mRNA_H-canaliculatus_M_contigs8280.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs8280.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIZ5_ECTSI) HSP 1 Score: 386 bits (991), Expect = 1.220e-131 Identity = 180/213 (84.51%), Postives = 195/213 (91.55%), Query Frame = 1
Query: 1 IVFPTAGVHPYHVDGCGSLEDAMAEIAKLAADEEVRCIGECGLDFSEGFPSPVLQLPWFERQVQLACELKKPLFLHEREAFVDFLKVLRRYDVLHGLPPCLVHCFTGSEEELAAYLDMGFFVSVAGGICREKSGAVLREAVKRIPLNRLMVETDAPYLGFTGCRKGHSKPKKQNPNVPSALPSVVRVVAECMALPYEEVARATLQNSRDFFGM 639
+VF TAGVHPYHV GCGSLEDAMA IA LAA EE RC+GECGLD+SEGFP+ LQLPWFERQV+LAC+LKKPLFLHER AFVDF +VLRRYD HGLPPCLVHCFTGSEEEL AY+DMGFFVSVAGGICREKSGA LR AVKRIPL+RLMVETDAPYLGF+GCRKGH KPKKQNPNVPSALP+VVRV+AEC+ LP+EEVA+ATLQNSR FFGM
Sbjct: 130 VVFSTAGVHPYHVQGCGSLEDAMASIATLAATEEARCVGECGLDYSEGFPAAELQLPWFERQVELACKLKKPLFLHERAAFVDFSEVLRRYDASHGLPPCLVHCFTGSEEELTAYIDMGFFVSVAGGICREKSGAALRAAVKRIPLDRLMVETDAPYLGFSGCRKGHDKPKKQNPNVPSALPAVVRVLAECLGLPFEEVAQATLQNSRQFFGM 342
BLAST of mRNA_H-canaliculatus_M_contigs8280.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z870_9STRA) HSP 1 Score: 270 bits (689), Expect = 3.220e-86 Identity = 130/214 (60.75%), Postives = 161/214 (75.23%), Query Frame = 1
Query: 1 IVFPTAGVHPYHVDGCGSLEDAMAEIAKLAADEEVRCIGECGLDFSEGFPSPVLQLPWFERQVQLACELKKPLFLHEREAFVDFLKVLRRYDVLH-GLPPCLVHCFTGSEEELAAYLDMGFFVSVAGGICREKSGAVLREAVKRIPLNRLMVETDAPYLGFTGCRKGHSKPKKQNPNVPSALPSVVRVVAECMALPYEEVARATLQNSRDFFGM 639
I++PTAG+HPY V CG LE AM+ +A+L AD C+GECGLDFSEGFP P LQLP+FERQVQLA E +KPLFLHER A F VLR + GLPPCLVHCFTG+ EL+ YL MGF++ V G + ++ G VLR ++++PL+RLMVETDAPYLGF GCRKGHS+PK+Q PNVPSALP VV+ VA+ M + +VA + +N+R FFGM
Sbjct: 104 ILYPTAGIHPYCVKDCGELEPAMSTLAELLADPLFTCVGECGLDFSEGFPEPELQLPFFERQVQLAVETRKPLFLHERLASRPFTDVLRAANAAPPGLPPCLVHCFTGTGSELSVYLQMGFYIGVTGFLLKKPHGNVLRGCLQQVPLDRLMVETDAPYLGFPGCRKGHSQPKRQYPNVPSALPLVVQAVADAMGVSALDVAAHSTRNARKFFGM 317
BLAST of mRNA_H-canaliculatus_M_contigs8280.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GTS9_9STRA) HSP 1 Score: 212 bits (539), Expect = 2.930e-64 Identity = 104/213 (48.83%), Postives = 147/213 (69.01%), Query Frame = 1
Query: 4 VFPTAGVHPYHVDGCGSLEDAMAEIAKLAADEEVRCIGECGLDFSEGFPSPVLQLPWFERQVQLACELKKPLFLHEREAFVDFLKVLRRY-DVLHGLPPCLVHCFTGSEEELAAYLDMGFFVSVAGGICREKSGAVLREAVKRIPLNRLMVETDAPYLGFTGCRKGHS--KPKKQNPNVPSALPSVVRVVAECMALPYEEVARATLQNSRDFF 633
VFPTAGVHP+H D S ED + ++ +L++ +V +GECGLD+SEGFPSP LQ W E Q+++AC ++KPLF+HER AFVDF++++ + + P VHCFTG+E EL AY+ F++ + G IC+ K GA LR+ V +IP RL++ETDAPY+GF CR+ + + KKQ PNVPSALP V VA + + +VA+ T++N+R F
Sbjct: 60 VFPTAGVHPFHADTAPS-EDELNQLRELSS--QVCAVGECGLDYSEGFPSPELQKAWLEAQIRIACAIQKPLFMHERRAFVDFMEIITKVRKEVSEFPNVAVHCFTGTEVELQAYIKSDFYIGITGFICK-KHGASLRDLVTQIPKERLLIETDAPYMGFKQCRRNETDYRAKKQYPNVPSALPLVAETVAVMLEMSVAQVAQLTVRNARRFL 268
BLAST of mRNA_H-canaliculatus_M_contigs8280.1.1 vs.
Match: Uncharacterized (protein n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GIL0_9STRA) HSP 1 Score: 212 bits (540), Expect = 7.730e-64 Identity = 107/213 (50.23%), Postives = 143/213 (67.14%), Query Frame = 1
Query: 4 VFPTAGVHPYHVDGCGSLEDAMAEIAKLAADEEVRCIGECGLDFSEGFPSPVLQLPWFERQVQLACELKKPLFLHEREAFVDFLKVLRRYDVLHGLPPCLVHCFTGSEEELAAYLDMGFFVSVAGGICREKSGAVLREAVKR--IPLNRLMVETDAPYLGFTGCRKGH-SKPKKQNPNVPSALPSVVRVVAECMALPYEEVARATLQNSRDFF 633
VFPTAGVHPY+ D A ++ +AAD V +GECGLD+SEGFPSP LQL WF Q+ LA L+KPLFLHER A F++ L + + LPP VHCFTG+ +E A Y+ MGF++ + G +C++ GA L+ + +PL+RL+VETDAPY+GF GCR S PK+Q PNVP++LP VV+ +A C+ + EVAR T +N+R F
Sbjct: 103 VFPTAGVHPYNATKPFDPSD-FAILSSMAADPTVVAVGECGLDYSEGFPSPDLQLEWFGPQLSLAVSLQKPLFLHERLAHKAFVEALTPH--IPTLPPACVHCFTGTADEAAVYIGMGFYIGITGFVCKQPHGAALQSMLSSGVLPLDRLVVETDAPYMGFPGCRSFEPSGPKRQFPNVPTSLPHVVQAIAGCLGVSAAEVARVTTRNARQFL 312
BLAST of mRNA_H-canaliculatus_M_contigs8280.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TGJ1_9STRA) HSP 1 Score: 212 bits (539), Expect = 1.030e-63 Identity = 108/213 (50.70%), Postives = 143/213 (67.14%), Query Frame = 1
Query: 4 VFPTAGVHPYHVDGCGSLEDAMAEIAKLAADEEVRCIGECGLDFSEGFPSPVLQLPWFERQVQLACELKKPLFLHEREAFVDFLKVLRRYDVLHGLPPCLVHCFTGSEEELAAYLDMGFFVSVAGGICREKSGAVLRE--AVKRIPLNRLMVETDAPYLGFTGCRKGHSKP-KKQNPNVPSALPSVVRVVAECMALPYEEVARATLQNSRDFF 633
VFPTAGVHPY+ E+ A ++ LAA+ E+ +GECGLD+S+GFPSP LQL WF Q+ LA L+KPLFLHER A FL L + L LPP VHCFTG+ +E Y+ MGF++ + G +C+E GA L+ A +PL+RL+VETDAPY+GF GCR S K+Q PNVP++LP VV+ +A+C+ + EVAR T +N+R F
Sbjct: 101 VFPTAGVHPYNATKPFDAEE-FATLSVLAANTEIVAVGECGLDYSDGFPSPDLQLSWFGPQLSLAVSLQKPLFLHERLAHEPFLDALTPH--LDNLPPACVHCFTGTTDEAQVYIKMGFYIGITGFVCKEPHGAALQSMLAAGILPLDRLVVETDAPYMGFPGCRGFESTGGKRQFPNVPTSLPKVVQAIADCVGVSPAEVARITTRNARQFL 310
BLAST of mRNA_H-canaliculatus_M_contigs8280.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Globisporangium ultimum TaxID=2052682 RepID=K3WCX9_GLOUD) HSP 1 Score: 210 bits (535), Expect = 2.080e-63 Identity = 104/213 (48.83%), Postives = 141/213 (66.20%), Query Frame = 1
Query: 4 VFPTAGVHPYHVDGCGSLEDAMAEIAKLAADEEVRCIGECGLDFSEGFPSPVLQLPWFERQVQLACELKKPLFLHEREAFVDFLKVLRRYDVLHG--LPPCLVHCFTGSEEELAAYLDMGFFVSVAGGICREKSGAVLREAVKRIPLNRLMVETDAPYLGFTGCRKGH-SKPKKQNPNVPSALPSVVRVVAECMALPYEEVARATLQNSRDFF 633
+FPTAGVHPYH + E+ +A ++ LA EE R +GECGLD+S FP LQ WF+ Q+ LAC L+KPLFLHER A DF+ ++++ PP +VHCFTG+E+EL Y+ GF++ + G IC+++ GA LR V+ IPL +L++ETDAPY+GF CR+ S PKKQ PNVPSALP VV +A + +E+A T N+R F
Sbjct: 74 LFPTAGVHPYHALALPTPEE-LATLSDLAQLEECRAVGECGLDYSPSFPDAKLQQEWFKVQLDLACRLQKPLFLHERLAHDDFMALIKQCQQKFNDYFPPVVVHCFTGNEQELREYVRQGFYIGITGFICKKEHGASLRAMVQHIPLQKLVIETDAPYMGFPKCRRYEPSHPKKQYPNVPSALPQVVEAIATALGKTPQEIALITKANARRFL 285
BLAST of mRNA_H-canaliculatus_M_contigs8280.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WGG9_9STRA) HSP 1 Score: 211 bits (538), Expect = 2.750e-63 Identity = 109/217 (50.23%), Postives = 145/217 (66.82%), Query Frame = 1
Query: 4 VFPTAGVHPYHVDGCGSLEDAMAEIAKLAADEEVRCIGECGLDFSEGFPSPVLQLPWFERQVQLACELKKPLFLHEREAFVDFLKVL----RRYDVLHGLPPCLVHCFTGSEEELAAYLDMG--FFVSVAGGICREKSGAVLREAVKRIPLNRLMVETDAPYLGFTGCRKGHSKP-KKQNPNVPSALPSVVRVVAECMALPYEEVARATLQNSRDFF 633
+FPTAGVHPYH + E+ +A + L EVR +GECGLD+S GFP+P LQ WF Q+ LAC L+KPLFLHER A DFLK++ +++D PP +VHCFTG+E EL AYL G +++ V G IC+++ GA LRE V+ +PL+RL++ETDAPY+GF CR+ KKQ PNVPSALP VV+ VA + +E+ + T N+R F
Sbjct: 119 LFPTAGVHPYHALASPTTEE-LATLRDLLELGEVRAVGECGLDYSPGFPAPELQKKWFVEQLALACRLRKPLFLHERLAHEDFLKLVDDATKQFDGY--FPPAVVHCFTGNERELQAYLARGDDWYIGVTGFICKKQHGAALREMVRHVPLDRLVLETDAPYMGFPKCRRDEPNDRKKQYPNVPSALPQVVQAVAAALGRSPQEIGKITKANARRFL 332
BLAST of mRNA_H-canaliculatus_M_contigs8280.1.1 vs.
Match: Aste57867_22335 (protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LL64_9STRA) HSP 1 Score: 209 bits (531), Expect = 1.330e-62 Identity = 106/212 (50.00%), Postives = 142/212 (66.98%), Query Frame = 1
Query: 7 FPTAGVHPYHVDGCGSLEDAMAEIAKLAADEEVRCIGECGLDFSEGFPSPVLQLPWFERQVQLACELKKPLFLHEREAFVDFLKVLRRYDVLHGLPPCLVHCFTGSEEELAAYLDMGFFVSVAGGICREKSGAVLREAVK--RIPLNRLMVETDAPYLGFTGCRKGHSKP-KKQNPNVPSALPSVVRVVAECMALPYEEVARATLQNSRDFF 633
FPTAGVHPY+ ++ +A LA + E+ +GECGLD+SEGFPSP QL WF Q+ LA L+KPLFLHER A F+ LR ++ LPP VHCFTG+ +E YL MGF++ + G +C+ GA L+ +K +PL+RL+VETDAPY+GF CR S K+Q PNVP++LP VV+V+A+C+ LP +VARAT +N+R F
Sbjct: 96 FPTAGVHPYNATKAFDTDEFQV-LATLAGESEIVAVGECGLDYSEGFPSPEHQLAWFLPQLSLAVTLQKPLFLHERLAHAPFVDALRLHEA--NLPPACVHCFTGTADEAKVYLSMGFYIGITGFVCKPH-GADLQTMLKDGTLPLDRLVVETDAPYMGFPNCRAFESTAAKRQYPNVPTSLPKVVQVIADCLGLPPADVARATTRNARRFL 303
BLAST of mRNA_H-canaliculatus_M_contigs8280.1.1 vs.
Match: TatD (related DNase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G9I0_PHYRM) HSP 1 Score: 206 bits (523), Expect = 2.890e-62 Identity = 105/217 (48.39%), Postives = 145/217 (66.82%), Query Frame = 1
Query: 4 VFPTAGVHPYHVDGCGSLEDAMAEIAKLAADEEVRCIGECGLDFSEGFPSPVLQLPWFERQVQLACELKKPLFLHEREAFVDFLKVLR----RYDVLHGLPPCLVHCFTGSEEELAAYLDMG--FFVSVAGGICREKSGAVLREAVKRIPLNRLMVETDAPYLGFTGCRKGHSK-PKKQNPNVPSALPSVVRVVAECMALPYEEVARATLQNSRDFF 633
+FPTAGVHPY+ + ++ + + + E+VR +GECGLD+S FP P Q WF Q+ +AC+LKKPLFLHER A DF++++ R+D PP +VHCFTG+EEEL AY+ G +++ + G IC+ K GA L+E VK IPL+RL++ETDAPY+GF CR+ K PKKQ PNVPSALP V ++VA + +E+A+ T N+R F
Sbjct: 25 LFPTAGVHPYNARAMPTQQE-LTSLQGMIEMEDVRAVGECGLDYSPSFPEPESQKKWFAEQLTMACKLKKPLFLHERLAHQDFIQLIEEASNRFDGY--FPPAVVHCFTGNEEELKAYVARGDNWYIGITGFICK-KQGAALKEMVKLIPLDRLVLETDAPYMGFPKCRRAEPKDPKKQYPNVPSALPQVAQIVATALNRSPQEIAKLTTANARRFL 237
BLAST of mRNA_H-canaliculatus_M_contigs8280.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0Q697_SAPDV) HSP 1 Score: 208 bits (529), Expect = 4.750e-62 Identity = 108/215 (50.23%), Postives = 141/215 (65.58%), Query Frame = 1
Query: 1 IVFPTAGVHPYHVDGCGSLEDAMAEIAKLAADEEVRCIGECGLDFSEGFPSPVLQLPWFERQVQLACELKKPLFLHEREAFVDFLKVLRRYDVLHGLPPCLVHCFTGSEEELAAYLDMGFFVSVAGGICREKSG---AVLREAVKRIPLNRLMVETDAPYLGFTGCRK-GHSKPKKQNPNVPSALPSVVRVVAECMALPYEEVARATLQNSRDFF 633
++FPTAGVHPY+ A A ++ LA E+ +GECGLD+S GFPSP LQL WF Q+ LAC+L+KPLFLHER A F+ L LPP +VHCFTG+ E A Y+ MG ++ V G +C+ ++LR+ V +PL+RL+VETDAPY+GF CRK + PKKQ PNV +ALPSVV +AEC+ LP ++VA AT N+R F
Sbjct: 113 VLFPTAGVHPYNATSAFD-PAAFATLSALAKQPEMVAVGECGLDYSPGFPSPELQLEWFLPQLDLACDLQKPLFLHERLAHEPFVAALTERAA--KLPPTVVHCFTGTAAEAATYVSMGLYIGVTGFLCKSHGANLQSLLRDGV--VPLDRLVVETDAPYMGFPHCRKLAATHPKKQYPNVATALPSVVEALAECLGLPAKDVAAATTYNARKFL 322 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8280.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs8280.1.1 >prot_H-canaliculatus_M_contigs8280.1.1 ID=prot_H-canaliculatus_M_contigs8280.1.1|Name=mRNA_H-canaliculatus_M_contigs8280.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=195bp MAEIAKLAADEEVRCIGECGLDFSEGFPSPVLQLPWFERQVQLACELKKPback to top mRNA from alignment at H-canaliculatus_M_contigs8280:193..3106+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs8280.1.1 ID=mRNA_H-canaliculatus_M_contigs8280.1.1|Name=mRNA_H-canaliculatus_M_contigs8280.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=2914bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8280:193..3106+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs8280:193..3106+ >mRNA_H-canaliculatus_M_contigs8280.1.1 ID=mRNA_H-canaliculatus_M_contigs8280.1.1|Name=mRNA_H-canaliculatus_M_contigs8280.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=585bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8280:193..3106+ (Hapterophycus canaliculatus Oshoro7m male)back to top |