mRNA_H-canaliculatus_M_contigs8765.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs8765.1.1 vs.
Match: Reverse (transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU92_9PHAE) HSP 1 Score: 119 bits (298), Expect = 1.150e-29 Identity = 54/72 (75.00%), Postives = 61/72 (84.72%), Query Frame = 1
Query: 1 LNQVDHVIFCTGLRPRLRFLPEELLRLLEFDENDLLQPLVLHLQTWNPRVPGLGFVGVYRGPYFGSMELQAR 216
+ +VDH+IFCTGLRP L FLP ++LR LE D+ DLLQPL+LHLQ WNP VP LGFVGVYRGPYFG MELQAR
Sbjct: 793 VEKVDHMIFCTGLRPSLGFLPGDVLRQLEHDKGDLLQPLILHLQAWNPSVPDLGFVGVYRGPYFGVMELQAR 864
BLAST of mRNA_H-canaliculatus_M_contigs8765.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZL8_ECTSI) HSP 1 Score: 116 bits (290), Expect = 1.220e-28 Identity = 53/72 (73.61%), Postives = 59/72 (81.94%), Query Frame = 1
Query: 1 LNQVDHVIFCTGLRPRLRFLPEELLRLLEFDENDLLQPLVLHLQTWNPRVPGLGFVGVYRGPYFGSMELQAR 216
+ +VDHVI CTGLRP L FLP ++L LE D+ DLLQPL+LHLQ WNP VP LGFVGVYRGPYFG MELQAR
Sbjct: 368 VEKVDHVILCTGLRPSLEFLPGDVLGQLEHDKGDLLQPLILHLQAWNPSVPDLGFVGVYRGPYFGVMELQAR 439
BLAST of mRNA_H-canaliculatus_M_contigs8765.1.1 vs.
Match: Flavin-containing (monooxygenase n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GDG8_GONPE) HSP 1 Score: 85.1 bits (209), Expect = 1.230e-17 Identity = 38/72 (52.78%), Postives = 50/72 (69.44%), Query Frame = 1
Query: 1 LNQVDHVIFCTGLRPRLRFLPEELLRLLEFDENDLLQPLVLHLQTWNPRVPGLGFVGVYRGPYFGSMELQAR 216
L+ VD ++ CTG RPR+ FLP ++L L + +D PL LH +P VPGL FVG++RGPYFG+ ELQAR
Sbjct: 322 LDGVDAIVLCTGFRPRMDFLPADVLATLSYTPDDRYVPLALHRGVLHPDVPGLAFVGMFRGPYFGTAELQAR 393
BLAST of mRNA_H-canaliculatus_M_contigs8765.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1A8L0_NOCSC) HSP 1 Score: 82.8 bits (203), Expect = 4.520e-17 Identity = 40/68 (58.82%), Postives = 48/68 (70.59%), Query Frame = 1
Query: 13 DHVIFCTGLRPRLRFLPEELLRLLEFDENDLLQPLVLHLQTWNPRVPGLGFVGVYRGPYFGSMELQAR 216
D VI TG P L F+ E LL+ +EFD NDLLQP +LH W P +P L FVG+YRGPYF ++ELQAR
Sbjct: 183 DVVISATGYLPSLHFIGE-LLKSVEFDPNDLLQPTILHECVWRPELPALAFVGMYRGPYFAAIELQAR 249
BLAST of mRNA_H-canaliculatus_M_contigs8765.1.1 vs.
Match: Flavin-containing (monooxygenase n=3 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4CA54_9CHLO) HSP 1 Score: 83.2 bits (204), Expect = 5.870e-17 Identity = 38/72 (52.78%), Postives = 49/72 (68.06%), Query Frame = 1
Query: 1 LNQVDHVIFCTGLRPRLRFLPEELLRLLEFDENDLLQPLVLHLQTWNPRVPGLGFVGVYRGPYFGSMELQAR 216
L+ VD ++ CTGLRP L+FLP+ELL L + D PL LH + +P PGL FVGV+R P+F +ELQAR
Sbjct: 498 LHDVDAIVLCTGLRPALKFLPDELLSKLSYTPYDNYVPLALHRRVLHPDAPGLAFVGVFRSPFFAVVELQAR 569
BLAST of mRNA_H-canaliculatus_M_contigs8765.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=uncultured Alphaproteobacteria bacterium TaxID=91750 RepID=A0A212JHN2_9PROT) HSP 1 Score: 82.8 bits (203), Expect = 7.510e-17 Identity = 38/71 (53.52%), Postives = 49/71 (69.01%), Query Frame = 1
Query: 4 NQVDHVIFCTGLRPRLRFLPEELLRLLEFDENDLLQPLVLHLQTWNPRVPGLGFVGVYRGPYFGSMELQAR 216
+ +D V+ CTG L FL E+L +EFD D LQP++LH Q ++P +PGL FVG YRGPYF MELQ+R
Sbjct: 313 DDLDAVVMCTGYSSALPFLSPEILAAVEFDPRDQLQPVLLHHQVFHPDLPGLAFVGYYRGPYFPVMELQSR 383
BLAST of mRNA_H-canaliculatus_M_contigs8765.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HS26_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 1.050e-16 Identity = 37/71 (52.11%), Postives = 47/71 (66.20%), Query Frame = 1
Query: 1 LNQVDHVIFCTGLRPRLRFLPEELLRLLEFDENDLLQPLVLHLQTWNPRVPGLGFVGVYRGPYFGSMELQA 213
L VD +I CTG P L FL + +L + FDE + LQPL+LH +P +PGL F G+YRGPYF +ELQA
Sbjct: 161 LENVDDLILCTGFTPALDFLDQSILATIGFDEKETLQPLLLHRDVMHPDLPGLYFAGMYRGPYFAGVELQA 231
BLAST of mRNA_H-canaliculatus_M_contigs8765.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZT13_TRICV) HSP 1 Score: 77.0 bits (188), Expect = 1.840e-16 Identity = 36/72 (50.00%), Postives = 46/72 (63.89%), Query Frame = 1
Query: 1 LNQVDHVIFCTGLRPRLRFLPEELLRLLEFDENDLLQPLVLHLQTWNPRVPGLGFVGVYRGPYFGSMELQAR 216
+ +D VI CTG R L FL +L L++D D PL L ++P +P LGFVG+YRGPYFG MELQ+R
Sbjct: 23 VTDIDRVIACTGYRSDLTFLSPSILETLKYDAADPFAPLTLCHDFYHPELPNLGFVGMYRGPYFGVMELQSR 94
BLAST of mRNA_H-canaliculatus_M_contigs8765.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Frankia sp. Ea1.12 TaxID=573499 RepID=A0A2X3KK38_9ACTN) HSP 1 Score: 81.6 bits (200), Expect = 1.950e-16 Identity = 37/68 (54.41%), Postives = 48/68 (70.59%), Query Frame = 1
Query: 13 DHVIFCTGLRPRLRFLPEELLRLLEFDENDLLQPLVLHLQTWNPRVPGLGFVGVYRGPYFGSMELQAR 216
D VI+CTG RP L FLP + R +E+D D+ QP++L + +PGL FVG+YRGPYFG +ELQAR
Sbjct: 318 DAVIWCTGYRPDLTFLPRTVSRAVEYDPTDIFQPVLLADAVFPQEIPGLSFVGMYRGPYFGVVELQAR 385
BLAST of mRNA_H-canaliculatus_M_contigs8765.1.1 vs.
Match: Pyr_redox_2 (domain-containing protein n=1 Tax=Talaromyces amestolkiae TaxID=1196081 RepID=A0A364KPS8_9EURO) HSP 1 Score: 80.9 bits (198), Expect = 3.780e-16 Identity = 40/75 (53.33%), Postives = 54/75 (72.00%), Query Frame = 1
Query: 1 LNQVDHVIFCTGLRP--RLRFLPEELLRLLEFDENDLLQPLVLHLQ-TWNPRVPGLGFVGVYRGPYFGSMELQAR 216
L+ V ++F TG P L FLPEE+L+ LE+ END + P+VL + NP++P LGFVG+YRGPY+G ME+QAR
Sbjct: 372 LDNVAAIVFATGFTPFDSLSFLPEEILQFLEYTENDTVFPIVLDEKGVRNPKIPDLGFVGMYRGPYWGVMEMQAR 446 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8765.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs8765.1.1 >prot_H-canaliculatus_M_contigs8765.1.1 ID=prot_H-canaliculatus_M_contigs8765.1.1|Name=mRNA_H-canaliculatus_M_contigs8765.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=73bp LNQVDHVIFCTGLRPRLRFLPEELLRLLEFDENDLLQPLVLHLQTWNPRVback to top mRNA from alignment at H-canaliculatus_M_contigs8765:866..1084+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs8765.1.1 ID=mRNA_H-canaliculatus_M_contigs8765.1.1|Name=mRNA_H-canaliculatus_M_contigs8765.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=219bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8765:866..1084+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs8765:866..1084+ >mRNA_H-canaliculatus_M_contigs8765.1.1 ID=mRNA_H-canaliculatus_M_contigs8765.1.1|Name=mRNA_H-canaliculatus_M_contigs8765.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=219bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8765:866..1084+ (Hapterophycus canaliculatus Oshoro7m male)back to top |