identity = 50/53 (94.34%), Postives = 51/53 (96.23%), Query Frame = 1
Query: 22 KPVAAMRNLYTAAMSYNGYTITDGALRLIVLLHAADLGFNAIEIAFMFSAYEV 180
K VA MRNLYTAAMSYNGYT+TDGALRLIVLLHAADLGFNAIEIAFMFSAYEV
Sbjct: 63 KQVAPMRNLYTAAMSYNGYTVTDGALRLIVLLHAADLGFNAIEIAFMFSAYEV 115
BLAST of mRNA_H-canaliculatus_M_contigs8799.2.1 vs.
Match: Putative (membrane transporter (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPK8_ECTSI) HSP 1 Score: 98.6 bits (244), Expect = 8.790e-23 Identity = 49/53 (92.45%), Postives = 51/53 (96.23%), Query Frame = 1
Query: 22 KPVAAMRNLYTAAMSYNGYTITDGALRLIVLLHAADLGFNAIEIAFMFSAYEV 180
K VA MRNLYTAA+SYNGYT+TDGALRLIVLLHAADLGFNAIEIAFMFSAYEV
Sbjct: 66 KQVAPMRNLYTAALSYNGYTVTDGALRLIVLLHAADLGFNAIEIAFMFSAYEV 118
BLAST of mRNA_H-canaliculatus_M_contigs8799.2.1 vs.
Match: Putative (membrane transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH56_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 1.710e-14 Identity = 37/53 (69.81%), Postives = 43/53 (81.13%), Query Frame = 1
Query: 22 KPVAAMRNLYTAAMSYNGYTITDGALRLIVLLHAADLGFNAIEIAFMFSAYEV 180
K A +RNLY AMSYN +T TDGALRL+VLLHA +LGF+AI+IA MFS YEV
Sbjct: 31 KEPAPIRNLYITAMSYNAFTFTDGALRLVVLLHADELGFDAIQIAIMFSLYEV 83
BLAST of mRNA_H-canaliculatus_M_contigs8799.2.1 vs.
Match: Putative (membrane transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEU1_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 1.620e-11 Identity = 32/49 (65.31%), Postives = 40/49 (81.63%), Query Frame = 1
Query: 31 AAMRNLYTAAMSYNGYTITDGALRLIVLLHAADLGFNAIEIAFMFSAYE 177
A +RNLY + SY G+T+TDGALRL+VLL+A LGF+AI+IA MFS YE
Sbjct: 39 APVRNLYVTSTSYVGFTLTDGALRLVVLLYADSLGFDAIQIAIMFSLYE 87
BLAST of mRNA_H-canaliculatus_M_contigs8799.2.1 vs.
Match: Uncharacterized (protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GYA8_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 7.870e-11 Identity = 30/48 (62.50%), Postives = 39/48 (81.25%), Query Frame = 1
Query: 37 MRNLYTAAMSYNGYTITDGALRLIVLLHAADLGFNAIEIAFMFSAYEV 180
+RNLY S+N +TITDGA+RL+VLLHAA LGF+ I+IA MF+ YE+
Sbjct: 99 IRNLYVTVYSFNLFTITDGAIRLVVLLHAAALGFSPIQIAIMFTLYEL 146
BLAST of mRNA_H-canaliculatus_M_contigs8799.2.1 vs.
Match: Hypothetical (protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WN85_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 1.600e-8 Identity = 28/51 (54.90%), Postives = 35/51 (68.63%), Query Frame = 1
Query: 28 VAAMRNLYTAAMSYNGYTITDGALRLIVLLHAADLGFNAIEIAFMFSAYEV 180
V MRN Y S+N +T+TDGA+R+IVLLHA L F I IA MF+ YE+
Sbjct: 73 VLPMRNFYATVYSFNMFTVTDGAIRVIVLLHANALNFTPIAIALMFTLYEL 123
BLAST of mRNA_H-canaliculatus_M_contigs8799.2.1 vs.
Match: Permease (of the major facilitator superfamily n=3 Tax=Geminocystis TaxID=669357 RepID=A0A0D6AIF3_9CHRO) HSP 1 Score: 58.2 bits (139), Expect = 2.160e-8 Identity = 28/48 (58.33%), Postives = 34/48 (70.83%), Query Frame = 1
Query: 37 MRNLYTAAMSYNGYTITDGALRLIVLLHAADLGFNAIEIAFMFSAYEV 180
+RN +Y GYTITDGALR++VLLH LGF IEIAF+F YE+
Sbjct: 5 LRNYALVTSAYWGYTITDGALRMLVLLHFNKLGFTPIEIAFLFLFYEI 52
BLAST of mRNA_H-canaliculatus_M_contigs8799.2.1 vs.
Match: Major (facilitator superfamily MFS_1 n=4 Tax=Cyanobacterium TaxID=102234 RepID=K9YKV9_CYASC) HSP 1 Score: 57.4 bits (137), Expect = 4.040e-8 Identity = 27/48 (56.25%), Postives = 34/48 (70.83%), Query Frame = 1
Query: 37 MRNLYTAAMSYNGYTITDGALRLIVLLHAADLGFNAIEIAFMFSAYEV 180
++N +Y GYTITDGALR++VLLH LGF IEIAF+F YE+
Sbjct: 5 LKNYCLVTAAYWGYTITDGALRMLVLLHFNQLGFTPIEIAFLFLFYEI 52
BLAST of mRNA_H-canaliculatus_M_contigs8799.2.1 vs.
Match: Major (facilitator transporter n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2X352_CAPO3) HSP 1 Score: 57.4 bits (137), Expect = 4.070e-8 Identity = 27/52 (51.92%), Postives = 38/52 (73.08%), Query Frame = 1
Query: 25 PVAAMRNLYTAAMSYNGYTITDGALRLIVLLHAADLGFNAIEIAFMFSAYEV 180
P ++R Y ++SY +T+TDGALR+IVL+ A D+GF+A EIA MF YE+
Sbjct: 30 PSPSLRPFYVISLSYLLFTLTDGALRMIVLMQANDIGFSAFEIALMFVLYEL 81
BLAST of mRNA_H-canaliculatus_M_contigs8799.2.1 vs.
Match: MFS (transporter n=1 Tax=Desulfuromonas sp. TaxID=892 RepID=A0A2J6J2Z3_9DELT) HSP 1 Score: 57.0 bits (136), Expect = 5.530e-8 Identity = 25/47 (53.19%), Postives = 36/47 (76.60%), Query Frame = 1
Query: 37 MRNLYTAAMSYNGYTITDGALRLIVLLHAADLGFNAIEIAFMFSAYE 177
++N +Y G+T+TDGALR++VLLH DLGF+A++IAF+F YE
Sbjct: 4 IKNYSLVTTAYWGFTLTDGALRMLVLLHFHDLGFSAVQIAFLFLLYE 50 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8799.2.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs8799.2.1 >prot_H-canaliculatus_M_contigs8799.2.1 ID=prot_H-canaliculatus_M_contigs8799.2.1|Name=mRNA_H-canaliculatus_M_contigs8799.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=60bp PAKSSTPKPVAAMRNLYTAAMSYNGYTITDGALRLIVLLHAADLGFNAIEback to top mRNA from alignment at H-canaliculatus_M_contigs8799:4482..4827+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs8799.2.1 ID=mRNA_H-canaliculatus_M_contigs8799.2.1|Name=mRNA_H-canaliculatus_M_contigs8799.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=346bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8799:4482..4827+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs8799:4482..4827+ >mRNA_H-canaliculatus_M_contigs8799.2.1 ID=mRNA_H-canaliculatus_M_contigs8799.2.1|Name=mRNA_H-canaliculatus_M_contigs8799.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=180bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8799:4482..4827+ (Hapterophycus canaliculatus Oshoro7m male)back to top |