mRNA_H-canaliculatus_M_contigs8765.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs8765.1.1
Unique NamemRNA_H-canaliculatus_M_contigs8765.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs8765.1.1 vs.
Match: Reverse (transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU92_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 1.150e-29
Identity = 54/72 (75.00%), Postives = 61/72 (84.72%), Query Frame = 1
Query:    1 LNQVDHVIFCTGLRPRLRFLPEELLRLLEFDENDLLQPLVLHLQTWNPRVPGLGFVGVYRGPYFGSMELQAR 216
            + +VDH+IFCTGLRP L FLP ++LR LE D+ DLLQPL+LHLQ WNP VP LGFVGVYRGPYFG MELQAR
Sbjct:  793 VEKVDHMIFCTGLRPSLGFLPGDVLRQLEHDKGDLLQPLILHLQAWNPSVPDLGFVGVYRGPYFGVMELQAR 864          
BLAST of mRNA_H-canaliculatus_M_contigs8765.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZL8_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 1.220e-28
Identity = 53/72 (73.61%), Postives = 59/72 (81.94%), Query Frame = 1
Query:    1 LNQVDHVIFCTGLRPRLRFLPEELLRLLEFDENDLLQPLVLHLQTWNPRVPGLGFVGVYRGPYFGSMELQAR 216
            + +VDHVI CTGLRP L FLP ++L  LE D+ DLLQPL+LHLQ WNP VP LGFVGVYRGPYFG MELQAR
Sbjct:  368 VEKVDHVILCTGLRPSLEFLPGDVLGQLEHDKGDLLQPLILHLQAWNPSVPDLGFVGVYRGPYFGVMELQAR 439          
BLAST of mRNA_H-canaliculatus_M_contigs8765.1.1 vs.
Match: Flavin-containing (monooxygenase n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GDG8_GONPE)

HSP 1 Score: 85.1 bits (209), Expect = 1.230e-17
Identity = 38/72 (52.78%), Postives = 50/72 (69.44%), Query Frame = 1
Query:    1 LNQVDHVIFCTGLRPRLRFLPEELLRLLEFDENDLLQPLVLHLQTWNPRVPGLGFVGVYRGPYFGSMELQAR 216
            L+ VD ++ CTG RPR+ FLP ++L  L +  +D   PL LH    +P VPGL FVG++RGPYFG+ ELQAR
Sbjct:  322 LDGVDAIVLCTGFRPRMDFLPADVLATLSYTPDDRYVPLALHRGVLHPDVPGLAFVGMFRGPYFGTAELQAR 393          
BLAST of mRNA_H-canaliculatus_M_contigs8765.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1A8L0_NOCSC)

HSP 1 Score: 82.8 bits (203), Expect = 4.520e-17
Identity = 40/68 (58.82%), Postives = 48/68 (70.59%), Query Frame = 1
Query:   13 DHVIFCTGLRPRLRFLPEELLRLLEFDENDLLQPLVLHLQTWNPRVPGLGFVGVYRGPYFGSMELQAR 216
            D VI  TG  P L F+ E LL+ +EFD NDLLQP +LH   W P +P L FVG+YRGPYF ++ELQAR
Sbjct:  183 DVVISATGYLPSLHFIGE-LLKSVEFDPNDLLQPTILHECVWRPELPALAFVGMYRGPYFAAIELQAR 249          
BLAST of mRNA_H-canaliculatus_M_contigs8765.1.1 vs.
Match: Flavin-containing (monooxygenase n=3 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4CA54_9CHLO)

HSP 1 Score: 83.2 bits (204), Expect = 5.870e-17
Identity = 38/72 (52.78%), Postives = 49/72 (68.06%), Query Frame = 1
Query:    1 LNQVDHVIFCTGLRPRLRFLPEELLRLLEFDENDLLQPLVLHLQTWNPRVPGLGFVGVYRGPYFGSMELQAR 216
            L+ VD ++ CTGLRP L+FLP+ELL  L +   D   PL LH +  +P  PGL FVGV+R P+F  +ELQAR
Sbjct:  498 LHDVDAIVLCTGLRPALKFLPDELLSKLSYTPYDNYVPLALHRRVLHPDAPGLAFVGVFRSPFFAVVELQAR 569          
BLAST of mRNA_H-canaliculatus_M_contigs8765.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=uncultured Alphaproteobacteria bacterium TaxID=91750 RepID=A0A212JHN2_9PROT)

HSP 1 Score: 82.8 bits (203), Expect = 7.510e-17
Identity = 38/71 (53.52%), Postives = 49/71 (69.01%), Query Frame = 1
Query:    4 NQVDHVIFCTGLRPRLRFLPEELLRLLEFDENDLLQPLVLHLQTWNPRVPGLGFVGVYRGPYFGSMELQAR 216
            + +D V+ CTG    L FL  E+L  +EFD  D LQP++LH Q ++P +PGL FVG YRGPYF  MELQ+R
Sbjct:  313 DDLDAVVMCTGYSSALPFLSPEILAAVEFDPRDQLQPVLLHHQVFHPDLPGLAFVGYYRGPYFPVMELQSR 383          
BLAST of mRNA_H-canaliculatus_M_contigs8765.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HS26_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 1.050e-16
Identity = 37/71 (52.11%), Postives = 47/71 (66.20%), Query Frame = 1
Query:    1 LNQVDHVIFCTGLRPRLRFLPEELLRLLEFDENDLLQPLVLHLQTWNPRVPGLGFVGVYRGPYFGSMELQA 213
            L  VD +I CTG  P L FL + +L  + FDE + LQPL+LH    +P +PGL F G+YRGPYF  +ELQA
Sbjct:  161 LENVDDLILCTGFTPALDFLDQSILATIGFDEKETLQPLLLHRDVMHPDLPGLYFAGMYRGPYFAGVELQA 231          
BLAST of mRNA_H-canaliculatus_M_contigs8765.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZT13_TRICV)

HSP 1 Score: 77.0 bits (188), Expect = 1.840e-16
Identity = 36/72 (50.00%), Postives = 46/72 (63.89%), Query Frame = 1
Query:    1 LNQVDHVIFCTGLRPRLRFLPEELLRLLEFDENDLLQPLVLHLQTWNPRVPGLGFVGVYRGPYFGSMELQAR 216
            +  +D VI CTG R  L FL   +L  L++D  D   PL L    ++P +P LGFVG+YRGPYFG MELQ+R
Sbjct:   23 VTDIDRVIACTGYRSDLTFLSPSILETLKYDAADPFAPLTLCHDFYHPELPNLGFVGMYRGPYFGVMELQSR 94          
BLAST of mRNA_H-canaliculatus_M_contigs8765.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Frankia sp. Ea1.12 TaxID=573499 RepID=A0A2X3KK38_9ACTN)

HSP 1 Score: 81.6 bits (200), Expect = 1.950e-16
Identity = 37/68 (54.41%), Postives = 48/68 (70.59%), Query Frame = 1
Query:   13 DHVIFCTGLRPRLRFLPEELLRLLEFDENDLLQPLVLHLQTWNPRVPGLGFVGVYRGPYFGSMELQAR 216
            D VI+CTG RP L FLP  + R +E+D  D+ QP++L    +   +PGL FVG+YRGPYFG +ELQAR
Sbjct:  318 DAVIWCTGYRPDLTFLPRTVSRAVEYDPTDIFQPVLLADAVFPQEIPGLSFVGMYRGPYFGVVELQAR 385          
BLAST of mRNA_H-canaliculatus_M_contigs8765.1.1 vs.
Match: Pyr_redox_2 (domain-containing protein n=1 Tax=Talaromyces amestolkiae TaxID=1196081 RepID=A0A364KPS8_9EURO)

HSP 1 Score: 80.9 bits (198), Expect = 3.780e-16
Identity = 40/75 (53.33%), Postives = 54/75 (72.00%), Query Frame = 1
Query:    1 LNQVDHVIFCTGLRP--RLRFLPEELLRLLEFDENDLLQPLVLHLQ-TWNPRVPGLGFVGVYRGPYFGSMELQAR 216
            L+ V  ++F TG  P   L FLPEE+L+ LE+ END + P+VL  +   NP++P LGFVG+YRGPY+G ME+QAR
Sbjct:  372 LDNVAAIVFATGFTPFDSLSFLPEEILQFLEYTENDTVFPIVLDEKGVRNPKIPDLGFVGMYRGPYWGVMEMQAR 446          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8765.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Reverse1.150e-2975.00transcriptase domain-containing protein n=1 Tax=Ec... [more]
Uncharacterized1.220e-2873.61protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Flavin-containing1.230e-1752.78monooxygenase n=1 Tax=Gonium pectorale TaxID=33097... [more]
Hypothetical4.520e-1758.82protein n=1 Tax=Noctiluca scintillans TaxID=2966 R... [more]
Flavin-containing5.870e-1752.78monooxygenase n=3 Tax=Volvox reticuliferus TaxID=1... [more]
Uncharacterized7.510e-1753.52protein n=1 Tax=uncultured Alphaproteobacteria bac... [more]
Hypothetical1.050e-1652.11protein n=1 Tax=Spumella elongata TaxID=89044 RepI... [more]
Hypothetical1.840e-1650.00protein (Fragment) n=1 Tax=Trieres chinensis TaxID... [more]
Uncharacterized1.950e-1654.41protein n=1 Tax=Frankia sp. Ea1.12 TaxID=573499 Re... [more]
Pyr_redox_23.780e-1653.33domain-containing protein n=1 Tax=Talaromyces ames... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs8765contigH-canaliculatus_M_contigs8765:866..1084 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FZL8
PFAMsFMO-like
Model size219
Max annot lvl2759|Eukaryota
KEGG koko:K14003
KEGG Pathwayko04141,map04141
Hectar predicted targeting categoryother localisation
Exons1
Evalue2e-29
EggNOG OGsCOG2072@1|root,KOG1399@2759|Eukaryota
DescriptionN,N-dimethylaniline monooxygenase activity
Cds size219
COG categoryP
BRITEko00000,ko00001,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854172.61435-CDS-H-canaliculatus_M_contigs8765:865..10841696854172.61435-CDS-H-canaliculatus_M_contigs8765:865..1084Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8765 866..1084 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs8765.1.1prot_H-canaliculatus_M_contigs8765.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs8765 866..1084 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs8765.1.1

>prot_H-canaliculatus_M_contigs8765.1.1 ID=prot_H-canaliculatus_M_contigs8765.1.1|Name=mRNA_H-canaliculatus_M_contigs8765.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=73bp
LNQVDHVIFCTGLRPRLRFLPEELLRLLEFDENDLLQPLVLHLQTWNPRV
PGLGFVGVYRGPYFGSMELQAR*
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mRNA from alignment at H-canaliculatus_M_contigs8765:866..1084+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs8765.1.1 ID=mRNA_H-canaliculatus_M_contigs8765.1.1|Name=mRNA_H-canaliculatus_M_contigs8765.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=219bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8765:866..1084+ (Hapterophycus canaliculatus Oshoro7m male)
TTGAATCAGGTGGATCACGTCATTTTTTGCACGGGGCTGCGGCCACGTCT CCGCTTCCTGCCGGAAGAGCTACTGCGCTTGCTCGAGTTCGACGAGAATG ATCTCCTCCAGCCGCTTGTACTTCACCTGCAGACGTGGAATCCTCGCGTT CCTGGCCTGGGTTTTGTCGGGGTGTACAGAGGGCCGTACTTCGGCTCAAT GGAGCTCCAGGCACGGTGA
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs8765:866..1084+

>mRNA_H-canaliculatus_M_contigs8765.1.1 ID=mRNA_H-canaliculatus_M_contigs8765.1.1|Name=mRNA_H-canaliculatus_M_contigs8765.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=219bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8765:866..1084+ (Hapterophycus canaliculatus Oshoro7m male)
TTGAATCAGGTGGATCACGTCATTTTTTGCACGGGGCTGCGGCCACGTCT
CCGCTTCCTGCCGGAAGAGCTACTGCGCTTGCTCGAGTTCGACGAGAATG
ATCTCCTCCAGCCGCTTGTACTTCACCTGCAGACGTGGAATCCTCGCGTT
CCTGGCCTGGGTTTTGTCGGGGTGTACAGAGGGCCGTACTTCGGCTCAAT
GGAGCTCCAGGCACGGTGA
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