mRNA_H-canaliculatus_M_contigs8768.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs8768.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KX44_9PHAE) HSP 1 Score: 209 bits (531), Expect = 1.530e-64 Identity = 99/138 (71.74%), Postives = 116/138 (84.06%), Query Frame = 1
Query: 1 KHSEEENRALNLGVNASFLAAVVVMAIVVVFGVDSDVSRGWTAGEVIRRVPLDNWEGYSSSLRDNPVLVKACTSGIVYTMGDWVAQTVEGTDLSEIKRGRVLRSALAGLLLHGPLSHVWYDVCEWLFDIVDWNDYWWV 414
K+ EEEN+ LNL NA FLA V + I VVFGV+S+VSRGWT GE I RVPLDNW+GYS LR +PV VKACTSGIVY +GD VAQ++EGT+L+EI+R RV+RSA+AGLLLHGPLSHVWY+VCE LFDIV WN+YWWV
Sbjct: 103 KNREEENKKLNLFANAGFLAGVALFTIAVVFGVNSEVSRGWTIGEYILRVPLDNWDGYSEMLRQSPVQVKACTSGIVYALGDLVAQSMEGTELAEIERQRVVRSAMAGLLLHGPLSHVWYNVCEGLFDIVGWNEYWWV 240
BLAST of mRNA_H-canaliculatus_M_contigs8768.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8Z2_9STRA) HSP 1 Score: 161 bits (407), Expect = 3.600e-46 Identity = 78/138 (56.52%), Postives = 93/138 (67.39%), Query Frame = 1
Query: 1 KHSEEENRALNLGVNASFLAAVVVMAIVVVFGVDSDVSRGWTAGEVIRRVPLDNWEGYSSSLRDNPVLVKACTSGIVYTMGDWVAQTVEGTDLSEIKRGRVLRSALAGLLLHGPLSHVWYDVCEWLFDIVDWNDYWWV 414
K EE+R +N VN+ FL AV+V V + D SRGWTA EV+ R+P DNW+GY LR +PVLVKA TSG VY +GDW AQT GT L+E+ R RV RSA AG + HGPLSH WY+VCE LF + WN WWV
Sbjct: 50 KSEMEEDREVNFLVNSGFLIAVIVTVAVRLASSTLDASRGWTAEEVLLRLPQDNWQGYMDMLRSHPVLVKAVTSGTVYALGDWTAQTTNGTPLAELDRWRVARSAAAGFVGHGPLSHCWYEVCEALFSAIGWNGAWWV 187
BLAST of mRNA_H-canaliculatus_M_contigs8768.1.1 vs.
Match: Predicted (protein (Fragment) n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G9T7_PHATC) HSP 1 Score: 129 bits (323), Expect = 1.400e-34 Identity = 56/124 (45.16%), Postives = 85/124 (68.55%), Query Frame = 1
Query: 40 VNASFLAAVVVMAIVVVFGVDSDVSRGWTAGEVIRRVPLDNWEGYSSSLRDNPVLVKACTSGIVYTMGDWVAQTVEGTDLSEIKRGRVLRSALAGLLLHGPLSHVWYDVCEWLFD-IVDWNDYW 408
+N F+ VV + + + +D+ +SRGWT+ E+ R+P+D W GYS L ++PV KA TS VYT+GD++AQ +G + ++ RGR++RS LAGL+ HGPLSH WY+VC+ FD ++ W +W
Sbjct: 2 INTGFIVGVVGVLLYEITTMDATISRGWTSEELAARIPMDVWAGYSQVLENSPVATKAATSATVYTIGDFIAQRTQGAAMGDLDRGRIVRSMLAGLIGHGPLSHFWYNVCDHFFDNVLHWTAWW 125
BLAST of mRNA_H-canaliculatus_M_contigs8768.1.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N9P3_9STRA) HSP 1 Score: 129 bits (324), Expect = 5.760e-34 Identity = 60/128 (46.88%), Postives = 86/128 (67.19%), Query Frame = 1
Query: 28 LNLGVNASFLAAVVVMAIVVVFGVDSDVSRGWTAGEVIRRVPLDNWEGYSSSLRDNPVLVKACTSGIVYTMGDWVAQTVEGTDLSEIKRGRVLRSALAGLLLHGPLSHVWYDVCEWLF-DIVDWNDYW 408
+N VN + AV + + + VD+ + RGWTA E+ R+P+DNW YS+ L ++PV KA TS VYT+GD +AQ EG + E+ R R++RS LAGL+ HGPLSH+WYD E LF D+++W ++W
Sbjct: 147 INSIVNTGIVLAVTIAVLSKLATVDAGLMRGWTAAEMAARIPVDNWNSYSAVLENSPVSTKAFTSATVYTIGDIIAQRTEGATIGELDRPRIVRSLLAGLIGHGPLSHIWYDKSETLFSDVLEWTEWW 274
BLAST of mRNA_H-canaliculatus_M_contigs8768.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HYH1_9STRA) HSP 1 Score: 127 bits (320), Expect = 5.050e-33 Identity = 60/128 (46.88%), Postives = 84/128 (65.62%), Query Frame = 1
Query: 28 LNLGVNASFLAAVVVMAIVVVFGVDSDVSRGWTAGEVIRRVPLDNWEGYSSSLRDNPVLVKACTSGIVYTMGDWVAQTVEGTDLSEIKRGRVLRSALAGLLLHGPLSHVWYDVCEWLFD-IVDWNDYW 408
+N +N + + AV+V + V VD+ ++RGWT EV R+P+DNW YS+ L D P+ KA TS VYT+GD +AQ EG + ++ R R+LRS LAGL+ HGPLSH WYD E FD ++ W ++W
Sbjct: 98 INSFINTAVVIAVLVALLSKVASVDAGLTRGWTPEEVAARIPMDNWSSYSAVLEDAPISTKAITSASVYTIGDVIAQRTEGNSMGDLDRPRILRSLLAGLIGHGPLSHFWYDYSEAFFDDVLKWTEWW 225
BLAST of mRNA_H-canaliculatus_M_contigs8768.1.1 vs.
Match: Hypothetical (protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KHW9_9STRA) HSP 1 Score: 127 bits (318), Expect = 1.230e-32 Identity = 63/142 (44.37%), Postives = 86/142 (60.56%), Query Frame = 1
Query: 7 SEEENRALNLG-------VNASFLAAVVVMAIVVVFGVDSDVSRGWTAGEVIRRVPLDNWEGYSSSLRDNPVLVKACTSGIVYTMGDWVAQTVEGTDLSEIKRGRVLRSALAGLLLHGPLSHVWYDVCEWLFDIVDWNDYWW 411
S EE++++ L +N S + + V VD ++RGWTA E+ R+PLDNW Y++ L P+ KA TS VYT+GD +AQ EG D+ ++ RGR+LRSALAGL+ HGP+SHVWY V E FD + WW
Sbjct: 105 SAEESQSIQLRSVDKDALINTSIFIIAIATVVTTVLSVDVGITRGWTAEEIALRIPLDNWRSYTNILSMAPIETKAVTSATVYTIGDIIAQKTEGLDIGKLDRGRILRSALAGLIGHGPMSHVWYHVSEDFFDNILHLHAWW 246
BLAST of mRNA_H-canaliculatus_M_contigs8768.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VV68_9STRA) HSP 1 Score: 126 bits (316), Expect = 2.330e-32 Identity = 61/127 (48.03%), Postives = 78/127 (61.42%), Query Frame = 1
Query: 28 LNLGVNASFLAAVVVMAIVVVFGVDSDVSRGWTAGEVIRRVPLDNWEGYSSSLRDNPVLVKACTSGIVYTMGDWVAQTVEGTDLSEIKRGRVLRSALAGLLLHGPLSHVWYDVCEWLFDIVDWNDYW 408
+N +N + V + + V VD D+ RGWTA E + R+ LDNW YS L P+ KA TS VY +GD +AQ EG + E+ R R LRS LAGL+ HGPLSHVWYDV E LF + WN++W
Sbjct: 106 INETINTGLIVLVALGVLARVGTVDQDMMRGWTAAESLTRISLDNWADYSEILNAAPLQTKAITSATVYAIGDIIAQRTEGVSMGELDRPRTLRSLLAGLIGHGPLSHVWYDVSEELFTALHWNEWW 232
BLAST of mRNA_H-canaliculatus_M_contigs8768.1.1 vs.
Match: Uncharacterized (protein n=10 Tax=Citrus TaxID=2706 RepID=V4ULS9_CITCL) HSP 1 Score: 125 bits (313), Expect = 3.470e-32 Identity = 59/130 (45.38%), Postives = 78/130 (60.00%), Query Frame = 1
Query: 7 SEEENRALNLGVNASFLAAVVVMAIVVVFGVDSDVSRGWTAGEVIRRVPLDNWEGYSSSLRDNPVLVKACTSGIVYTMGDWVAQTVEGTDLSEIKRGRVLRSALAGLLLHGPLSHVWYDVCEWLFDIVDW 396
+EE R ++ +NA+ + AV AI + +D D GWT E++R PL NW Y ++L+ NPVL K SG+VY++GDW+AQ EG L E R R+ RS L G LHG LSH +Y CE LF DW
Sbjct: 121 NEEMGRLIDRTINATIVLAVGTFAITKLLTIDQDYWHGWTIFEIVRYAPLHNWTAYEAALKTNPVLAKMVISGVVYSLGDWIAQCFEGKPLFEFDRTRMFRSGLVGFTLHGSLSHYYYQFCEELFPFQDW 250
BLAST of mRNA_H-canaliculatus_M_contigs8768.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Citrus sinensis TaxID=2711 RepID=A0A067G3I6_CITSI) HSP 1 Score: 123 bits (309), Expect = 3.630e-32 Identity = 58/130 (44.62%), Postives = 77/130 (59.23%), Query Frame = 1
Query: 7 SEEENRALNLGVNASFLAAVVVMAIVVVFGVDSDVSRGWTAGEVIRRVPLDNWEGYSSSLRDNPVLVKACTSGIVYTMGDWVAQTVEGTDLSEIKRGRVLRSALAGLLLHGPLSHVWYDVCEWLFDIVDW 396
+EE R ++ +NA+ + AV AI + +D D GWT E++R PL NW Y +L+ NPVL K SG+VY++GDW+AQ +G L E R R+ RS L G LHG LSH +Y CE LF DW
Sbjct: 10 NEEMERLIDRTINATIVLAVGTFAITKLLTIDQDYWHGWTIFEIVRYAPLHNWTAYEEALKTNPVLAKMVISGVVYSLGDWIAQCFQGKPLFEFDRTRMFRSGLVGFTLHGSLSHYYYQFCEELFPFQDW 139
BLAST of mRNA_H-canaliculatus_M_contigs8768.1.1 vs.
Match: protein (SYM1 isoform X1 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=UPI0009F6167A) HSP 1 Score: 122 bits (307), Expect = 6.420e-32 Identity = 56/129 (43.41%), Postives = 77/129 (59.69%), Query Frame = 1
Query: 10 EEENRALNLGVNASFLAAVVVMAIVVVFGVDSDVSRGWTAGEVIRRVPLDNWEGYSSSLRDNPVLVKACTSGIVYTMGDWVAQTVEGTDLSEIKRGRVLRSALAGLLLHGPLSHVWYDVCEWLFDIVDW 396
EE+++ ++ +NAS + A AI + +D D GWT E++R P NW Y +L+ NPVL K SG+VY++GDW+AQ G L E R R+ RS L G LHG LSH +Y+ CE+LF DW
Sbjct: 4 EEQDKMVDRAINASIVLAAGTFAITKLLTIDMDYWHGWTIYEIVRYAPQHNWTAYEEALKTNPVLAKMMISGVVYSIGDWIAQCYAGKPLFEFDRARMFRSGLTGFALHGSLSHYYYEFCEFLFPFQDW 132 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8768.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs8768.1.1 >prot_H-canaliculatus_M_contigs8768.1.1 ID=prot_H-canaliculatus_M_contigs8768.1.1|Name=mRNA_H-canaliculatus_M_contigs8768.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=140bp KHSEEENRALNLGVNASFLAAVVVMAIVVVFGVDSDVSRGWTAGEVIRRVback to top mRNA from alignment at H-canaliculatus_M_contigs8768:168..1410- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs8768.1.1 ID=mRNA_H-canaliculatus_M_contigs8768.1.1|Name=mRNA_H-canaliculatus_M_contigs8768.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=1243bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8768:168..1410- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs8768:168..1410- >mRNA_H-canaliculatus_M_contigs8768.1.1 ID=mRNA_H-canaliculatus_M_contigs8768.1.1|Name=mRNA_H-canaliculatus_M_contigs8768.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=420bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8768:168..1410- (Hapterophycus canaliculatus Oshoro7m male)back to top |