mRNA_H-canaliculatus_M_contigs8312.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs8312.1.1
Unique NamemRNA_H-canaliculatus_M_contigs8312.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs8312.1.1 vs.
Match: Proteasome (subunit alpha type n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW08_ECTSI)

HSP 1 Score: 190 bits (483), Expect = 2.600e-56
Identity = 99/103 (96.12%), Postives = 102/103 (99.03%), Query Frame = 1 
Query:    1 TDPAGTYSAWKANAIGGSNSNNMREFLEKNWSNDMDEGAAKKLCMKALLEVVDSGAKNMEIAIVRFGQPNEMMTEEMMQAVAAELEAEAEEAKEATAGDVQMT 309
            TDPAGTYSAWKANAIGGSNSNNMREFLEKNW+NDMDEGAAKKLCMKALLEVVDSGAKNMEIAIVRFG+ NEMMTEEMMQAVAAELEAEAEEAKEA+AGDVQMT
Sbjct:  149 TDPAGTYSAWKANAIGGSNSNNMREFLEKNWANDMDEGAAKKLCMKALLEVVDSGAKNMEIAIVRFGKANEMMTEEMMQAVAAELEAEAEEAKEASAGDVQMT 251
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs8312.1.1 vs.
Match: Proteasome (subunit alpha type n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9E6K7_HETAK)

HSP 1 Score: 144 bits (364), Expect = 1.640e-38
Identity = 77/104 (74.04%), Postives = 85/104 (81.73%), Query Frame = 1 
Query:    1 TDPAGTYSAWKANAIGGSNSNNMREFLEKNWSNDMDEGAAKKLCMKALLEVVDSGAKNMEIAIVRFGQPNEMMTEEMMQAVAAELEAEAEEAKEAT-AGDVQMT 309
            TDPAGTYSAWK N IGG NS +M+EFLEKNW  DMD  AAKKL +K LLEVVDSGAKNME+ +VR GQPNEMMTEE M AVAAE+EAEAEEAK  T AG+ + T
Sbjct:  147 TDPAGTYSAWKGNCIGGKNSKSMQEFLEKNWEEDMDAPAAKKLAIKCLLEVVDSGAKNMEVCVVRRGQPNEMMTEEAMSAVAAEIEAEAEEAKAGTGAGEEKST 250
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs8312.1.1 vs.
Match: Proteasome (subunit alpha type n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7L7_9STRA)

HSP 1 Score: 123 bits (309), Expect = 2.480e-30
Identity = 68/105 (64.76%), Postives = 82/105 (78.10%), Query Frame = 1 
Query:    1 TDPAGTYSAWKANAIGGSNSNNMREFLEKNWSND--MDEGAAKKLCMKALLEVVDSGAKNMEIAIVRFGQPNEMMTEEMMQAVAAELEAEAEEAKEATAGDVQMT 309
            TDPAGT+SAWKANAIGG +S NMREFLEKN+  +  +DE AA KLC+K LLEVVDSGAKNMEI ++R   P E M++  M AV A++EAEAEEAK+A+AG    T
Sbjct:  149 TDPAGTHSAWKANAIGGKSSKNMREFLEKNYPTEGGLDEAAAVKLCIKTLLEVVDSGAKNMEICLIRRDTPVETMSDTDMAAVVAQIEAEAEEAKKASAGSSMET 253
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs8312.1.1 vs.
Match: Proteasome (subunit alpha type n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M1D5_9STRA)

HSP 1 Score: 114 bits (286), Expect = 5.960e-27
Identity = 58/98 (59.18%), Postives = 76/98 (77.55%), Query Frame = 1 
Query:    1 TDPAGTYSAWKANAIGGSNSNNMREFLEKNWSNDMDEGAAKKLCMKALLEVVDSGAKNMEIAIVRFGQPNEMMTEEMMQAVAAELEAEAEEAKEATAG 294
            TDPAGTYSAWKANAIGG N   ++EFLEKNW+  + E  A +L +KALLEVVDSG+KNME+A+ R+GQP  ++ EE ++ + A++E E EEAK+  AG
Sbjct:  147 TDPAGTYSAWKANAIGGRNEKAVQEFLEKNWTASLAEADAIRLTVKALLEVVDSGSKNMELAVSRYGQPVRILKEEELEVIIADIEREIEEAKKEAAG 244
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs8312.1.1 vs.
Match: Proteasome (subunit alpha type n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRL4_9STRA)

HSP 1 Score: 114 bits (285), Expect = 8.160e-27
Identity = 59/99 (59.60%), Postives = 80/99 (80.81%), Query Frame = 1 
Query:    1 TDPAGTYSAWKANAIGGSNSNNMREFLEKNWSNDMDEGAAKKLCMKALLEVVDSGAKNMEIAIVRFGQPNEMMTEEMMQAVAAELEAEAEEAKE-ATAG 294
            TDPAGTYSAWKA A+GG NS+NM+E+LEK W++D++E  A +L +K LLEVVDSGAKNME+A++  G+P  M+ E  + A++A +EAE EEAK+ A+AG
Sbjct:  149 TDPAGTYSAWKATAVGGRNSSNMQEYLEKQWADDLEEENAIRLTVKTLLEVVDSGAKNMEVAVITQGRPMRMLDEATLAALSASIEAEQEEAKKKASAG 247
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs8312.1.1 vs.
Match: Proteasome (subunit alpha type n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EX89_TRICV)

HSP 1 Score: 110 bits (274), Expect = 3.650e-25
Identity = 58/98 (59.18%), Postives = 71/98 (72.45%), Query Frame = 1 
Query:    1 TDPAGTYSAWKANAIGGSNSNNMREFLEKNWSNDMDEGAAKKLCMKALLEVVDSGAKNMEIAIVRFGQPNEMMTEEMMQAVAAELEAEAEEAKEATAG 294
            TDPAGT+S+WKA  IGG N+ ++REFLEKN+ + MDEG   KL ++ALLEVVDSGAKNMEI +VR G   E M E  + AV  E+EAE EE K  + G
Sbjct:  158 TDPAGTHSSWKAQVIGGRNAKSLREFLEKNYEDGMDEGGCVKLSVRALLEVVDSGAKNMEICVVRRGGVRETMEESAVDAVVKEIEAEQEEGKRGSTG 255
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs8312.1.1 vs.
Match: Proteasome (subunit alpha type n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F6I3_9STRA)

HSP 1 Score: 108 bits (271), Expect = 1.130e-24
Identity = 60/102 (58.82%), Postives = 73/102 (71.57%), Query Frame = 1 
Query:    4 DPAGTYSAWKANAIGGSNSNNMREFLEKNWSNDMDEGAAKKLCMKALLEVVDSGAKNMEIAIVRFGQPNEMMTEEMMQAVAAELEAEAEEAK-EATAGDVQM 306
            DP+GTY AWKANAIGG N   MREFLEK W  D++E  A KL +KALLEVVDSG+KNME+ +VR G   E + +E + A+  E+EAE EEAK  AT  D +M
Sbjct:  162 DPSGTYFAWKANAIGGRNFKPMREFLEKEWVPDLEEAQALKLTVKALLEVVDSGSKNMEVVVVRRGAGPETLDDEALTAIVTEVEAEQEEAKVAATTEDAEM 263
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs8312.1.1 vs.
Match: Proteasome (subunit alpha type n=3 Tax=Odontellaceae TaxID=2749909 RepID=A0A6U2BRH1_9STRA)

HSP 1 Score: 107 bits (267), Expect = 3.410e-24
Identity = 56/93 (60.22%), Postives = 70/93 (75.27%), Query Frame = 1 
Query:    1 TDPAGTYSAWKANAIGGSNSNNMREFLEKNWSNDMDEGAAKKLCMKALLEVVDSGAKNMEIAIVRFGQPNEMMTEEMMQAVAAELEAEAEEAK 279
            TDPAGT+S+WKA  IGG N+ ++REFLEKN+ +DM+E A  KL ++ALLEVVDSGAKNMEI +VR G   EMM E  +  +  E+E EAEE K
Sbjct:  153 TDPAGTHSSWKAQVIGGRNAKSLREFLEKNYEDDMEEDACIKLGIRALLEVVDSGAKNMEICVVRAGGKREMMEESGVDKIVKEIEEEAEEGK 245
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs8312.1.1 vs.
Match: Proteasome (subunit alpha type n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RQS1_9STRA)

HSP 1 Score: 107 bits (267), Expect = 3.720e-24
Identity = 54/92 (58.70%), Postives = 68/92 (73.91%), Query Frame = 1 
Query:    4 DPAGTYSAWKANAIGGSNSNNMREFLEKNWSNDMDEGAAKKLCMKALLEVVDSGAKNMEIAIVRFGQPNEMMTEEMMQAVAAELEAEAEEAK 279
            DP+GTY  WKANAIGG N   MREFLEK W   + +  A KL +KALLEVVDSG+KNME+ ++R G+P   M++E +QAV  ++EAE EEAK
Sbjct:  149 DPSGTYFGWKANAIGGRNFKGMREFLEKEWQEGLSQAEATKLTVKALLEVVDSGSKNMELVVIRRGEPAATMSDESVQAVVDQVEAEMEEAK 240
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs8312.1.1 vs.
Match: Proteasome (subunit alpha type n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UCU6_9STRA)

HSP 1 Score: 104 bits (260), Expect = 3.250e-23
Identity = 58/100 (58.00%), Postives = 72/100 (72.00%), Query Frame = 1 
Query:    1 TDPAGTYSAWKANAIGGSNSNNMREFLEKNWSNDMDEGAAKKLCMKALLEVVDSGAKNMEIAIVRFGQPNEMMTEEMMQAVAAELEAEAEEAK-EATAGD 297
            TDPAGT+S+WKA  IGG N+ ++REFLEKN+  +MDE    +L ++ALLEVVDSGAKNME+ IVR G    MM E  +  V   +EA AEE K +ATAGD
Sbjct:  150 TDPAGTHSSWKAQVIGGRNAKSLREFLEKNYEEEMDEATCVRLSVQALLEVVDSGAKNMEVCIVREGDVMHMMEEAEVDVVVKGIEATAEEGKSKATAGD 249
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8312.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Proteasome2.600e-5696.12subunit alpha type n=2 Tax=Ectocarpus TaxID=2879 R... [more]
Proteasome1.640e-3874.04subunit alpha type n=2 Tax=Heterosigma akashiwo Ta... [more]
Proteasome2.480e-3064.76subunit alpha type n=1 Tax=Tribonema minus TaxID=3... [more]
Proteasome5.960e-2759.18subunit alpha type n=1 Tax=Spumella elongata TaxID... [more]
Proteasome8.160e-2759.60subunit alpha type n=2 Tax=Monodopsidaceae TaxID=4... [more]
Proteasome3.650e-2559.18subunit alpha type n=1 Tax=Trieres chinensis TaxID... [more]
Proteasome1.130e-2458.82subunit alpha type n=2 Tax=Dictyocha speculum TaxI... [more]
Proteasome3.410e-2460.22subunit alpha type n=3 Tax=Odontellaceae TaxID=274... [more]
Proteasome3.720e-2458.70subunit alpha type n=1 Tax=Rhizochromulina marina ... [more]
Proteasome3.250e-2358.00subunit alpha type n=1 Tax=Attheya septentrionalis... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs8312contigH-canaliculatus_M_contigs8312:179..2395 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FW08
Preferred namePSMA7
PFAMsProteasome,Proteasome_A_N
Model size833
Max annot lvl2759|Eukaryota
KEGG koko:K01191,ko:K02731
KEGG Pathwayko00511,ko03050,map00511,map03050
KEGG ModuleM00337,M00340
Hectar predicted targeting categoryother localisation
GOsGO:0000502,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005773,GO:0005774,GO:0005819,GO:0005829,GO:0005839,GO:0005840,GO:0005856,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0007088,GO:0007346,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009507,GO:0009524,GO:0009536,GO:0009896,GO:0009987,GO:0010498,GO:0010499,GO:0010564,GO:0010638,GO:0010965,GO:0012505,GO:0015630,GO:0016020,GO:0016579,GO:0019538,GO:0019773,GO:0019941,GO:0022626,GO:0030071,GO:0030163,GO:0031090,GO:0031331,GO:0031597,GO:0031974,GO:0031981,GO:0032270,GO:0032436,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0034399,GO:0034515,GO:0036211,GO:0042175,GO:0042802,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043632,GO:0043687,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044456,GO:0044464,GO:0045202,GO:0045732,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045931,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051128,GO:0051130,GO:0051247,GO:0051603,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0062033,GO:0065007,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0090068,GO:0098588,GO:0098794,GO:0098805,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1903052,GO:1903364,GO:1905368,GO:1905369,GO:1905818,GO:1905820,GO:1990111,GO:1990904,GO:2001252
Exons3
Evalue7.16e-43
EggNOG OGsCOG0638@1|root,KOG0183@2759|Eukaryota
Ec32 ortholog descriptionproteasome subunit alpha type 7
Ec32 orthologEc-01_002900.1
EC3.2.1.24,3.4.25.1
Descriptionthreonine-type endopeptidase activity
Cds size246
COG categoryO
CAZyGH38
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03051,ko04131
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854146.9241447-UTR-H-canaliculatus_M_contigs8312:178..2441696854146.9241447-UTR-H-canaliculatus_M_contigs8312:178..244Hapterophycus canaliculatus Oshoro7m maleUTRH-canaliculatus_M_contigs8312 179..244 +
1696854146.9750454-UTR-H-canaliculatus_M_contigs8312:1874..23951696854146.9750454-UTR-H-canaliculatus_M_contigs8312:1874..2395Hapterophycus canaliculatus Oshoro7m maleUTRH-canaliculatus_M_contigs8312 1875..2395 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854146.939717-CDS-H-canaliculatus_M_contigs8312:244..3161696854146.939717-CDS-H-canaliculatus_M_contigs8312:244..316Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8312 245..316 +
1696854146.9510536-CDS-H-canaliculatus_M_contigs8312:1107..11821696854146.9510536-CDS-H-canaliculatus_M_contigs8312:1107..1182Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8312 1108..1182 +
1696854146.9629521-CDS-H-canaliculatus_M_contigs8312:1775..18741696854146.9629521-CDS-H-canaliculatus_M_contigs8312:1775..1874Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8312 1776..1874 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs8312.1.1prot_H-canaliculatus_M_contigs8312.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs8312 245..1874 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs8312.1.1

>prot_H-canaliculatus_M_contigs8312.1.1 ID=prot_H-canaliculatus_M_contigs8312.1.1|Name=mRNA_H-canaliculatus_M_contigs8312.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=82bp
MREFLEKNWSNDMDEGAAKKLCMKALLEVVDSGAKNMEIAIVRFGQPNEM
MTEEMMQAVAAELEAEAEEAKEATAGDVQMT*
back to top

mRNA from alignment at H-canaliculatus_M_contigs8312:179..2395+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs8312.1.1 ID=mRNA_H-canaliculatus_M_contigs8312.1.1|Name=mRNA_H-canaliculatus_M_contigs8312.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=2217bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8312:179..2395+ (Hapterophycus canaliculatus Oshoro7m male)
ACTGACCCGGCGGGAACGTACTCGGCGTGGAAGGCCAACGCTATCGGCGG
GAGCAACAGCAACAACATGCGGGAGTTCTTGGAGAAGAACTGGTCGAACG
ACATGGACGAAGGGGCGGCAAAGAAGCTCTGCATGAAGGTAGGTGGCCTT
TCCTGTCCGCTGCTGCTGCTGCTGCTGCTGCCGCTTGTTGCCATGTTTCC
GTTGCTGCTGCGTTGTACAAGTGACGCAGATGCCAGTTTTGGAGGTGCGG
AACGAACCGTCGCGGCAGGCACCATGACTTACTCGAAACGAAAGTGGCAC
GGTAGACGGAAGAGCGCGGACAATCGGGAGTGCCTCGAATGCTCGTCGGT
AGGCCTTTTTTTTTGTCGTTGCGGCCGGGCTTATGAGCCAGGTGCCCCTA
GAGCGACGGGCACCGCAGCAAGCGCACCACGCTCACAACTCACCCTGTCT
TCACACCCAATTTTGAAGGGAAACCAGACACCGGTACTTGTATGGCTCGA
GCGTTGCCGGCCGATCGGTGTCTCTCGCCACCCGTGTCTCGTCTCAGGAA
GTCCGGGCTTCGATTGGCGATGTTATGATTGTGGTGGGAGTGCGGGCTTA
GGCGGAGGAGGATTGTGGCGTCGACGCCGATCCTTGTCCGTAACCGCGCT
CTTAACCCCTTGTCTACCCCTCAGCACAGGCCTTGCTCGAGGTTGACGTC
GGCCCCGATGCTTGACGCTGTCCGCCTCGTTGTTGAGTGCACACTTCGCT
GTGGGAGGTGTATCTTGCCATCCGCTGCGGTTTGCGCAACCGGTCAACGT
GCACTCGCCTTGCCATCCCAATCTCGAAGCAATTTTCTTTTTTTAAGATG
TACTCTACTCCCCAACGTCACCCATCCTCCCACCTTTCGCCTGCCTCAAC
GGTGCCGCTCTGATGTCGCCCGAATTTAGGCTTTGCTCGAGGTGGTGGAT
TCGGGGGCAAAGAACATGGAGATCGCGATCGTGCGGTTCGGGCAGCCCAA
CGAGGTGAAAAGAGAGAGGGAAAAAGAGAAGAAAAAAAAATGCTCTGGAT
AAAATTTGGGACGAGGTCTCTCCTCAGTTTATCACTCTCCGCGCTTTTGT
AAACTCTCTCGCGCCTTGCTCCCGGTACGCGGACGGTTGGTGGGGGTGTC
GATATCCCATAAAGGGATGTTCGTTGTCGCGATTTGAATTGCTTCAAGTT
CTCCGCGACAGCGTGTTCTTAAGCGGCGTCTGACTGCTCACCCGCCAGCT
CGGCGCAGATCTCGTAGGCTGTATCAAGGGGCAAGGGAAACCTCGATGAG
TCGATTTGATGAATCGATCTTGTAGTCGCCCTGTCTGGGTGCATCAGCTT
TGTAGAAGCTCTCTTTCAGCCCAACCAGAGGAATGCTCGGGAGTTGCTTC
GGGAAAAGACGGGTGCGCAGCGACGTCCTGGTTAGCCACGGCCGTGCTCG
TCCGTGTGCGGGTGTAGTCCCCTTTCAGTGGCGAAAGCATTGCCGGCTTG
ATCGACAAACGGGCCGAGTCTGTGGCCAACCGAAACACCACGTTATCTAA
AAACAAGGAAACTCCTCGCGCGGGGGTACTTGGTTTCTCTCGAGCAGATG
ATGACGGAGGAGATGATGCAGGCGGTGGCCGCTGAGCTGGAGGCGGAAGC
GGAGGAGGCGAAGGAAGCCACTGCGGGGGACGTACAAATGACGTAGACGT
GGTCAAATAGTTCAGCCCGCGCGACGAGTGGACGTGCCTGCCGCCACCGC
CGCGTGCACCGTCGAAGCACGCCTCGCGGTTGGTTGGCTGGGTGGCAGAG
ACCTACAGCGACCGTTGCGGATGGTGGTGTGCGCTGCTATTCTGGCGGTG
CGCGGCCTTCTTGGGTATTTTTCGCGTTTTTTTGCAGAATTGAAGGTAAC
AACTAAAAAGTGCGCCGGAGAGTGTCTCATCTTGCACTACGGGCGAATCG
ATCGAGTTTGAGCATAAGTCCGCCGTGAAGCAGTCTCGGTCTTTCGGCGC
TCTGCTCGAACCGCGAGGATCACGTGCGGATGGGGGGAGAGCCGTGGAGT
ACACGGTTAAGGCGCGTGGGCTCCACAGCATCCACTTGATAAGCTTACAG
TTAGTTCGTGGTGCTTGCCTTCTTGCGGCTCGTTTATCGTGTCTTTTTTC
CGGATGAACGCAGTTCGACGAAGAAAGGAAGCCCCAGGAGCACCTTCGCG
GTACATTTGTTTCCAAG
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs8312:179..2395+

>mRNA_H-canaliculatus_M_contigs8312.1.1 ID=mRNA_H-canaliculatus_M_contigs8312.1.1|Name=mRNA_H-canaliculatus_M_contigs8312.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=246bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8312:179..2395+ (Hapterophycus canaliculatus Oshoro7m male)
ATGCGGGAGTTCTTGGAGAAGAACTGGTCGAACGACATGGACGAAGGGGC
GGCAAAGAAGCTCTGCATGAAGGCTTTGCTCGAGGTGGTGGATTCGGGGG
CAAAGAACATGGAGATCGCGATCGTGCGGTTCGGGCAGCCCAACGAGATG
ATGACGGAGGAGATGATGCAGGCGGTGGCCGCTGAGCTGGAGGCGGAAGC
GGAGGAGGCGAAGGAAGCCACTGCGGGGGACGTACAAATGACGTAG
back to top