mRNA_H-canaliculatus_M_contigs8551.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs8551.1.1 vs.
Match: 3-hydroxy-3-methylglutaryl (coenzyme A reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX65_9STRA) HSP 1 Score: 325 bits (832), Expect = 7.010e-106 Identity = 164/204 (80.39%), Postives = 188/204 (92.16%), Query Frame = 1
Query: 22 LPQAFPEMELVAISGNMCTDKKSAAINWVEGRGKSIVCEARIPGQHVESTLKTTVKAMXXXXXXKNLVGSAMAGALGGFNAHAANIVTAVFLATGQDPAQNVESSSCITLMEQMDNGDLLVSVNMPSIEVGTVGGGTSLPAQAACLEVIGCRGATQAPGRPGENAQQMAKVVAAATLAGELSLVAALASNQLVRAHMQHNRKPQ 633
L +AFPE+EL+AISGNMCTDKK AAINW+EGRGKS+VCEARIPG++VESTLKTTV+A+ KNL+GSA+AGALGGFNAHA+N+VTAVFLATGQDPAQNVE+S C+TLME+ D+GDLLVSVNMP IEVGTVGGGTSLPAQAACL+VIGCRGA+QAP PG NA+Q+A+V+AAA LAGELSL+AALASNQLVRAHMQHNRK Q
Sbjct: 361 LTEAFPELELIAISGNMCTDKKPAAINWIEGRGKSVVCEARIPGRYVESTLKTTVRAIVETNVQKNLIGSALAGALGGFNAHASNVVTAVFLATGQDPAQNVEASMCMTLMEETDDGDLLVSVNMPCIEVGTVGGGTSLPAQAACLDVIGCRGASQAPDAPGANARQLAQVIAAAVLAGELSLMAALASNQLVRAHMQHNRKKQ 564
BLAST of mRNA_H-canaliculatus_M_contigs8551.1.1 vs.
Match: Hydroxymethylglutaryl-CoA (reductase (NADPH) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHX7_9PHAE) HSP 1 Score: 291 bits (746), Expect = 1.390e-95 Identity = 153/185 (82.70%), Postives = 162/185 (87.57%), Query Frame = 1
Query: 22 LPQAFPEMELVAISGNMCTDKKSAAINWVEGRGKSIVCEARIPGQHVESTLKTTVKA---------------MXXXXXXKNLVGSAMAGALGGFNAHAANIVTAVFLATGQDPAQNVESSSCITLMEQMDNGDLLVSVNMPSIEVGTVGGGTSLPAQAACLEVIGCRGATQAPGRPGENAQQMAK 531
L + FPEMELVAISGNMCTDKKSAAINWVEGRGKSIVCEARIPG+HVE+TLKTTVKA M KNLVGSAMAGALGGFNAHA+NIVTAVFLATGQDPAQNVESS+CITLME+MDNGDLLVSVNMPSIEVGTVGGGTSLPAQAACL+++GCRGATQAPGRPGENAQQMAK
Sbjct: 172 LQEEFPEMELVAISGNMCTDKKSAAINWVEGRGKSIVCEARIPGKHVEATLKTTVKARAKGTTNSIELLFSAMVETNIQKNLVGSAMAGALGGFNAHASNIVTAVFLATGQDPAQNVESSTCITLMEEMDNGDLLVSVNMPSIEVGTVGGGTSLPAQAACLDIVGCRGATQAPGRPGENAQQMAK 356
BLAST of mRNA_H-canaliculatus_M_contigs8551.1.1 vs.
Match: Hydroxymethylglutaryl-CoA (reductase (NADPH) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FDJ4_9STRA) HSP 1 Score: 276 bits (706), Expect = 1.890e-91 Identity = 145/206 (70.39%), Postives = 169/206 (82.04%), Query Frame = 1
Query: 13 LRALPQAFPEMELVAISGNMCTDKKSAAINWVEGRGKSIVCEARIPGQHVESTLKTTVKAMXXXXXXKNLVGSAMAGALGGFNAHAANIVTAVFLATGQDPAQNVESSSCITLMEQMDNGDLLVSVNMPSIEVGTVGGGTSLPAQAACLEVIGCRGATQAPGRPGENAQQMAKVVAAATLAGELSLVAALASNQLVRAHMQHNRKP 630
+ L + FP +ELVA+SGN CTDKK+AA NW+ GRGKS+V EA IP V+ TLKTTVKA+ KNL+GSAMAGA+GGFNAHA+NIVTA+FLATGQDPAQNVESS+CITLME+ D+ DL + MPSIEVGTVGGGTSLPAQAACLE IGCRG PG +NA+++A VVAAATLAGELSL+AALA+N LV+AHM HNRKP
Sbjct: 14 IETLQKEFPSLELVALSGNFCTDKKAAATNWLMGRGKSVVVEAIIPKDVVQKTLKTTVKALVHTNINKNLIGSAMAGAIGGFNAHASNIVTAIFLATGQDPAQNVESSNCITLMEETDDEDLWICCTMPSIEVGTVGGGTSLPAQAACLEAIGCRGGASTPG---DNARKLATVVAAATLAGELSLLAALAANTLVQAHMVHNRKP 216
BLAST of mRNA_H-canaliculatus_M_contigs8551.1.1 vs.
Match: 3-hydroxy-3-methylglutaryl (coenzyme A reductase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GE13_PHATC) HSP 1 Score: 276 bits (705), Expect = 3.160e-89 Identity = 146/206 (70.87%), Postives = 171/206 (83.01%), Query Frame = 1
Query: 13 LRALPQAFPEMELVAISGNMCTDKKSAAINWVEGRGKSIVCEARIPGQHVESTLKTTVKAMXXXXXXKNLVGSAMAGALGGFNAHAANIVTAVFLATGQDPAQNVESSSCITLMEQMDNGDLLVSVNMPSIEVGTVGGGTSLPAQAACLEVIGCRGATQAPGRPGENAQQMAKVVAAATLAGELSLVAALASNQLVRAHMQHNRKP 630
+ L Q FPE+ LVA+SGNMCTDKK+AA NW+EGRGKSIV EA IP V +TLKTTV +M KNL+GSAMAGALGGFNAHA+NIVTAVFLATGQDPAQNVESS+CITL+E+ + GDL +S MPSIEVGTVGGGTSLPAQAACL+ +G RG PG +AQ++A++VA+ATLAGELSL+AALA+N LV+AHMQHNRKP
Sbjct: 162 IETLQQEFPELVLVALSGNMCTDKKAAATNWLEGRGKSIVVEATIPKDVVTNTLKTTVHSMVQTNLHKNLIGSAMAGALGGFNAHASNIVTAVFLATGQDPAQNVESSNCITLLEETEEGDLWISCTMPSIEVGTVGGGTSLPAQAACLQAMGVRGGGATPGA---HAQKLAQIVASATLAGELSLLAALAANTLVQAHMQHNRKP 364
BLAST of mRNA_H-canaliculatus_M_contigs8551.1.1 vs.
Match: 3-hydroxy-3-methylglutaryl (coenzyme A reductase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I1A6_9STRA) HSP 1 Score: 276 bits (706), Expect = 2.000e-87 Identity = 144/203 (70.94%), Postives = 169/203 (83.25%), Query Frame = 1
Query: 22 LPQAFPEMELVAISGNMCTDKKSAAINWVEGRGKSIVCEARIPGQHVESTLKTTVKAMXXXXXXKNLVGSAMAGALGGFNAHAANIVTAVFLATGQDPAQNVESSSCITLMEQMDNGDLLVSVNMPSIEVGTVGGGTSLPAQAACLEVIGCRGATQAPGRPGENAQQMAKVVAAATLAGELSLVAALASNQLVRAHMQHNRKP 630
L Q FP+++LVA+SGNMCTDKK+AA NW+ GRGKS+V EA IP V STLKTTV+A+ KNLVGSAMAGA+GGFNAHAAN VTAVFLATGQDPAQNVESS+CITL+E+ + GDL + MPSIEVGTVGGGT LPAQAACL+ IGC+G +PG +NA+Q+A VVAAAT+AGELSL+AALA+N LV+AHM HNRKP
Sbjct: 318 LKQVFPDLDLVALSGNMCTDKKAAATNWIHGRGKSVVIEATIPNHIVRSTLKTTVQAIVQTNINKNLVGSAMAGAIGGFNAHAANNVTAVFLATGQDPAQNVESSNCITLLEETEQGDLWICCTMPSIEVGTVGGGTGLPAQAACLKAIGCKGGGASPG---DNAKQLAHVVAAATMAGELSLLAALAANTLVQAHMTHNRKP 517
BLAST of mRNA_H-canaliculatus_M_contigs8551.1.1 vs.
Match: 3-hydroxy-3-methylglutaryl (coenzyme A reductase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FDH1_9STRA) HSP 1 Score: 273 bits (697), Expect = 1.070e-86 Identity = 142/213 (66.67%), Postives = 176/213 (82.63%), Query Frame = 1
Query: 22 LPQAFPEMELVAISGNMCTDKKSAAINWVEGRGKSIVCEARIPGQHVESTLKTTVKAMXXXXXXKNLVGSAMAGALGGFNAHAANIVTAVFLATGQDPAQNVESSSCITLMEQMDNG-----DLLVSVNMPSIEVGTVGGGTSLPAQAACLEVIGCRGATQAPGRPGENAQQMAKVVAAATLAGELSLVAALASNQLVRAHMQHNRKPQPAAS 645
L + FPEM L++ISGN C DKK AA+NW+EGRGKS+V EA IP V+ TLKT+V A+ KNLVGSAMAG++GG NAHAANIV AVFLATGQDPAQ +ESS+CITL+E +D+ DL +S +MPSIEVGTVGGGTSLPAQA CL+++G RGA++AP PG+NAQ++ ++VAAA +AGELSL++ALA+N+LV+AHMQHNRKPQPAAS
Sbjct: 241 LYEQFPEMRLISISGNYCADKKPAAVNWIEGRGKSVVVEAVIPSAVVKKTLKTSVPALVDVAMRKNLVGSAMAGSVGGNNAHAANIVAAVFLATGQDPAQVIESSNCITLLEAIDSDGEGGPDLHISCSMPSIEVGTVGGGTSLPAQAQCLDIMGVRGASRAPKNPGDNAQKLGRMVAAAVMAGELSLLSALAANELVKAHMQHNRKPQPAAS 453
BLAST of mRNA_H-canaliculatus_M_contigs8551.1.1 vs.
Match: 3-hydroxy-3-methylglutaryl (coenzyme A reductase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ALR6_9STRA) HSP 1 Score: 277 bits (708), Expect = 1.540e-86 Identity = 146/208 (70.19%), Postives = 168/208 (80.77%), Query Frame = 1
Query: 13 LRALPQAFPEMELVAISGNMCTDKKSAAINWVEGRGKSIVCEARIPGQHVESTLKTTVKAMXXXXXXKNLVGSAMAGALGGFNAHAANIVTAVFLATGQDPAQNVESSSCITLMEQMDNGDLLVSVNMPSIEVGTVGGGTSLPAQAACLEVIGCRGATQAPGRPGENAQQMAKVVAAATLAGELSLVAALASNQLVRAHMQHNRKPQP 636
+ L FP +LVA+SGNMCTDKK+AA NW+ GRGKS+V E IP + V +TLKTTV A+ KNL+GSAMAGA+GGFNAHA+NIVTAVFLATGQDPAQNVESS+CITLME+ DNGDL + MPSIEVGTVGGGTSLPAQAACLE IGC+G PG NAQ++A VVAAAT+AGELSL+AALA+N LV+AHM HNRKP P
Sbjct: 428 IETLQDKFPSCKLVALSGNMCTDKKAAATNWLLGRGKSVVVECVIPKEVVRTTLKTTVAALVHTNINKNLIGSAMAGAIGGFNAHASNIVTAVFLATGQDPAQNVESSNCITLMEEQDNGDLWICCTMPSIEVGTVGGGTSLPAQAACLEAIGCKGGGSTPGA---NAQKLATVVAAATMAGELSLLAALAANTLVQAHMVHNRKPAP 632
BLAST of mRNA_H-canaliculatus_M_contigs8551.1.1 vs.
Match: 3-hydroxy-3-methylglutaryl (coenzyme A reductase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0R4_THAPS) HSP 1 Score: 266 bits (680), Expect = 1.970e-85 Identity = 141/206 (68.45%), Postives = 164/206 (79.61%), Query Frame = 1
Query: 13 LRALPQAFPEMELVAISGNMCTDKKSAAINWVEGRGKSIVCEARIPGQHVESTLKTTVKAMXXXXXXKNLVGSAMAGALGGFNAHAANIVTAVFLATGQDPAQNVESSSCITLMEQMDNGDLLVSVNMPSIEVGTVGGGTSLPAQAACLEVIGCRGATQAPGRPGENAQQMAKVVAAATLAGELSLVAALASNQLVRAHMQHNRKP 630
+ L + FP++ LVA+SGNMCTDKK+AA+NW+EGRGKS+V EA IP V STLKT+V A+ KNL+GSAMAG +GGFNAHAAN VTAVFLATGQDPAQNVESS+CITLME GDL +S MPSIEVGTVGGGT L AQ+ACL IG +G + PG+NA+Q+A VVA AT+AGELSL+AALASN LV AHMQHNRKP
Sbjct: 163 IECLREQFPQLSLVALSGNMCTDKKAAAMNWIEGRGKSVVIEATIPKDVVRSTLKTSVPAIVEANVNKNLIGSAMAGTVGGFNAHAANNVTAVFLATGQDPAQNVESSNCITLMEVSPEGDLWISCTMPSIEVGTVGGGTGLSAQSACLRAIGVKGGGE---NPGDNARQLAHVVACATMAGELSLMAALASNSLVAAHMQHNRKP 365
BLAST of mRNA_H-canaliculatus_M_contigs8551.1.1 vs.
Match: 3-hydroxy-3-methylglutaryl (coenzyme A reductase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JXU4_9STRA) HSP 1 Score: 271 bits (693), Expect = 3.940e-85 Identity = 143/207 (69.08%), Postives = 170/207 (82.13%), Query Frame = 1
Query: 22 LPQAFPEMELVAISGNMCTDKKSAAINWVEGRGKSIVCEARIPGQHVESTLKTTVKAMXXXXXXKNLVGSAMAGALGGFNAHAANIVTAVFLATGQDPAQNVESSSCITLMEQMDNGDLLVSVNMPSIEVGTVGGGTSLPAQAACLEVIGCRGATQAPGRPGENAQQMAKVVAAATLAGELSLVAALASNQLVRAHMQHNRKPQPAA 642
L Q FP ++LVA+SGNMCTDKK AAINW+EGRGKS+V EA IP V + LKTTVKA+ KNL+GSAM+G++GG+NAHA+NIVTAVFLATGQDPAQNVESS+CIT+ME+ D+GDL +S MPSIEVGTVGGGTSLPAQAACL+ IG +G PG NA+++A VVA AT+AGELSL+AALA+N LV+AHMQHNRKP A
Sbjct: 350 LRQHFPTLKLVALSGNMCTDKKPAAINWIEGRGKSVVVEATIPKDIVRTVLKTTVKAIVDTNLQKNLIGSAMSGSVGGYNAHASNIVTAVFLATGQDPAQNVESSNCITIMEETDDGDLWISCTMPSIEVGTVGGGTSLPAQAACLKAIGVKGGGDIPGG---NARKLAHVVAVATMAGELSLLAALAANTLVQAHMQHNRKPATPA 553
BLAST of mRNA_H-canaliculatus_M_contigs8551.1.1 vs.
Match: 3-hydroxy-3-methylglutaryl (coenzyme A reductase (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EB74_TRICV) HSP 1 Score: 269 bits (688), Expect = 2.310e-83 Identity = 141/204 (69.12%), Postives = 165/204 (80.88%), Query Frame = 1
Query: 13 LRALPQAFPEMELVAISGNMCTDKKSAAINWVEGRGKSIVCEARIPGQHVESTLKTTVKAMXXXXXXKNLVGSAMAGALGGFNAHAANIVTAVFLATGQDPAQNVESSSCITLMEQMDNGDLLVSVNMPSIEVGTVGGGTSLPAQAACLEVIGCRGATQAPGRPGENAQQMAKVVAAATLAGELSLVAALASNQLVRAHMQHNR 624
+ L FP +ELVA+SGNMCTDKK+AA NW+EGRGKS+V EA IP V +TLKTTV AM KNLVGSAMAGALGGFNAHAANIVTA+FLATGQDPAQNVESS+CITL+E+ GDL +S MPS+EVGTVGGGT LPAQA+CL IGC+G PG+NA+++A+VVAA+ LAGELSL+AALA+N LV+AHM HNR
Sbjct: 455 IELLRSTFPSLELVALSGNMCTDKKAAATNWIEGRGKSVVVEATIPKDVVRATLKTTVPAMVNTNLQKNLVGSAMAGALGGFNAHAANIVTAIFLATGQDPAQNVESSNCITLLEETPTGDLWISCTMPSVEVGTVGGGTGLPAQASCLRAIGCKGGGA---NPGDNARKLARVVAASVLAGELSLLAALAANTLVQAHMIHNR 655 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8551.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs8551.1.1 >prot_H-canaliculatus_M_contigs8551.1.1 ID=prot_H-canaliculatus_M_contigs8551.1.1|Name=mRNA_H-canaliculatus_M_contigs8551.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=217bp SRQSLRALPQAFPEMELVAISGNMCTDKKSAAINWVEGRGKSIVCEARIPback to top mRNA from alignment at H-canaliculatus_M_contigs8551:3151..4875- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs8551.1.1 ID=mRNA_H-canaliculatus_M_contigs8551.1.1|Name=mRNA_H-canaliculatus_M_contigs8551.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=1725bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8551:3151..4875- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs8551:3151..4875- >mRNA_H-canaliculatus_M_contigs8551.1.1 ID=mRNA_H-canaliculatus_M_contigs8551.1.1|Name=mRNA_H-canaliculatus_M_contigs8551.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=651bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8551:3151..4875- (Hapterophycus canaliculatus Oshoro7m male)back to top |