mRNA_H-canaliculatus_M_contigs7779.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs7779.1.1
Unique NamemRNA_H-canaliculatus_M_contigs7779.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7779.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD99_ECTSI)

HSP 1 Score: 166 bits (420), Expect = 5.210e-48
Identity = 89/122 (72.95%), Postives = 96/122 (78.69%), Query Frame = 1
Query:    1 MAIEKELSGLNRELSMFPERAFDFKNAGTVIIQQDVADVGSIVWDAEIILAHYLDQAYGSRLSGMRVLELGAGTGLAGIVAARLGASVVLTDQSKLLPTLMKNARANAWDLEVGQSRPPTDG 366
            MAIE ELSGLNRELSMFPERAF+F  AG V+I+QDVADVGSIVWDAEI+LAHYLDQAYGSRLSGMRVLELGAGTGLAG+              SKLLPTL+ NARANA DLE  +  P T G
Sbjct:    1 MAIEDELSGLNRELSMFPERAFEFSKAGEVVIEQDVADVGSIVWDAEILLAHYLDQAYGSRLSGMRVLELGAGTGLAGL--------------SKLLPTLIANARANAQDLEYSRQPPTTPG 108          
BLAST of mRNA_H-canaliculatus_M_contigs7779.1.1 vs.
Match: Putative (methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAM0_9STRA)

HSP 1 Score: 137 bits (346), Expect = 6.630e-37
Identity = 70/102 (68.63%), Postives = 82/102 (80.39%), Query Frame = 1
Query:   16 ELSGLNRELSMFPERAFDFKNAGTVIIQQDVADVGSIVWDAEIILAHYLDQAYGSRLSGMRVLELGAGTGLAGIVAARLGASVVLTDQSKLLPTLMKNARAN 321
            ELS  + +L+ FP+RAF+F +AGTV+I QD  DVGSIVWDAE++LAH+LD      L GM VLELGAGTGLAGIVAARLGA VVLTDQ+KLLP L +NA AN
Sbjct:   30 ELSANDHDLARFPQRAFEFTHAGTVLIDQDFGDVGSIVWDAEVVLAHHLDATVSKSLRGMSVLELGAGTGLAGIVAARLGAHVVLTDQAKLLPQLQRNADAN 131          
BLAST of mRNA_H-canaliculatus_M_contigs7779.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QEG4_SAPDV)

HSP 1 Score: 95.5 bits (236), Expect = 6.790e-22
Identity = 50/93 (53.76%), Postives = 63/93 (67.74%), Query Frame = 1
Query:   16 ELSGLNRELSMFPERAFDFKNAGTVIIQQDVADVGSIVWDAEIILAHYLDQAYGSRLSGMRVLELGAGTGLAGIVAARLGASVVLTDQSKLLP 294
            ELS L+  L+   ER F F  AG+V+I QD+A VG  VWDA ++L+HYLD      + G R++ELGAGT L  I+AARLGA VV TD S +LP
Sbjct:    6 ELSTLDPSLTYARERRFHFAAAGSVVILQDIAHVGGTVWDAGVVLSHYLDTLGSIAMKGKRLVELGAGTALPSIIAARLGADVVATDMSDVLP 98          
BLAST of mRNA_H-canaliculatus_M_contigs7779.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YJ95_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.320e-21
Identity = 49/94 (52.13%), Postives = 63/94 (67.02%), Query Frame = 1
Query:   13 KELSGLNRELSMFPERAFDFKNAGTVIIQQDVADVGSIVWDAEIILAHYLDQAYGSRLSGMRVLELGAGTGLAGIVAARLGASVVLTDQSKLLP 294
            +ELS ++R L+    R F +  AG V I QD+A VG  VWDA ++L+HYLD    + L G R++ELGAGT L  IV+ARLGA VV TD S +LP
Sbjct:    5 RELSTVDRSLTYAQTRRFVYAAAGVVTIDQDIAHVGGTVWDAGVVLSHYLDSLGSAALQGKRIIELGAGTALPSIVSARLGAVVVATDMSDVLP 98          
BLAST of mRNA_H-canaliculatus_M_contigs7779.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U606_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 2.240e-21
Identity = 53/109 (48.62%), Postives = 66/109 (60.55%), Query Frame = 1
Query:    7 IEKELSGLNRELSMFPERAFDFKNAGTVIIQQDVADVGSIVWDAEIILAHYLDQAYGSRLSGMRVLELGAGTGLAGIVAARLGASVVLTDQSKLLPTLMKNARANAWDL 333
            I  ELS L+R L+   ER F + NAG V I QD+ADVG  VWDA I+L+HYLD    + L G  ++ELGAGT +  IVA+RLGA  V TD  ++L       R N   L
Sbjct:    4 IRSELSFLDRNLTYAKERGFVYPNAGRVTILQDIADVGGTVWDASIVLSHYLDSLGTTVLQGKSLVELGAGTAVPSIVASRLGARAVATDMKQVLLYTEMAIRGNCDQL 112          
BLAST of mRNA_H-canaliculatus_M_contigs7779.1.1 vs.
Match: Methyltransferase (21A-like isoform 1 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZGK2_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 8.200e-19
Identity = 50/109 (45.87%), Postives = 63/109 (57.80%), Query Frame = 1
Query:   16 ELSGLNRELSMFPERAFDFKNAGTVIIQQDVADVGSIVWDAEIILAHYLDQAYGSRLSGMRVLELGAGTGLAGIVAARLGASVVLTDQSKLLPTLMKNARANAWDLEVG 342
            ELS + REL+   ER F+F  AG V I QD+  V   VWDA I+L+HYLD      L G  +LE+GAGT L  IV ARLGA V+ TD  + L    +   AN  +  +G
Sbjct:    2 ELSSIKRELTYAKERHFNFAIAGYVKIIQDITQVSGTVWDASIVLSHYLDSLGTITLEGKTILEIGAGTALPSIVGARLGAIVIATDLIEALEYTNRAIEANCTNNILG 110          
BLAST of mRNA_H-canaliculatus_M_contigs7779.1.1 vs.
Match: Aste57867_13708 (protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KZD0_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 1.250e-18
Identity = 44/92 (47.83%), Postives = 62/92 (67.39%), Query Frame = 1
Query:   16 ELSGLNRELSMFPERAFDFKNAGTVIIQQDVADVGSIVWDAEIILAHYLDQAYGSRLSGMRVLELGAGTGLAGIVAARLGASVVLTDQSKLL 291
            ELS ++R+L+   ER F+F++ G V I QD++ VG  +WDA ++L+HYLD    + LSG  ++E+GAGT L  IV ARLG  VV TD   +L
Sbjct:    8 ELSYVDRDLTYAKERHFNFEHGGHVSILQDISHVGGTIWDASVVLSHYLDSLGPATLSGKSMVEIGAGTALPSIVGARLGMDVVATDMQDVL 99          
BLAST of mRNA_H-canaliculatus_M_contigs7779.1.1 vs.
Match: Methyltransferase-like (protein 21D (Fragment) n=3 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=A0A2L2YAX9_PARTP)

HSP 1 Score: 80.9 bits (198), Expect = 2.290e-16
Identity = 39/92 (42.39%), Postives = 62/92 (67.39%), Query Frame = 1
Query:   67 DFKNAGTVIIQQDVADVGSIVWDAEIILAHYLD--QAYGSRLSGMRVLELGAGTGLAGIVAARLGASVVLTDQSKLLPTLMKNARANAWDLE 336
            ++ N    ++Q  V DVG +VWDA I++  YLD  Q + + +SG  V+++G+GTG+AG+ AA LGA V+LTD  +++P L KN ++N   L+
Sbjct:   14 EYTNVELKLVQHSVGDVGCVVWDAGIVMGKYLDYQQKFVNSMSGKMVVDIGSGTGVAGLFAAALGAKVILTDLPEIIPILEKNIQSNCKALK 105          
BLAST of mRNA_H-canaliculatus_M_contigs7779.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R8XEB0_9CRUS)

HSP 1 Score: 80.1 bits (196), Expect = 4.970e-16
Identity = 44/103 (42.72%), Postives = 60/103 (58.25%), Query Frame = 1
Query:   91 IIQQDVADVGSIVWDAEIILAHYLDQAYGSR---LSGMRVLELGAGTGLAGIVAARLGASVVLTDQSKLLPTLMKNARANA-------------WDLEVGQSR 351
            I+Q+ + DVG +VWDA ++LA YL++        L G +VLELGAGTGL G+VAA  G  V LTD  ++ P L +N R NA             W  ++GQS+
Sbjct:   21 IVQKTIGDVGCVVWDAALVLAKYLERLCSEEKDFLRGKKVLELGAGTGLVGLVAAYFGGDVTLTDLPEMFPLLGENVRRNALICEGRATSKVLIWGWDLGQSK 123          
BLAST of mRNA_H-canaliculatus_M_contigs7779.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Pteromalinae TaxID=272242 RepID=A0A7M7LJE7_NASVI)

HSP 1 Score: 78.2 bits (191), Expect = 2.760e-15
Identity = 42/78 (53.85%), Postives = 53/78 (67.95%), Query Frame = 1
Query:   94 IQQDVADVGSIVWDAEIILAHYLDQAYGSR--LSGMRVLELGAGTGLAGIVAARLGASVVLTDQSKLLPTLMKNARAN 321
            +Q+ + DV  ++WDA ++LA YLD+       L G RVLELGAG G AGIVAA  GA VVLTD + +LP L KN +AN
Sbjct:   24 LQKKIGDVSCVIWDAALVLAKYLDKTSQKNKWLKGKRVLELGAGLGCAGIVAACFGAHVVLTDLATVLPMLEKNIKAN 101          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7779.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized5.210e-4872.95protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD99... [more]
Putative6.630e-3768.63methyltransferase-domain-containing protein n=1 Ta... [more]
Uncharacterized6.790e-2253.76protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QEG... [more]
Uncharacterized1.320e-2152.13protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepI... [more]
Uncharacterized2.240e-2148.62protein n=1 Tax=Aphanomyces invadans TaxID=157072 ... [more]
Methyltransferase8.200e-1945.8721A-like isoform 1 n=1 Tax=Thraustotheca clavata T... [more]
Aste57867_137081.250e-1847.83protein n=1 Tax=Aphanomyces stellatus TaxID=120398... [more]
Methyltransferase-like2.290e-1642.39protein 21D (Fragment) n=3 Tax=Parasteatoda tepida... [more]
Hypothetical4.970e-1642.72protein n=1 Tax=Darwinula stevensoni TaxID=69355 R... [more]
Uncharacterized2.760e-1553.85protein n=2 Tax=Pteromalinae TaxID=272242 RepID=A0... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs7779contigH-canaliculatus_M_contigs7779:201..3209 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog112098.XP_008610405.1
PFAMsMethyltransf_16
Model size366
Max annot lvl2759|Eukaryota
KEGG koko:K21804
Hectar predicted targeting categoryother localisation
Exons3
Evalue1.11e-22
EggNOG OGsKOG2793@1|root,KOG2793@2759|Eukaryota
Descriptionlysine N-methyltransferase activity
Cds size366
COG categoryS
BRITEko00000,ko01000,ko03110
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854114.6456459-CDS-H-canaliculatus_M_contigs7779:200..3291696854114.6456459-CDS-H-canaliculatus_M_contigs7779:200..329Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7779 201..329 -
1696854114.658609-CDS-H-canaliculatus_M_contigs7779:1350..14851696854114.658609-CDS-H-canaliculatus_M_contigs7779:1350..1485Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7779 1351..1485 -
1696854114.670679-CDS-H-canaliculatus_M_contigs7779:3107..32091696854114.670679-CDS-H-canaliculatus_M_contigs7779:3107..3209Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7779 3108..3209 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs7779.1.1prot_H-canaliculatus_M_contigs7779.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs7779 201..3209 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs7779.1.1

>prot_H-canaliculatus_M_contigs7779.1.1 ID=prot_H-canaliculatus_M_contigs7779.1.1|Name=mRNA_H-canaliculatus_M_contigs7779.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=122bp
MAIEKELSGLNRELSMFPERAFDFKNAGTVIIQQDVADVGSIVWDAEIIL
AHYLDQAYGSRLSGMRVLELGAGTGLAGIVAARLGASVVLTDQSKLLPTL
MKNARANAWDLEVGQSRPPTDG
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mRNA from alignment at H-canaliculatus_M_contigs7779:201..3209-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs7779.1.1 ID=mRNA_H-canaliculatus_M_contigs7779.1.1|Name=mRNA_H-canaliculatus_M_contigs7779.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=3009bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7779:201..3209- (Hapterophycus canaliculatus Oshoro7m male)
ATGGCAATCGAAAAAGAGCTATCGGGGCTCAACCGCGAGCTTTCCATGTT TCCTGAGCGAGCCTTCGACTTCAAGAATGCCGGAACTGTGATCATTCAAC AGGTACGTACACGGGACTGAGACATTGCACTTCCTCTTCGACCGACTGCT GCGTCCTACTTTGTAGCAGTCTGTGCCATGAACTGCTGTGGTATCGTCTG TGCATATCATGTGTCCTTCGTAAGATCCTGGTGGCGATCATATTCCTCGT ACATAACCGTGGTCCTGCTTCCCTGTGAAGTACTCTCCGTACATGTTATA GTGCGATAGGACACGGCCAGTCGAAGGTGCCCGTTTGTGCTCGCAATCTT GAGGTCGACTTCTAATTGTATGTTGTTATGTACTCCGAGCGTTGTTTCTT CAGTCACTACTTGCAGGCGTTGTGCTTGCTTTGCTTGAGTGACGGCATGG ATAGTCCTGGCTGCCACTGTCCAGGGAGTAGTACTACAGTAGCAGCTTTC AGGCGGGCATTCGACTACTACTTCGAAGTAGTTGGCATGGAGACAACTAT AAAACCCTTGTGTAGCGAGACCTCTCGGTTGGTGGCCGTCACGAGCAGCC GACCAAGCTACGCCGACCGGTACTGGTCATGTGTAATATGAACCGAGCGA GTGGCGACGCCTTGAACTTTTTTCTCCCTGGGGTTCCTGAGGGGGGGGAA GGCTGTGCCAATCGGTCCCGCGTGTAGGGTGCCTCCAGCTTGATTTGAAG TGGTCGTCAATAACAGCACTTTGGGGGAAAAGCAAGACCCACCTGTACAG AGGACCAGATGTCGATCTGACGGCCCCTGAGAGGAGAGAAAAATACAAAA ATACGGCACGATTCCTGAGCAACGTGTGGCGATGGTCCGACAGGAAATAG CCGTGCATCAGGCTTTTGTCGTCAATAGCTTGAAAGTCTCAATCCTGGGG TTTCAAAAAATACGGCCTCCTACAAAGGAAGCAGGCAGGCTCACAGGTAT ATCCTCGGAGTGTATCGCTGTGTAGGATGGGCGTGGGAAGTTTCTGGAGG TAGGCTGCTGGGCGTGATCGGCGGCAAAAGTCATCGGATCACAAGCGTTT CACTGGCGAGAATGCCCCATCCGGTGCATGTAGACAGAGGGGCATCCGAC CCGCGCTGTTCGCCGTCCCGACCAAGTCGACCACGACACGCCCCACTGCT GCTGCGGGCATCTTCCAACAGGAAATACCACTCTCTGTGCTTGCGTCAAG CGTTTGTGGGCGTTTCTTGCTGCTGTGGGGAAAAGAACAGGGCTAAGTCG TTCTGCTGGGAATTTTCCGGAGCGCACCAAGAACGGCAGCAGCGACCGTA CCAGAATCTTGTTTTCGAAGCCGAGCCGTGGGGCTCCGGGGGCCCCAACC CCCCCCTCGGCAATTTTTTCCCACCACCAAAATATGGTAGGGGTGATCCA AAAGAGCGCCGCCCTAAACACATGGTCTCTTACAGGTACCGTATCGCAGA TCGACTGCTGTTTGGTAGTGAGTCCGCTCGGCTCATCACTCATCCAATTT ACAGCAAATACAAGTATCAGGTATCAAACAAGCGTTGTTTGGGTGTTGTA CACTCTAGGTTTAATAGCGCGGGCCTTATCTACGAATATCCGTCACCTTT AAACGTATTGATTCCGGTGCCCCGAGGTAAAAAAATATTCCCCGTTTCGA CACCCGTGCCCGATCGCCCGGCAGGATGTGGCCGACGTGGGGTCAATCGT GTGGGACGCGGAGATTATTCTCGCCCACTACCTGGACCAGGCATACGGTT CCCGGCTGAGCGGAATGCGGGTGTTGGAGCTCGGGGCTGGAACTGGACTT GCTGGCATCGTAAGTGCATCGAGACGATCAATTTTTTCTCGAATGAACTT CGCATAAATGCAACATAGAAATACAAGGATCTTTCGGATGCTGAACGCGT TTTTGGAGGCTAAGTGCTTGTATCCGTCATAACCATACGATTGTTTGGTA CGCAGTCCTGACATATTTCGGCACGTTTCTGCGACGAACCATGCATCGAC TTGCTTCTGCCGATACCTCGAGACAGAATCCTTCTGTATCCTCTTCGTTG TCGATGTCTACGTGTGACAGCAAAACAAGAGTGCGCGAAGAATACGGAAG ATTTTAATGGGTGGAACCCAGTTTCCAATATCAGGTTTCCAACTGTGTCA TGTCAAGCCTGATGTCGCGCACCCGCGATACCGTTAGCAAGAGGCAATGC GCGCTTCCCCAACAGCGTTCATGCCTTCATCGAACCAAACAGTCAGACTG CCAGCCCATTTTTCTGGTAACGGTAGTAGCACTGAGTGGAAGTAGATGGA TGAGAACTACCTGAAAGGGCAGGAGCAAGCAGTTAGACTGCCAGCCCATT TTTCTGGTAACGGTTGTAGCACTGAGTGGAAGCAGATGGATGAGAACTAC CTGAAAGGGCAGGAGACAATGTTATTGACCCCTGATCTCATCTGTGCTGT GTCACTCCTGGAGTAGCTTCCTTGATGTTTCAAGGAAACCAATGTTGACT CACCTGTCGAGACTATACCTACCGGAAGAACAGTTTTATGCACACGTCGA AAGTACAAGCATCGGTGCCCATGCTCACAAAGAGACGCCATGCCCCTCAC GCGCGCAAATATGGCACGTTCCGAAAAATCTTCAGAAACCTCTCCCAAGG GCAACATAAAAAAATTAGTCGCGGGTCGTGGGCACGTAATAGAGCACAGA GTATCACCAGCAGGCAAAAAGTGAACAAAAACTACTGGTTGCCCGGTATC CAACCCATCATCCCCGGGCTTTAACTCTCAATACGAAACTCGAACTTCAT TTTCAACAAAATTCCTCGGTAAACACGCAGGTCGCGGCACGGCTTGGTGC ATCCGTGGTGCTCACGGACCAGTCTAAGCTCTTGCCAACGCTGATGAAGA ACGCGCGCGCCAACGCTTGGGATCTCGAGGTTGGCCAATCTAGGCCACCC ACGGACGGT
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7779:201..3209-

>mRNA_H-canaliculatus_M_contigs7779.1.1 ID=mRNA_H-canaliculatus_M_contigs7779.1.1|Name=mRNA_H-canaliculatus_M_contigs7779.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=366bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7779:201..3209- (Hapterophycus canaliculatus Oshoro7m male)
ATGGCAATCGAAAAAGAGCTATCGGGGCTCAACCGCGAGCTTTCCATGTT
TCCTGAGCGAGCCTTCGACTTCAAGAATGCCGGAACTGTGATCATTCAAC
AGGATGTGGCCGACGTGGGGTCAATCGTGTGGGACGCGGAGATTATTCTC
GCCCACTACCTGGACCAGGCATACGGTTCCCGGCTGAGCGGAATGCGGGT
GTTGGAGCTCGGGGCTGGAACTGGACTTGCTGGCATCGTCGCGGCACGGC
TTGGTGCATCCGTGGTGCTCACGGACCAGTCTAAGCTCTTGCCAACGCTG
ATGAAGAACGCGCGCGCCAACGCTTGGGATCTCGAGGTTGGCCAATCTAG
GCCACCCACGGACGGT
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