mRNA_H-canaliculatus_M_contigs853.2.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs853.2.1
Unique NamemRNA_H-canaliculatus_M_contigs853.2.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs853.2.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUW2_ECTSI)

HSP 1 Score: 331 bits (848), Expect = 1.010e-111
Identity = 170/210 (80.95%), Postives = 182/210 (86.67%), Query Frame = 1 
Query:    1 GLVFLAGLGSGVTEAVLVVTPAEVCKIRMQSQYIVLAAGEGATGGAGAGVGATAGTVKYRDVLQTAVVVAREEGVGALYKGLAPTVLRQGCNQAVNFTCYQTFKTRLSSYLGRDELSSWQHMLLGGISGGIGPCVNNPLDVVKTRLQKQVVIPGQAPKYGSFSSAIALIAKEEGIRALWKGLTPRLMRIMPGQAITFMTYEWVSKRLPAS 630
            GLVFLAGLGSGVTEA++VVTPAEVCKIRMQ+Q+  L   E                 KYR+VLQTAVVVAREEGVGALYKGLAPTVLRQGCNQAVNFTCYQ FKT+LS Y G +EL+SWQHMLLGG+SGGIGPCVNNPLDVVKTRLQKQVVIPGQAPKYG F SAI+LIAKEEG++ALWKGLTPRLMRIMPGQAITFMTYEWVSKRLPAS
Sbjct:  104 GLVFLAGLGSGVTEAIVVVTPAEVCKIRMQAQFHSLLDPE------------EMARRKYRNVLQTAVVVAREEGVGALYKGLAPTVLRQGCNQAVNFTCYQMFKTQLSLYTGSEELASWQHMLLGGLSGGIGPCVNNPLDVVKTRLQKQVVIPGQAPKYGGFVSAISLIAKEEGVKALWKGLTPRLMRIMPGQAITFMTYEWVSKRLPAS 301
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BLAST of mRNA_H-canaliculatus_M_contigs853.2.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI49_ECTSI)

HSP 1 Score: 326 bits (836), Expect = 4.330e-110
Identity = 168/214 (78.50%), Postives = 183/214 (85.51%), Query Frame = 1 
Query:    1 GLVFLAGLGSGVTEAVLVVTPAEVCKIRMQSQYIVLAAGEGATGGAGAGVGATAGTVKYRDVLQTAVVVAREEGVGALYKGLAPTVLRQGCNQAVNFTCYQTFKTRLSSYLGRDELSSWQHMLLGGISGGIGPCVNNPLDVVKTRLQKQVVIPGQAPKYGSFSSAIALIAKEEGIRALWKGLTPRLMRIMPGQAITFMTYEWVSKRLPASLDGG 642
            GLVFLAGLGSGVTEAV+VVTPAEVCKIRMQSQ + + A +G++G             KYRDVLQTA VV REEGV ALYKGLAPTVLRQGCNQAVNFTCYQ FKT+LS  LG +EL+ W HMLLGG+SGGIGPCVNNPLDV KTRLQ+QV+IPGQAPKYG F SAI+LIAKEEG++ALWKGLTPRLMRIMPGQAITFMTYEWVSKRLPASL  G
Sbjct:   91 GLVFLAGLGSGVTEAVMVVTPAEVCKIRMQSQSLQVIA-DGSSG-------------KYRDVLQTATVVVREEGVRALYKGLAPTVLRQGCNQAVNFTCYQVFKTKLSDLLGTEELAPWHHMLLGGLSGGIGPCVNNPLDVSKTRLQQQVLIPGQAPKYGGFVSAISLIAKEEGVKALWKGLTPRLMRIMPGQAITFMTYEWVSKRLPASLGTG 290
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BLAST of mRNA_H-canaliculatus_M_contigs853.2.1 vs.
Match: Hypothetical (protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1U9P6_HETAK)

HSP 1 Score: 276 bits (707), Expect = 3.920e-90
Identity = 143/207 (69.08%), Postives = 158/207 (76.33%), Query Frame = 1 
Query:    1 GLVFLAGLGSGVTEAVLVVTPAEVCKIRMQSQYIVLAAGEGATGGAGAGVGATAGTVKYRDVLQTAVVVAREEGVGALYKGLAPTVLRQGCNQAVNFTCYQTFKTRLSSYLGRDELSSWQHMLLGGISGGIGPCVNNPLDVVKTRLQKQVVIPGQAPKYGSFSSAIALIAKEEGIRALWKGLTPRLMRIMPGQAITFMTYEWVSKRL 621
            G V LAGLGSGVTEA+LVVTPAEVCKIRMQSQY  +               A   T KYR+VLQTAVV+ REEG GALYKG+ PT LRQGCNQAVNFTCYQ FK +     GR+EL+ WQHML+GG+SGG GP  NNPLDVVKTRLQKQ V PGQ PKY     A+ +IAKEEG+ ALWKGLTPRLMRIMPGQAITFMTYE+VSK +
Sbjct:  108 GKVLLAGLGSGVTEAILVVTPAEVCKIRMQSQYHSMMDP------------AAVATRKYRNVLQTAVVIVREEGPGALYKGVVPTTLRQGCNQAVNFTCYQIFKEQWLKRSGREELAPWQHMLIGGLSGGFGPAANNPLDVVKTRLQKQRVEPGQRPKYTGLGQAVVVIAKEEGVLALWKGLTPRLMRIMPGQAITFMTYEFVSKHV 302
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BLAST of mRNA_H-canaliculatus_M_contigs853.2.1 vs.
Match: Mitochondrial (carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM83_9STRA)

HSP 1 Score: 263 bits (671), Expect = 1.390e-84
Identity = 133/205 (64.88%), Postives = 159/205 (77.56%), Query Frame = 1 
Query:    7 VFLAGLGSGVTEAVLVVTPAEVCKIRMQSQYIVLAAGEGATGGAGAGVGATAGTVKYRDVLQTAVVVAREEGVGALYKGLAPTVLRQGCNQAVNFTCYQTFKTRLSSYLGRDELSSWQHMLLGGISGGIGPCVNNPLDVVKTRLQKQVVIPGQAPKYGSFSSAIALIAKEEGIRALWKGLTPRLMRIMPGQAITFMTYEWVSKRL 621
            VFLAGLGSGVTEAV+VVTPAEVCKIRMQ+QY  +   E                 KYR+V+QTA ++ +EEG+GALYKG+ PT LRQGCNQAVNF+ YQ FKT+  +     EL +WQHML+GG+SGG+GP VNNPLDVVKTRLQ+QVVIPG+ PKY      +A+IAKEEG+ ALWKGLTPRL+RIMPGQAITF TYE+VSK++
Sbjct:  116 VFLAGLGSGVTEAVMVVTPAEVCKIRMQAQYHSMLDPE------------QMARRKYRNVIQTAGLIVKEEGIGALYKGVVPTTLRQGCNQAVNFSFYQIFKTKWEAARDGKELIAWQHMLIGGLSGGMGPVVNNPLDVVKTRLQRQVVIPGEVPKYRGLGQGMAVIAKEEGVLALWKGLTPRLLRIMPGQAITFATYEFVSKKI 308
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BLAST of mRNA_H-canaliculatus_M_contigs853.2.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4GJ12_9STRA)

HSP 1 Score: 259 bits (661), Expect = 3.760e-83
Identity = 132/206 (64.08%), Postives = 157/206 (76.21%), Query Frame = 1 
Query:    7 VFLAGLGSGVTEAVLVVTPAEVCKIRMQSQYIVLAAGEGATGGAGAGVGATAGTVKYRDVLQTAVVVAREEGVGALYKGLAPTVLRQGCNQAVNFTCYQTFKTRLSS-YLGRDELSSWQHMLLGGISGGIGPCVNNPLDVVKTRLQKQVVIPGQAPKYGSFSSAIALIAKEEGIRALWKGLTPRLMRIMPGQAITFMTYEWVSKRL 621
            VFLAGLGSGVTEA+LVVTPAEVCKIRMQSQY  L                    VKYR+V QTA  + REEG+GALYKG+ PT+ RQGCNQAVNFT YQ+ K  +S+ +    EL+SWQH+LLGG+SGG+GP  NNPLDVVKTR+QKQV++PG+ PKY    S I +IA+EEG+ ALW+G+TPRLMRIMPGQAITFMTYE++ K L
Sbjct:  114 VFLAGLGSGVTEAILVVTPAEVCKIRMQSQYHSLK-----------DPALRFEEVKYRNVFQTAYTIVREEGLGALYKGVGPTIARQGCNQAVNFTAYQSMKDWVSANFRDGGELASWQHLLLGGLSGGMGPLANNPLDVVKTRMQKQVILPGETPKYAGMISGIGVIAREEGVGALWRGITPRLMRIMPGQAITFMTYEFMQKNL 308
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BLAST of mRNA_H-canaliculatus_M_contigs853.2.1 vs.
Match: Succinate (fumarate mitochondrial transporter n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0T5_9STRA)

HSP 1 Score: 251 bits (642), Expect = 5.220e-80
Identity = 134/215 (62.33%), Postives = 155/215 (72.09%), Query Frame = 1 
Query:   10 FLAGLGSGVTEAVLVVTPAEVCKIRMQSQYIVLAAGEGATGGAGAGVGATAGTVKYRDVLQTAVVVAREEGVGALYKGLAPTVLRQGCNQAVNFTCYQTFKTRLSSYLGRDELSSWQHMLLGGISGGIGPCVNNPLDVVKTRLQKQVVIPGQAPKYGSFSSAIALIAKEEGIRALWKGLTPRLMRIMPGQAITFMTYEWVSKRLPASLDGGAGLS 654
            FLAGLGSGVTEAVLVVTPAEVCKIR+Q+Q+  +A                    KYR+VLQTAVVVAREEG+GALYKG+ PTV+RQG NQAVNFT YQ  KT       R EL  W+ ML GG+SGG+GP VNNPLDVVKTRLQKQ ++ GQ PKY     AI +I  EEG+ ALWKG+TPRLMRIMPGQAITFMTYE+VS+ + +  D    L+
Sbjct:  130 FLAGLGSGVTEAVLVVTPAEVCKIRLQAQFHSMADP------------VQLANRKYRNVLQTAVVVAREEGIGALYKGVVPTVMRQGINQAVNFTTYQAVKTAWLERQQRKELLPWESMLFGGLSGGLGPLVNNPLDVVKTRLQKQRIVEGQLPKYRGIFQAIPVIVSEEGVLALWKGITPRLMRIMPGQAITFMTYEFVSRHMKSVEDAVGDLA 332
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BLAST of mRNA_H-canaliculatus_M_contigs853.2.1 vs.
Match: Hypothetical (protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T6Q3_9STRA)

HSP 1 Score: 248 bits (632), Expect = 5.360e-80
Identity = 127/204 (62.25%), Postives = 150/204 (73.53%), Query Frame = 1 
Query:   10 FLAGLGSGVTEAVLVVTPAEVCKIRMQSQYIVLAAGEGATGGAGAGVGATAGTVKYRDVLQTAVVVAREEGVGALYKGLAPTVLRQGCNQAVNFTCYQTFKTRLSSYLGRDELSSWQHMLLGGISGGIGPCVNNPLDVVKTRLQKQVVIPGQAPKYGSFSSAIALIAKEEGIRALWKGLTPRLMRIMPGQAITFMTYEWVSKRL 621
            F AGL SG+TEA+LVVTPAEVCKIRMQSQY  L   +                 KY +V+QTA  + REEG+GALYKG+ PT++RQGCNQAVNF+ Y  FK  +  Y GR EL SW+ ++LGG+SGG+GP VNNPLDVVKTRLQKQVV PG+  KY     + ALIAKEEG  ALWKG+TPRL+RIMPGQAITFMTYE VS ++
Sbjct:   34 FFAGLASGLTEAILVVTPAEVCKIRMQSQYHSLLDPQQMK------------HRKYTNVVQTATTIVREEGLGALYKGVVPTMMRQGCNQAVNFSVYNWFKKMVLEYRGRKELDSWESLILGGVSGGMGPLVNNPLDVVKTRLQKQVVAPGKPAKYTGLGQSCALIAKEEGYAALWKGITPRLLRIMPGQAITFMTYEAVSSKM 225
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BLAST of mRNA_H-canaliculatus_M_contigs853.2.1 vs.
Match: Hypothetical (protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HH19_9STRA)

HSP 1 Score: 249 bits (635), Expect = 4.390e-78
Identity = 129/204 (63.24%), Postives = 151/204 (74.02%), Query Frame = 1 
Query:   10 FLAGLGSGVTEAVLVVTPAEVCKIRMQSQYIVLAAGEGATGGAGAGVGATAGTVKYRDVLQTAVVVAREEGVGALYKGLAPTVLRQGCNQAVNFTCYQTFKTRLSSYLGRDELSSWQHMLLGGISGGIGPCVNNPLDVVKTRLQKQVVIPGQAPKYGSFSSAIALIAKEEGIRALWKGLTPRLMRIMPGQAITFMTYEWVSKRL 621
            FLAGL SG+TEAVLVVTPAEVCKIRMQSQY  L   +                 KY +V+QTAV + REEG+GALYKG+ PT++RQGCNQAVNF+ Y   K +L  Y G+ EL  W+ ++LGG+SGG+GP VNNPLDVVKTRLQKQVV PG+  KY     + ALIAKEEG  ALWKG+TPRL+RIMPGQAITFMTYE VS R+
Sbjct:  211 FLAGLASGLTEAVLVVTPAEVCKIRMQSQYHSLLDPQQMK------------HRKYTNVVQTAVTIVREEGIGALYKGVVPTMMRQGCNQAVNFSVYNAAKRKLLEYKGQGELEHWESLVLGGVSGGMGPLVNNPLDVVKTRLQKQVVTPGKPAKYTGLMQSCALIAKEEGYAALWKGITPRLLRIMPGQAITFMTYEAVSSRM 402
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BLAST of mRNA_H-canaliculatus_M_contigs853.2.1 vs.
Match: Predicted (protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GCT1_PHATC)

HSP 1 Score: 244 bits (623), Expect = 2.620e-77
Identity = 128/207 (61.84%), Postives = 154/207 (74.40%), Query Frame = 1 
Query:    4 LVFLAGLGSGVTEAVLVVTPAEVCKIRMQSQYIVLAAGEGATGGAGAGVGATAGTV-KYRDVLQTAVVVAREEGVGALYKGLAPTVLRQGCNQAVNFTCYQTFKTRLSSYLGRDELSSWQHMLLGGISGGIGPCVNNPLDVVKTRLQKQVVIPGQAPKYGSFSSAIALIAKEEGIRALWKGLTPRLMRIMPGQAITFMTYEWVSKRL 621
            + F AGL SG+TEAVLVVTPAEVCKIRMQSQY  +             +  TA    KY +VLQTA+++ +EEG GALYKG+ PT+LRQGCNQAVNFT Y   K ++  + G D L+SWQ +L+GG+SGG+GP VNNPLDVVKTRLQKQVV  G+  KY   + A  +IAKEEG+ ALWKG+TPRLMRIMPGQAITFMTYE VS ++
Sbjct:  126 ITFTAGLFSGLTEAVLVVTPAEVCKIRMQSQYHSM-------------MDPTAMQHRKYTNVLQTAMLIVKEEGAGALYKGVVPTMLRQGCNQAVNFTAYSAIKQQVMQWQGTDSLASWQSLLIGGLSGGMGPVVNNPLDVVKTRLQKQVVAAGKPAKYTGLAQACVVIAKEEGVLALWKGITPRLMRIMPGQAITFMTYEAVSAQM 319
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BLAST of mRNA_H-canaliculatus_M_contigs853.2.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RZG2_THAOC)

HSP 1 Score: 245 bits (626), Expect = 1.410e-75
Identity = 133/215 (61.86%), Postives = 154/215 (71.63%), Query Frame = 1 
Query:   10 FLAGLGSGVTEAVLVVTPAEVCKIRMQSQYIVLAAGEGATGGAGAGVGATAGTVKYRDVLQTAVVVAREEGVGALYKGLAPTVLRQGCNQAVNFTCYQTFKTRLSSY-------LGRD----ELSSWQHMLLGGISGGIGPCVNNPLDVVKTRLQKQVVIPGQAPKYGSFSSAIALIAKEEGIRALWKGLTPRLMRIMPGQAITFMTYEWVSKRL 621
            FLAGL SG+TEAV +VTPAEVCKIRMQSQY  L      T             VKYR+V QTAV+V REEG GALYKG+ PT+LRQGCNQAVNFT Y  FK +L +Y        GR      L  WQ ++LGGISGG+GP VNNPLDVVKTR+Q+QVV+PG+ PKY     +  +IA+EEG RALWKG+TPRLMRIMPGQAITFMTYE VS ++
Sbjct:  299 FLAGLASGLTEAVAIVTPAEVCKIRMQSQYHSLMDPSQMT------------HVKYRNVAQTAVLVVREEGPGALYKGVVPTMLRQGCNQAVNFTAYNLFKRQLLTYKRRRAEEAGRSGTDVSLDHWQSLVLGGISGGMGPLVNNPLDVVKTRMQRQVVVPGREPKYRGLVQSCVVIAREEGTRALWKGITPRLMRIMPGQAITFMTYEAVSGQI 501
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs853.2.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized1.010e-11180.95protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUW2... [more]
Uncharacterized4.330e-11078.50protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Hypothetical3.920e-9069.08protein n=2 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Mitochondrial1.390e-8464.88carrier domain-containing protein n=1 Tax=Tribonem... [more]
Hypothetical3.760e-8364.08protein n=1 Tax=Phaeomonas parva TaxID=124430 RepI... [more]
Succinate5.220e-8062.33fumarate mitochondrial transporter n=2 Tax=Monodop... [more]
Hypothetical5.360e-8062.25protein n=1 Tax=Ditylum brightwellii TaxID=49249 R... [more]
Hypothetical4.390e-7863.24protein n=1 Tax=Helicotheca tamesis TaxID=374047 R... [more]
Predicted2.620e-7761.84protein n=2 Tax=Phaeodactylum tricornutum TaxID=28... [more]
Uncharacterized1.410e-7561.86protein (Fragment) n=1 Tax=Thalassiosira oceanica ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs853contigH-canaliculatus_M_contigs853:8333..10518 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FUW2
Preferred nameSFC1
PFAMsMito_carr
Model size660
Max annot lvl2759|Eukaryota
KEGG koko:K07964,ko:K15100
KEGG TC2.A.29.7
KEGG ReactionR07811
KEGG Pathwayko00531,ko01100,ko05205,map00531,map01100,map05205
KEGG ModuleM00078
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0005215,GO:0005310,GO:0005342,GO:0005469,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006810,GO:0006811,GO:0006820,GO:0006835,GO:0006839,GO:0006855,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015138,GO:0015141,GO:0015238,GO:0015291,GO:0015297,GO:0015318,GO:0015556,GO:0015711,GO:0015740,GO:0015741,GO:0015744,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0019866,GO:0022804,GO:0022857,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0034220,GO:0042221,GO:0042493,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071422,GO:0071702,GO:0098656,GO:1903825,GO:1905039
Exons3
Evalue1.65e-112
EggNOG OGsKOG0756@1|root,KOG0756@2759|Eukaryota
EC3.2.1.166
Descriptionmitochondrial tricarboxylic acid transmembrane transport
Cds size660
COG categoryU
CAZyGH79
BRITEko00000,ko00001,ko00002,ko00536,ko01000,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854160.5874867-CDS-H-canaliculatus_M_contigs853:8332..86111696854160.5874867-CDS-H-canaliculatus_M_contigs853:8332..8611Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs853 8333..8611 +
1696854160.605597-CDS-H-canaliculatus_M_contigs853:9554..97221696854160.605597-CDS-H-canaliculatus_M_contigs853:9554..9722Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs853 9555..9722 +
1696854160.6169722-CDS-H-canaliculatus_M_contigs853:10305..105181696854160.6169722-CDS-H-canaliculatus_M_contigs853:10305..10518Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs853 10306..10518 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs853.2.1prot_H-canaliculatus_M_contigs853.2.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs853 8333..10518 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs853.2.1

>prot_H-canaliculatus_M_contigs853.2.1 ID=prot_H-canaliculatus_M_contigs853.2.1|Name=mRNA_H-canaliculatus_M_contigs853.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=220bp
GLVFLAGLGSGVTEAVLVVTPAEVCKIRMQSQYIVLAAGEGATGGAGAGV
GATAGTVKYRDVLQTAVVVAREEGVGALYKGLAPTVLRQGCNQAVNFTCY
QTFKTRLSSYLGRDELSSWQHMLLGGISGGIGPCVNNPLDVVKTRLQKQV
VIPGQAPKYGSFSSAIALIAKEEGIRALWKGLTPRLMRIMPGQAITFMTY
EWVSKRLPASLDGGAGLSS*
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mRNA from alignment at H-canaliculatus_M_contigs853:8333..10518+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs853.2.1 ID=mRNA_H-canaliculatus_M_contigs853.2.1|Name=mRNA_H-canaliculatus_M_contigs853.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=2186bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs853:8333..10518+ (Hapterophycus canaliculatus Oshoro7m male)
GGACTAGTATTCCTTGCGGGTCTCGGGTCGGGAGTAACGGAAGCCGTGTT
AGTGGTAACGCCTGCCGAGGTGTGCAAGATACGCATGCAATCGCAATACA
TAGTCCTCGCGGCCGGCGAGGGGGCCACCGGTGGTGCTGGAGCCGGCGTT
GGGGCTACCGCGGGCACCGTGAAGTACCGTGATGTGTTGCAGACGGCGGT
GGTGGTGGCGAGGGAGGAGGGCGTCGGGGCGCTGTACAAGGGGCTCGCTC
CGACGGTGCTGAGGCAAGGGTGCAATCAGGTGAGACGAGAGACGCTGGGG
CACATGCACGACGCGGGCAAGTATCCTATCCTCTTTTGTCCATCGCGAGG
AGATGTGATCGCCGCTGCGCCGGCAGCGCGTGAAAGTATCCACGATCCTC
GTAACGGCCGCCACCTCAGAGTTCACCTGCTCCGCATGCCGGTGAAGGGA
AGTGGTTTGGTCAGGCCGACCGCACACGCATGGAAGGCGAAGGGGAAGGA
AAACATAGGAGGGGTTGACGCCGGAGTTGGAGAACGCCGATACCGGGGGA
GCCCTGCATGGGTGCAATATTTCCAAAAGTCGACCAATTGAAGCGGCAAG
TTGCACGAGTAGGACATACTTCCACCCTTGGTGATAAAGGAAGAGCTACT
TTTGGTTTAAAGCTTCCCTGCGCTTTTCTACACTTCGGCGAGTGATGACT
TGGCCAAGATATTGAGATCGAGGGGCATATGCCAGCAAGTGGCCCCCTTC
TTCTTGTTTCCCTGAAAAGCGGAGAAGTTCTGCGGGAGGGGGTGCCATTT
CGAAGATAATTGACATCCTAACTTGCGGTTTGGCTATCCGCGCACGCGAG
AGGAAAGCTCCGCTGTCTGTCCGCAGAGAAACGCTCTTGGTCGGCGATTA
ACTTCTCTAACGGTGCAACGGTAGTTCGTCTGAATCGAGAAGGAGCAGAA
CGAACTTTGTAAGGGAGGCAAAGCATCTTGGACCTCTTTCGCGACTTTCG
ATCGCGCTCTCAAGAGCATTTGGTACCGTGCGTCGTTTTCGTTCCATGGC
TTCGTCCGTGCTGACGTCGTGCCATTCTCTGGCCCCCTACCTCTTCCCTT
CGTGCGCCCTTGTGTCTCTCCCTCCCCCCCTCTCTCCCTCGCTCTTGCTC
ACGCACTCGCGAACGGGGGACTTCGCCACTCCGACGGACGTCGCCACCCC
AAACCTAACCTGAATCGACCAGGCCGTCAACTTCACGTGCTACCAGACCT
TCAAGACCCGGCTGTCGTCTTACCTCGGCCGGGATGAGTTGTCGTCGTGG
CAGCACATGCTCCTGGGAGGGATCAGCGGCGGCATCGGCCCGTGCGTCAA
CAACCCGCTCGACGTCGTCAAGACCCGCTTGCAAAAGCAGGTGTGGCGCT
CTCGTGGAGCGGAGGTTTTCTTTCGGTCCGTGTGCCGAGTCGCGCCACGT
CTCGGAGGTTTCTCCGCCTCAAAAAAGCGAGCGAAAGGCGGTGGCTCTGT
GAGGTTGTGCGACGTGCGACACAAGGAGCTTTCTCCTTGGGTTCATTTGG
TGGTCTCGATCTCCCCACACATGCGCGCGCTAGAAGAAGCACCCGCGCGC
GCGTGCGTGCATTACTTAGCATCGCTGCCGTGGATGAATCCGTCTTGTGC
GGCACACGTTTTCACGAGCCGAGACAGCAGCTTTTGATTGTCGTCCGTCC
GTCGAGGTGGCGGTGACCCCGACGTCCCCTTCAAGCGAGTGCGCCGTTTG
TCGACCTCGTAGAGGCCAGCCAACGGTCCAGGCATCGAGATCGGCGCCGT
CACGTCTTGAGTCGCTGGTGTGCATCACGTGTTTCTCACTTGAGTCGACA
CAGACGGGGCCACCGGGGCACGCATCGCGAACCCTCCGCCGCCACGTGCG
TAACTCTGCCTATGTCTCTGTCTACGTCTCCGTCTCTTCTCTGTCTCTCT
CTCCCTCTTCTTCCCTTCTCCAGGTGGTGATCCCCGGGCAGGCGCCAAAG
TACGGCAGCTTCTCCTCGGCGATCGCGCTCATCGCGAAGGAGGAAGGGAT
CAGGGCCCTGTGGAAGGGTCTCACGCCCCGACTTATGCGGATCATGCCAG
GGCAGGCCATTACCTTCATGACCTACGAGTGGGTTTCTAAGCGGCTCCCG
GCGTCTCTGGATGGAGGGGCGGGGCTATCATCGTGA
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs853:8333..10518+

>mRNA_H-canaliculatus_M_contigs853.2.1 ID=mRNA_H-canaliculatus_M_contigs853.2.1|Name=mRNA_H-canaliculatus_M_contigs853.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=660bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs853:8333..10518+ (Hapterophycus canaliculatus Oshoro7m male)
GGACTAGTATTCCTTGCGGGTCTCGGGTCGGGAGTAACGGAAGCCGTGTT
AGTGGTAACGCCTGCCGAGGTGTGCAAGATACGCATGCAATCGCAATACA
TAGTCCTCGCGGCCGGCGAGGGGGCCACCGGTGGTGCTGGAGCCGGCGTT
GGGGCTACCGCGGGCACCGTGAAGTACCGTGATGTGTTGCAGACGGCGGT
GGTGGTGGCGAGGGAGGAGGGCGTCGGGGCGCTGTACAAGGGGCTCGCTC
CGACGGTGCTGAGGCAAGGGTGCAATCAGGCCGTCAACTTCACGTGCTAC
CAGACCTTCAAGACCCGGCTGTCGTCTTACCTCGGCCGGGATGAGTTGTC
GTCGTGGCAGCACATGCTCCTGGGAGGGATCAGCGGCGGCATCGGCCCGT
GCGTCAACAACCCGCTCGACGTCGTCAAGACCCGCTTGCAAAAGCAGGTG
GTGATCCCCGGGCAGGCGCCAAAGTACGGCAGCTTCTCCTCGGCGATCGC
GCTCATCGCGAAGGAGGAAGGGATCAGGGCCCTGTGGAAGGGTCTCACGC
CCCGACTTATGCGGATCATGCCAGGGCAGGCCATTACCTTCATGACCTAC
GAGTGGGTTTCTAAGCGGCTCCCGGCGTCTCTGGATGGAGGGGCGGGGCT
ATCATCGTGA
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