mRNA_H-canaliculatus_M_contigs8285.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs8285.1.1
Unique NamemRNA_H-canaliculatus_M_contigs8285.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs8285.1.1 vs.
Match: Nudix (hydrolase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JXT8_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 1.080e-56
Identity = 94/113 (83.19%), Postives = 102/113 (90.27%), Query Frame = 1
Query:    1 VHPADGNLQLPQAQAETELGKVANEYMSRGEMLPSEVVLSLIKKRLAQRDCVQNGWILDGFPRSREQAADLGENDIVPDLIIMLERPDDLVKEFSLGRCTDPTTGVIYHPKFS 339
            V+ A GNL   +AQAET LGK+ANE+MSRGEMLPSEVVLSL+ KRLAQRDC QNGWILDGFPRSREQAADLGE DIVPDLI+MLERPD LVKEF LGRCTDPTTGVIYHPK++
Sbjct:  124 VYIASGNLLRSEAQAETSLGKIANEFMSRGEMLPSEVVLSLVTKRLAQRDCAQNGWILDGFPRSREQAADLGEEDIVPDLIVMLERPDGLVKEFILGRCTDPTTGVIYHPKYA 236          
BLAST of mRNA_H-canaliculatus_M_contigs8285.1.1 vs.
Match: Adenylate (kinase family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMM1_9STRA)

HSP 1 Score: 176 bits (445), Expect = 7.990e-50
Identity = 83/133 (62.41%), Postives = 104/133 (78.20%), Query Frame = 1
Query:   16 GNLQLPQAQAETELGKVANEYMSRGEMLPSEVVLSLIKKRLAQRDCVQNGWILDGFPRSREQAADLGENDIVPDLIIMLERPDDLVKEFSLGRCTDPTTGVIYHPKFSPPPPEVVPRLTWRTDDTEDVIESRL 414
            GNL   + +AE+ LG +A E M++G++LPS ++LSLI+ RL  RDC  NGWILDGFPRS EQA  L E ++VPD I++LERPD+LV+EF+LGR  D  TG IYHPKF+PPPP+ V RL WRTDDT +VIESRL
Sbjct:   81 GNLLRAEVKAESVLGAIAEEQMAKGKLLPSRLLLSLIQARLTHRDCGANGWILDGFPRSPEQARLLAEAELVPDCIVVLERPDELVREFALGRMQDSATGTIYHPKFNPPPPDAVHRLVWRTDDTPEVIESRL 213          
BLAST of mRNA_H-canaliculatus_M_contigs8285.1.1 vs.
Match: Nudix (hydrolase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CV51_9STRA)

HSP 1 Score: 171 bits (433), Expect = 2.220e-47
Identity = 79/138 (57.25%), Postives = 105/138 (76.09%), Query Frame = 1
Query:    1 VHPADGNLQLPQAQAETELGKVANEYMSRGEMLPSEVVLSLIKKRLAQRDCVQNGWILDGFPRSREQAADLGENDIVPDLIIMLERPDDLVKEFSLGRCTDPTTGVIYHPKFSPPPPEVVPRLTWRTDDTEDVIESRL 414
            VH A GNL   + QAETELG +A E + +GE+LP E++++L+KKR++  DC +NGWILDGFPR+  QA  + + DI+PD +I L+RPD+LV+E+ LGR  D  TGVIYHPKF+PPPPE+V RL WRTDDT + +  RL
Sbjct:  103 VHIATGNLLRAEIQAETELGLIAREQIEKGELLPDELMIALVKKRVSADDCRRNGWILDGFPRTVRQAKLMQKADIIPDAVIELDRPDELVEEWCLGRYHDAATGVIYHPKFNPPPPEIVSRLIWRTDDTPETLRRRL 240          
BLAST of mRNA_H-canaliculatus_M_contigs8285.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4HAZ8_GUITH)

HSP 1 Score: 149 bits (375), Expect = 1.740e-41
Identity = 71/138 (51.45%), Postives = 98/138 (71.01%), Query Frame = 1
Query:    1 VHPADGNLQLPQAQAETELGKVANEYMSRGEMLPSEVVLSLIKKRLAQRDCVQNGWILDGFPRSREQAADLGENDIVPDLIIMLERPDDLVKEFSLGRCTDPTTGVIYHPKFSPPPPEVVPRLTWRTDDTEDVIESRL 414
            VH + G+L   + +  +ELG  A EY+  G++LP ++V+S++KKR+ Q DC+ +GWILDGFPR+ EQA  L E  I+PD +I+L+RPD++V+E+  GR  DPTTG+IYHPKF+P P EV   L  R DDT D I  RL
Sbjct:  136 VHISTGDLLRAEMKVGSELGARAFEYVKEGKLLPDDLVISIVKKRIEQDDCIYHGWILDGFPRTVEQAKMLIEEKIIPDHVIILDRPDEVVREWCSGRAFDPTTGIIYHPKFNPAPAEVETNLIRRIDDTVDAINLRL 273          
BLAST of mRNA_H-canaliculatus_M_contigs8285.1.1 vs.
Match: Adenylate (kinase n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UIP9_9CHLO)

HSP 1 Score: 145 bits (365), Expect = 4.910e-41
Identity = 71/138 (51.45%), Postives = 97/138 (70.29%), Query Frame = 1
Query:    1 VHPADGNLQLPQAQAETELGKVANEYMSRGEMLPSEVVLSLIKKRLAQRDCVQNGWILDGFPRSREQAADLGENDIVPDLIIMLERPDDLVKEFSLGRCTDPTTGVIYHPKFSPPPPEVVPRLTWRTDDTEDVIESRL 414
             H + G+L   +  A T+ GK+A EYM RG+++P+EVV+ ++K RL+Q D  +NGW+LDG+PRS +QA  L E  I PDL + LE PDD++ E  +GR  DP TG IYH KF+PPP E+V RLT R+DDTE+   +RL
Sbjct:   40 THISAGDLLRAEVAAGTKNGKIAKEYMDRGDLVPNEVVIDMVKDRLSQDDAQKNGWLLDGYPRSADQAKALEEAGIHPDLFLNLEVPDDVLVERVVGRRMDPETGKIYHIKFNPPPEEIVGRLTQRSDDTEEKARNRL 177          
BLAST of mRNA_H-canaliculatus_M_contigs8285.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E8E5_9CRYP)

HSP 1 Score: 152 bits (385), Expect = 2.300e-40
Identity = 73/138 (52.90%), Postives = 100/138 (72.46%), Query Frame = 1
Query:    1 VHPADGNLQLPQAQAETELGKVANEYMSRGEMLPSEVVLSLIKKRLAQRDCVQNGWILDGFPRSREQAADLGENDIVPDLIIMLERPDDLVKEFSLGRCTDPTTGVIYHPKFSPPPPEVVPRLTWRTDDTEDVIESRL 414
            VH + G+L   + +  +ELG  A E++  G++LP ++V+S++KKR+AQ DC+ +GWILDGFPR+ EQA  L E  I+PD +I+L+RPDD+V+E+  GR  DPTTGVIYHPKF+P PPEV   L  R DDT + I  RL
Sbjct:  136 VHISTGDLLRAEMKIGSELGARAYEFIREGKLLPDQLVISIVKKRIAQDDCIYHGWILDGFPRTVEQAKMLIEEKIIPDHVIILDRPDDVVREWCSGRAFDPTTGVIYHPKFNPAPPEVESNLIRRIDDTVEAINRRL 273          
BLAST of mRNA_H-canaliculatus_M_contigs8285.1.1 vs.
Match: Adenylate (kinase n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UGY8_9CHLO)

HSP 1 Score: 145 bits (365), Expect = 5.180e-40
Identity = 71/138 (51.45%), Postives = 97/138 (70.29%), Query Frame = 1
Query:    1 VHPADGNLQLPQAQAETELGKVANEYMSRGEMLPSEVVLSLIKKRLAQRDCVQNGWILDGFPRSREQAADLGENDIVPDLIIMLERPDDLVKEFSLGRCTDPTTGVIYHPKFSPPPPEVVPRLTWRTDDTEDVIESRL 414
             H + G+L   +  A T+ GK+A EYM RG+++P+EVV+ ++K RL+Q D  +NGW+LDG+PRS +QA  L E  I PDL + LE PDD++ E  +GR  DP TG IYH KF+PPP E+V RLT R+DDTE+   +RL
Sbjct:  131 THISAGDLLRAEVAAGTKNGKIAKEYMDRGDLVPNEVVIDMVKDRLSQDDAQKNGWLLDGYPRSADQAKALEEAGIHPDLFLNLEVPDDVLVERVVGRRMDPETGKIYHIKFNPPPEEIVGRLTQRSDDTEEKARNRL 268          
BLAST of mRNA_H-canaliculatus_M_contigs8285.1.1 vs.
Match: Adenylate (kinase n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HE26_9CHLO)

HSP 1 Score: 138 bits (348), Expect = 4.710e-38
Identity = 67/138 (48.55%), Postives = 92/138 (66.67%), Query Frame = 1
Query:    1 VHPADGNLQLPQAQAETELGKVANEYMSRGEMLPSEVVLSLIKKRLAQRDCVQNGWILDGFPRSREQAADLGENDIVPDLIIMLERPDDLVKEFSLGRCTDPTTGVIYHPKFSPPPPE-VVPRLTWRTDDTEDVIESR 411
            VH + G+L   +  A TE GK A EYM RG+++P+EVV+ ++  RL+  DCV+NGW+LDG+PRS +QA  L    I P+L ++L+ P+D++ E   GR  DP TG IYH KF PPP E +  RLT R+DDTE+    R
Sbjct:   70 VHVSVGDLLRAEVAAGTENGKQAKEYMDRGDLVPNEVVVGMVASRLSAEDCVENGWLLDGYPRSEDQATALASTGIEPELFLLLDVPEDILVERVTGRRLDPETGDIYHMKFKPPPSEEIAARLTTRSDDTEEACRHR 207          
BLAST of mRNA_H-canaliculatus_M_contigs8285.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XQ85_DIALT)

HSP 1 Score: 137 bits (346), Expect = 1.300e-37
Identity = 67/138 (48.55%), Postives = 92/138 (66.67%), Query Frame = 1
Query:    1 VHPADGNLQLPQAQAETELGKVANEYMSRGEMLPSEVVLSLIKKRLAQRDCVQNGWILDGFPRSREQAADLGENDIVPDLIIMLERPDDLVKEFSLGRCTDPTTGVIYHPKFSPPPPEVVPRLTWRTDDTEDVIESRL 414
            VH + G++     QA T++G  A EYM  G+++P EV++ L+++RLAQ DC  NGW+LDGFPR+  QAA L    I PDL++ L  PD ++ E  +GR  DP TG IYH  F PPP +VVPR+T R+DDT +  + RL
Sbjct:   87 VHLSTGDMLRAAVQAGTKVGLAAKEYMDGGKLVPDEVIIDLVRERLAQPDCEANGWLLDGFPRTAVQAAALRAAQIEPDLVLYLNVPDSMLIERVVGRRLDPETGRIYHLTFDPPPSDVVPRMTHRSDDTAEKAQVRL 224          
BLAST of mRNA_H-canaliculatus_M_contigs8285.1.1 vs.
Match: Adenylate (kinase n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T984_9CHLO)

HSP 1 Score: 137 bits (346), Expect = 1.800e-37
Identity = 67/138 (48.55%), Postives = 92/138 (66.67%), Query Frame = 1
Query:    1 VHPADGNLQLPQAQAETELGKVANEYMSRGEMLPSEVVLSLIKKRLAQRDCVQNGWILDGFPRSREQAADLGENDIVPDLIIMLERPDDLVKEFSLGRCTDPTTGVIYHPKFSPPPPEVVPRLTWRTDDTEDVIESRL 414
             H + G+L   +  A TE GK A  +M  GE++P EVV++++K RLA+ D    GW+LDG+PRS  QAA L E  I PD+ ++LE PDD++ E  +GR  DP TG IYH K+ PPPPE+  RLT R+DD E+  ++RL
Sbjct:  107 AHISAGDLLRAEVAAGTEAGKRAEGFMKAGELVPDEVVITMVKNRLAEDDAQTKGWLLDGYPRSASQAAALKEAGIEPDIFLLLEVPDDILIERVVGRRMDPETGKIYHVKYFPPPPEIEDRLTQRSDDNEEAAKNRL 244          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8285.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Nudix1.080e-5683.19hydrolase domain-containing protein n=2 Tax=Ectoca... [more]
Adenylate7.990e-5062.41kinase family protein n=1 Tax=Tribonema minus TaxI... [more]
Nudix2.220e-4757.25hydrolase domain-containing protein n=1 Tax=Nannoc... [more]
Hypothetical1.740e-4151.45protein n=1 Tax=Guillardia theta TaxID=55529 RepID... [more]
Adenylate4.910e-4151.45kinase n=1 Tax=Picocystis salinarum TaxID=88271 Re... [more]
Hypothetical2.300e-4052.90protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S... [more]
Adenylate5.180e-4051.45kinase n=1 Tax=Picocystis salinarum TaxID=88271 Re... [more]
Adenylate4.710e-3848.55kinase n=1 Tax=Pycnococcus provasolii TaxID=41880 ... [more]
Uncharacterized1.300e-3748.55protein n=1 Tax=Diacronema lutheri TaxID=2081491 R... [more]
Adenylate1.800e-3748.55kinase n=1 Tax=Tetraselmis chuii TaxID=63592 RepID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs8285contigH-canaliculatus_M_contigs8285:591..1864 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LDL6
PFAMsADK,DUF4743,Dpy-30,NUDIX
Model size414
Max annot lvl2759|Eukaryota
KEGG rclassRC00002,RC00017
KEGG koko:K00939,ko:K00949,ko:K06672,ko:K14787
KEGG ReactionR00127,R00619,R01547,R11319
KEGG Pathwayko00230,ko00730,ko01100,ko01110,ko01130,ko04111,map00230,map00730,map01100,map01110,map01130,map04111
KEGG ModuleM00049
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004788,GO:0006139,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009108,GO:0009110,GO:0009228,GO:0009229,GO:0009987,GO:0016462,GO:0016740,GO:0016772,GO:0016778,GO:0016787,GO:0016817,GO:0016818,GO:0017110,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0036172,GO:0042357,GO:0042364,GO:0042723,GO:0042724,GO:0043094,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044715,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
Exons3
Evalue8.34e-74
EggNOG OGsCOG0494@1|root,COG0563@1|root,KOG3078@2759|Eukaryota,KOG4313@2759|Eukaryota
Ec32 ortholog descriptionAdenylate kinase family protein
Ec32 orthologEc-15_000120.1
EC2.7.4.3,2.7.6.2
Description8-oxo-dGDP phosphatase activity
Cds size414
COG categoryL
BRITEko00000,ko00001,ko00002,ko01000,ko03009,ko03036,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854144.576717-CDS-H-canaliculatus_M_contigs8285:590..7681696854144.576717-CDS-H-canaliculatus_M_contigs8285:590..768Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8285 591..768 +
1696854144.595284-CDS-H-canaliculatus_M_contigs8285:1351..15061696854144.595284-CDS-H-canaliculatus_M_contigs8285:1351..1506Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8285 1352..1506 +
1696854144.6057212-CDS-H-canaliculatus_M_contigs8285:1783..18641696854144.6057212-CDS-H-canaliculatus_M_contigs8285:1783..1864Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8285 1784..1864 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs8285.1.1prot_H-canaliculatus_M_contigs8285.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs8285 591..1864 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs8285.1.1

>prot_H-canaliculatus_M_contigs8285.1.1 ID=prot_H-canaliculatus_M_contigs8285.1.1|Name=mRNA_H-canaliculatus_M_contigs8285.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=138bp
VHPADGNLQLPQAQAETELGKVANEYMSRGEMLPSEVVLSLIKKRLAQRD
CVQNGWILDGFPRSREQAADLGENDIVPDLIIMLERPDDLVKEFSLGRCT
DPTTGVIYHPKFSPPPPEVVPRLTWRTDDTEDVIESRL
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mRNA from alignment at H-canaliculatus_M_contigs8285:591..1864+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs8285.1.1 ID=mRNA_H-canaliculatus_M_contigs8285.1.1|Name=mRNA_H-canaliculatus_M_contigs8285.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=1274bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8285:591..1864+ (Hapterophycus canaliculatus Oshoro7m male)
GTCCATCCTGCCGACGGGAACTTGCAATTACCGCAGGCGCAAGCGGAGAC TGAGCTGGGAAAGGTGGCGAACGAGTACATGTCTCGGGGGGAGATGCTGC CATCGGAGGTGGTGTTGTCGCTTATCAAAAAGAGATTGGCACAGAGGGAC TGCGTGCAGAACGGGTGGATTTTGGACGGTGAGTATCTATATCCCTCAAC AAATTCGATGAACGGGCGTGCTGCTGTTGTTATCTTCGTTGTCGTTGCTT TCACCTAAACACCGCTGTGATCCCTATGCTCAGCACGTACCTTCGTACCT TCAGATACTCGTTTTCCACGCATCATGTGTCTTCACCGGTAAGAGATCTA AAGAGTGGTCACAGGAGAGAAGAAGGAAGTGAACATGAGAGAAATGGAAA TCGCCCCGAAGACAGAAATTCTTTTCCCCAATTTTCCATCGCTGACATTC ATGATACGGAGCCGCCTTCCAAAACAATACTGGCACACCTTCACGTCCAC GACCTCACCGAAACAATCGATGCACAACTGTCGGACAGTCGCCCTTGAGT CTACTTGCACATTCAGGCCGAAGTGTCCATTACTTTGAATCATGTCGTAC CCCGAGCATTCCATTCACCGATAACATATCTTTGTCGAGGAAAAACACCT CTTACGCAAATCTTATGTTTTGCCTTGAGGGGGTCACTGGCGCTCATCCC CCCCGCAGGTGTGGCAATGCCATGATTCGATATCGCTTGAAAAATTGAAC TTTTGGCCCAGGGTTTCCCAGATCGCGGGAACAAGCAGCGGATCTCGGCG AGAATGACATCGTGCCCGACTTGATCATCATGCTAGAGCGGCCCGATGAC TTGGTGAAGGAATTTAGCCTGGGACGATGCACGGATCCCACGACTGGTGT AATTTATCATCCAAAGGTATGTATCACGCATGTCATCCATGGTTGCCTGG AGCTGGCGTTTGATTGTGGGCGAAGCTGGATGGGTAATGCTGATGGGGAA TTGGGGTTGCCGAAGCGCGCGTCATCCAGATCTCGTCCTACCGCGTCTAG CATCGATGCTGATTGCTTTCCAACTATCGCAACAAGATAGATACCTGCCT GCTTTTCTGCACTTGTACTGTGCGTTTTTCTTTGAGTTCGGCTGCTTCTG ACCTAATTTCAATAACCATTACTTTTGTCGTTGAATCGAGCAGTTTTCGC CGCCTCCACCCGAAGTCGTGCCCCGGTTGACTTGGAGAACAGATGACACG GAGGACGTCATCGAATCACGCTTA
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs8285:591..1864+

>mRNA_H-canaliculatus_M_contigs8285.1.1 ID=mRNA_H-canaliculatus_M_contigs8285.1.1|Name=mRNA_H-canaliculatus_M_contigs8285.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=414bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8285:591..1864+ (Hapterophycus canaliculatus Oshoro7m male)
GTCCATCCTGCCGACGGGAACTTGCAATTACCGCAGGCGCAAGCGGAGAC
TGAGCTGGGAAAGGTGGCGAACGAGTACATGTCTCGGGGGGAGATGCTGC
CATCGGAGGTGGTGTTGTCGCTTATCAAAAAGAGATTGGCACAGAGGGAC
TGCGTGCAGAACGGGTGGATTTTGGACGGGTTTCCCAGATCGCGGGAACA
AGCAGCGGATCTCGGCGAGAATGACATCGTGCCCGACTTGATCATCATGC
TAGAGCGGCCCGATGACTTGGTGAAGGAATTTAGCCTGGGACGATGCACG
GATCCCACGACTGGTGTAATTTATCATCCAAAGTTTTCGCCGCCTCCACC
CGAAGTCGTGCCCCGGTTGACTTGGAGAACAGATGACACGGAGGACGTCA
TCGAATCACGCTTA
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