mRNA_H-canaliculatus_M_contigs7755.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs7755.1.1
Unique NamemRNA_H-canaliculatus_M_contigs7755.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7755.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAY7_ECTSI)

HSP 1 Score: 303 bits (777), Expect = 5.620e-100
Identity = 147/178 (82.58%), Postives = 161/178 (90.45%), Query Frame = 1
Query:    1 PPWLAVTTFVHEVWLLLQHANILLNPLCQRLDRSYGVALLRRRLYWVIAGVLAAYWAREIISMLIASPYASPLTLKMVVISSVYHVGKILLISLDAKRQWSPTLGIMRLLMDHWHMSSLKDTLLCIKRMSLQAFDTVTHALIVRDMVRWDEESAERKLDLYETFVVVSLVWVIHAIAN 534
            P WL V TF HEVWLLLQHANILLNPLCQRLDRSYG+ LLRRRLYWVIAGVLAAYW+RE++SMLIASPYASPLTLKMV ISS+YHVGKI+LISLDA+R+WSPT+GIMRLLMDHWHMSS KD LLC+KRMSLQ FDT THALIVRDMVRWDEESAER   L+   +VVS+VW +HAIAN
Sbjct:  161 PAWLVVATFAHEVWLLLQHANILLNPLCQRLDRSYGIGLLRRRLYWVIAGVLAAYWSREVLSMLIASPYASPLTLKMVAISSLYHVGKIILISLDAQRRWSPTMGIMRLLMDHWHMSSFKDVLLCLKRMSLQGFDTATHALIVRDMVRWDEESAERTHGLHRKLIVVSVVWAMHAIAN 338          
BLAST of mRNA_H-canaliculatus_M_contigs7755.1.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPB7_9PHAE)

HSP 1 Score: 298 bits (763), Expect = 9.950e-98
Identity = 144/178 (80.90%), Postives = 160/178 (89.89%), Query Frame = 1
Query:    1 PPWLAVTTFVHEVWLLLQHANILLNPLCQRLDRSYGVALLRRRLYWVIAGVLAAYWAREIISMLIASPYASPLTLKMVVISSVYHVGKILLISLDAKRQWSPTLGIMRLLMDHWHMSSLKDTLLCIKRMSLQAFDTVTHALIVRDMVRWDEESAERKLDLYETFVVVSLVWVIHAIAN 534
            P WL V TFVHEVWLLLQHANILLNPLCQRLDRSYGV LLRRRLYWVIAGVL+AYW+RE++SMLIASPYASPLTLKMV  SS+YHVGKI+LIS DA+R+WSPT+GIMRLLMDHWHMSS KD LLC+KRMSLQ FDT THALIVRDMVRWDEESA R   L++  ++VS+VW +HAIAN
Sbjct:  161 PAWLVVATFVHEVWLLLQHANILLNPLCQRLDRSYGVGLLRRRLYWVIAGVLSAYWSREVLSMLIASPYASPLTLKMVATSSLYHVGKIILISRDAQRRWSPTMGIMRLLMDHWHMSSFKDALLCVKRMSLQGFDTATHALIVRDMVRWDEESAGRTHGLHQKLIIVSVVWAMHAIAN 338          
BLAST of mRNA_H-canaliculatus_M_contigs7755.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6P6_9STRA)

HSP 1 Score: 216 bits (550), Expect = 4.230e-67
Identity = 105/182 (57.69%), Postives = 134/182 (73.63%), Query Frame = 1
Query:   10 LAVTTFVHEVWLLLQHANILLNPLCQRLDRSYGVALLRRRLYWVIAGVLAAYWAREIISMLIASPYASPLTLKMVVISSVYHVGKILLISLDAKRQWSPTLGIMRLLMDHWHMSSLKDTLLCIKRMSLQA-------FDTVTHALIVRDMVRWDEESAERKLDLYETFVVVSLVWVIHAIAN 534
            L     VHEVW++LQH N+LLNPLCQRLDR YG++LL++R YWVIAGVL AYW REI+SML A PY +PLT  M+ +S VYH+GKI+L+S+DA+R WSPTLGIMRLL+DHWH+ SL D ++  KR +LQA       FD++TH LIVRD+V      +    +L    V+ SLVW +HA+AN
Sbjct:   40 LVALLLVHEVWVMLQHLNVLLNPLCQRLDRGYGISLLKKRQYWVIAGVLGAYWLREILSMLAALPYTAPLTSNMIAVSCVYHLGKIILVSIDAQRGWSPTLGIMRLLIDHWHLRSLADLMISAKRFALQARQLSHCAFDSLTHVLIVRDLVSGRMTRSVASAELERLVVITSLVWALHALAN 221          
BLAST of mRNA_H-canaliculatus_M_contigs7755.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KNY6_GUITH)

HSP 1 Score: 191 bits (486), Expect = 4.570e-56
Identity = 93/169 (55.03%), Postives = 122/169 (72.19%), Query Frame = 1
Query:   25 FVHEVWLLLQHANILLNPLCQRLDRSYGVALLRRRLYWVIAGVLAAYWAREIISMLIASPYASPLTLKMVVISSVYHVGKILLISLDAKRQWSPTLGIMRLLMDHWHMSSLKDTLLCIKRMSLQAFDTVTHALIVRDMVRWDEESAERKLDLYETFVVVSLVWVIHAIA 531
            F HEVW+ +QHAN+LLNP  QRLDR YG+ALLR+R YWVIAGVL+AYWARE++SM++   Y S  T  M+++S +YH+ KI L+SLDA R++SP LGIM LL+D WH+ SL D L+ +KR+ LQ FDT TH  IV DM+  D+E       L    V ++ VW +HA+A
Sbjct:  108 FAHEVWIFMQHANVLLNPYLQRLDRKYGIALLRKRFYWVIAGVLSAYWAREVLSMMLCYSYVSDATKTMIMMSCIYHIAKICLVSLDAARKFSPRLGIMSLLIDQWHLDSLVDALITLKRVLLQGFDTATHCKIVLDMISKDKE-------LLSFAVFIAAVWFVHALA 269          
BLAST of mRNA_H-canaliculatus_M_contigs7755.1.1 vs.
Match: CER3 (protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812V2L4_9DINO)

HSP 1 Score: 175 bits (443), Expect = 1.940e-47
Identity = 90/172 (52.33%), Postives = 119/172 (69.19%), Query Frame = 1
Query:   25 FVHEVWLLLQHANILLNPLCQRLDRSYGVALLRRRLYWVIAGVLAAYWAREIISMLIASPYASPLTLKMVVISSVYHVGKILLISLDAKRQWSPTLGIMRLLMDHWHMSSLKDTLLCIKRMSLQAFDTVTHALIVRDMVRWDEE--SAERKLDLYETFVVVSLVWVIHAIAN 534
            F+HE W++LQHAN+LLNP CQRLDR YGV++LR+  +WVIAGVL  YW+RE++SML+   + SP T   ++ SS YH+ K+  I  DA+RQWSP+LGIMRLL+DHWH  +L   L+   R  LQ  DT+TH +IVRDM+       +A R L L+  F    L+WV+HA  N
Sbjct:  331 FLHEAWVMLQHANVLLNPFCQRLDRRYGVSMLRKGQHWVIAGVLVMYWSREVVSMLLCLAFTSPRTQLAILASSGYHLVKMHSICWDAQRQWSPSLGIMRLLIDHWHFDTLAQRLVSALRFFLQGSDTLTHIMIVRDMLTRSGSPITAGRLLPLHGLF----LLWVVHAALN 498          
BLAST of mRNA_H-canaliculatus_M_contigs7755.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812Q1W1_9DINO)

HSP 1 Score: 163 bits (412), Expect = 8.370e-45
Identity = 82/175 (46.86%), Postives = 112/175 (64.00%), Query Frame = 1
Query:   10 LAVTTFVHEVWLLLQHANILLNPLCQRLDRSYGVALLRRRLYWVIAGVLAAYWAREIISMLIASPYASPLTLKMVVISSVYHVGKILLISLDAKRQWSPTLGIMRLLMDHWHMSSLKDTLLCIKRMSLQAFDTVTHALIVRDMVRWDEESAERKLDLYETFVVVSLVWVIHAIAN 534
            LA    +HE W+ LQH N+LLNP CQRLDR+YG+++L++  +WVIA VL  YWARE+ SML+  PY S  +   V +S++YH  K+  I LDA R WSPTLGIM+LL+DHWH  +L   L+ + R  LQ +DT+ H  IV D++            L+  F    LVW++HA+ N
Sbjct:   53 LAALLLLHEAWVTLQHGNVLLNPFCQRLDRNYGISMLQKGQHWVIASVLVMYWAREVASMLLCLPYISVYSQIAVFVSAIYHTVKMFNICLDAHRCWSPTLGIMKLLIDHWHFHTLGTQLVSLLRFVLQGYDTMVHVFIVSDLIHHGGLGTGYVWWLHVLF----LVWLLHAVLN 223          
BLAST of mRNA_H-canaliculatus_M_contigs7755.1.1 vs.
Match: Hypothetical (protein n=2 Tax=unclassified Symbiodinium TaxID=279888 RepID=A0A812Z067_9DINO)

HSP 1 Score: 160 bits (404), Expect = 4.680e-43
Identity = 79/169 (46.75%), Postives = 109/169 (64.50%), Query Frame = 1
Query:   28 VHEVWLLLQHANILLNPLCQRLDRSYGVALLRRRLYWVIAGVLAAYWAREIISMLIASPYASPLTLKMVVISSVYHVGKILLISLDAKRQWSPTLGIMRLLMDHWHMSSLKDTLLCIKRMSLQAFDTVTHALIVRDMVRWDEESAERKLDLYETFVVVSLVWVIHAIAN 534
            +HE W+ LQH N+LLNP CQRLDR YG+++L++  +WVIA VL  YWARE+ SML+  PY +  +   V +S++YH  K+  I LDA R WSPTLGIM+LL+DHWH  +L   L+ + R  LQ +DT+ H  IV D++            L+  F    LVW++HA+ N
Sbjct:   61 LHEAWVTLQHGNVLLNPFCQRLDRKYGISMLQKGQHWVIASVLVMYWAREVASMLLCLPYITVYSQIAVFVSAIYHTVKMFNICLDAHRCWSPTLGIMKLLIDHWHFYTLGTQLVSLLRFLLQGYDTMVHVFIVSDLIHHGGLGTSYVWWLHVLF----LVWLLHAVLN 225          
BLAST of mRNA_H-canaliculatus_M_contigs7755.1.1 vs.
Match: Caroteno-chlorophyll (a-c-binding protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9D0R3_SYMMI)

HSP 1 Score: 162 bits (409), Expect = 7.010e-43
Identity = 81/175 (46.29%), Postives = 111/175 (63.43%), Query Frame = 1
Query:   10 LAVTTFVHEVWLLLQHANILLNPLCQRLDRSYGVALLRRRLYWVIAGVLAAYWAREIISMLIASPYASPLTLKMVVISSVYHVGKILLISLDAKRQWSPTLGIMRLLMDHWHMSSLKDTLLCIKRMSLQAFDTVTHALIVRDMVRWDEESAERKLDLYETFVVVSLVWVIHAIAN 534
            LA    +HE W+ +QH N+LLNP CQRLDR YG+++L++  +WVIA VL  YWARE+ SML+  PY S  +   V +S++YH  K+  I LDA R WSPTLGIM+LL+DHWH  +L   L+ + R  LQ +DT+ H  IV D++            L+  F    LVW++HA+ N
Sbjct:   53 LAALLLLHEAWVTMQHGNVLLNPFCQRLDRKYGISMLQKGQHWVIASVLVMYWAREVASMLLCLPYISVYSQIAVFVSAIYHTVKMFNICLDAHRCWSPTLGIMKLLIDHWHFHTLGTQLVSLLRFVLQGYDTMVHVFIVSDLIHHGGLGTGYVWWLHVLF----LVWLLHAVLN 223          
BLAST of mRNA_H-canaliculatus_M_contigs7755.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J6G4_GUITC)

HSP 1 Score: 143 bits (361), Expect = 2.250e-36
Identity = 80/177 (45.20%), Postives = 108/177 (61.02%), Query Frame = 1
Query:   25 FVHEVWLLLQHANILLNPLCQRLDRSYGVALLRRRLYWVIAGVLAAYWAREIISMLIASPYASPLTLKMVVISSVYHVGKILL-ISLDAKRQWSPTLGIMRLLMDHWHMSSLK-------DTLLCIKRMSLQAFDTVTHALIVRDMVRWDEESAERKLDLYETFVVVSLVWVIHAIA 531
            F HEVW+ +QHAN+LLNP  QRLDR YG+ALLR+R YWVIAGVL+AYWARE++SM++   Y S  T  M+++S +YH+ K++     D        LGIM LL+D WH+ SL        D L+ +KR+ LQ         IV DM+  D+E       L    V ++ VW +HA+A
Sbjct:  100 FAHEVWIFMQHANVLLNPYLQRLDRKYGIALLRKRFYWVIAGVLSAYWAREVLSMMLCYSYVSDATKTMIMMSCIYHIAKVIKSFDSDEFNDTLQRLGIMSLLIDQWHLDSLVVIHSLDVDALITLKRVLLQ---------IVLDMISKDKE-------LLSFAVFIAAVWFVHALA 260          
BLAST of mRNA_H-canaliculatus_M_contigs7755.1.1 vs.
Match: Hypothetical (protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3TV35_9STRA)

HSP 1 Score: 141 bits (356), Expect = 1.070e-35
Identity = 71/176 (40.34%), Postives = 107/176 (60.80%), Query Frame = 1
Query:    7 WLAVTTFVHEVWLLLQHANILLNPLCQRLDRSYGVALLRRRLYWVIAGVLAAYWAREIISMLIASPYASPLTLKMVVISSVYHVGKILLISLDAKRQWSPTLGIMRLLMDHWHMSSLKDTLLCIKRMSLQAFDTVTHALIVRDMVRWDEESAERKLDLYETFVVVSLVWVIHAIAN 534
            WLA     HE W+ LQH+N+L NPLCQ LDR YG+ALLR   +W IAG L+AYW RE + M + +P+    T  +V+ S VYH  K   + LDA R++SP  GIMR+++D +H+ +  + +L   R+ LQ  DT  HA+I++ +  +   ++E  + +      +S +W+ HA  N
Sbjct:   62 WLATLLLAHEYWVYLQHSNVLANPLCQHLDRQYGIALLRSNQHWAIAGTLSAYWCRESMCMFLCTPFLPRHTQYLVLYSLVYHTIKSRGVRLDAIRRYSPQFGIMRIVIDKFHLHTTAEAILTAVRLLLQGGDTFIHAMIIKGLFVYLSSTSE--MSMLPMIHWLSFIWITHAAMN 235          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7755.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
Uncharacterized5.620e-10082.58protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized9.950e-9880.90protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 131... [more]
Uncharacterized4.230e-6757.69protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Hypothetical4.570e-5655.03protein n=1 Tax=Guillardia theta TaxID=55529 RepID... [more]
CER31.940e-4752.33protein n=1 Tax=Symbiodinium natans TaxID=878477 R... [more]
Hypothetical8.370e-4546.86protein n=1 Tax=Symbiodinium necroappetens TaxID=1... [more]
Hypothetical4.680e-4346.75protein n=2 Tax=unclassified Symbiodinium TaxID=27... [more]
Caroteno-chlorophyll7.010e-4346.29a-c-binding protein n=1 Tax=Symbiodinium microadri... [more]
Uncharacterized2.250e-3645.20protein n=1 Tax=Guillardia theta (strain CCMP2712)... [more]
Hypothetical1.070e-3540.34protein n=2 Tax=Ditylum brightwellii TaxID=49249 R... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs7755contigH-canaliculatus_M_contigs7755:2430..3941 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LAY7
PFAMsFMO-like,Pkinase
Model size534
Max annot lvl2759|Eukaryota
KEGG rclassRC02233
KEGG koko:K00485,ko:K14003
KEGG ReactionR08266
KEGG Pathwayko00982,ko01120,ko04141,map00982,map01120,map04141
Hectar predicted targeting categorysignal anchor
Exons3
Evalue9.22e-101
EggNOG OGsCOG2072@1|root,KOG1399@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-27_005950.1
EC1.14.13.8
DescriptionN,N-dimethylaniline monooxygenase activity
Cds size534
COG categoryP
BRITEko00000,ko00001,ko01000,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854112.7033587-CDS-H-canaliculatus_M_contigs7755:2429..25671696854112.7033587-CDS-H-canaliculatus_M_contigs7755:2429..2567Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7755 2430..2567 -
1696854112.7195396-CDS-H-canaliculatus_M_contigs7755:3044..33231696854112.7195396-CDS-H-canaliculatus_M_contigs7755:3044..3323Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7755 3045..3323 -
1696854112.7350137-CDS-H-canaliculatus_M_contigs7755:3824..39411696854112.7350137-CDS-H-canaliculatus_M_contigs7755:3824..3941Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7755 3825..3941 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs7755.1.1prot_H-canaliculatus_M_contigs7755.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs7755 2430..3941 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs7755.1.1

>prot_H-canaliculatus_M_contigs7755.1.1 ID=prot_H-canaliculatus_M_contigs7755.1.1|Name=mRNA_H-canaliculatus_M_contigs7755.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=178bp
PPWLAVTTFVHEVWLLLQHANILLNPLCQRLDRSYGVALLRRRLYWVIAG
VLAAYWAREIISMLIASPYASPLTLKMVVISSVYHVGKILLISLDAKRQW
SPTLGIMRLLMDHWHMSSLKDTLLCIKRMSLQAFDTVTHALIVRDMVRWD
EESAERKLDLYETFVVVSLVWVIHAIAN
back to top

mRNA from alignment at H-canaliculatus_M_contigs7755:2430..3941-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs7755.1.1 ID=mRNA_H-canaliculatus_M_contigs7755.1.1|Name=mRNA_H-canaliculatus_M_contigs7755.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=1512bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7755:2430..3941- (Hapterophycus canaliculatus Oshoro7m male)
CCGCCTTGGCTGGCAGTGACGACTTTCGTGCACGAGGTGTGGCTCTTGCT ACAGCACGCCAACATCCTGCTGAATCCGCTCTGTCAGAGGTTGGACAGGA GCTACGGCGTGGCGCTGGTGAGAGAGCGACACCTTATCTCGTGTATGTCA TGCATTCTTGTGGAGATCTTTGTCTCGCGGAGAATATCTGTGTTATTTAG ACTCCTCTTTTGGAGGCCACTTAAGCTTTTGCGTGAGTACGGAGGTGCAC CACATGGTCACCGCCTTCATTTCCGGAACTCTTCGACAACCGTGGCGTGA TATCGGAGCTGACGCGACACACGGGAAATTAGGAGCGCAGAGGGAACACA GCAGTACTTTCGCCACGCAGGTGTCAGCAGCGCCGGCTGCAGGCGTCCCA TAGACGAAAATACACACGACGCCCAAGTCTGTTGGCCGTCACCCGTGCTG CTTTCGTGACGCTGCGTGTGTGCCGAACGCAGCTGCTGTGGCCTACGCGG CATCTGTGCGGTCGTCACACCCAACATTTCTGACATCCCCGTTGTTTTGT GCTCAAGGATCACATGCCTGCCCCGTGTGCTTCCACCCGTTTCTTCTCTC GTGTCTCTCAACCCACAGCTGAGGCGAAGGTTGTACTGGGTGATCGCTGG TGTGTTGGCAGCGTACTGGGCGAGGGAGATCATTTCTATGTTGATCGCCT CGCCCTACGCCTCTCCCCTCACGCTGAAGATGGTGGTCATCAGCTCGGTG TATCACGTTGGCAAGATTTTGCTTATCTCTCTGGACGCCAAGCGCCAGTG GTCCCCTACGCTAGGGATAATGCGGTTGCTCATGGATCACTGGCACATGT CTTCGTTGAAGGACACCCTGCTCTGCATCAAAAGGATGTCGCTGCAGGTG AGCTGGGTTTGACGGCATGTTGGTTCGAGGCTTGGGGTAAATGAAGGCCT CCACGAAAGTGGGGCCGTACGTCGGCAACGCGGGCCTAGTCGAAAGAAGC CCGACATCCTGCGCAGTATTTATTCCTACATCATTATTACCATGGGTCTG ATGTTACCAGGGAGATTCGTCTGGTGGGTACATGGGCGGCTGCCTTAGTG ATTCGTCTTCCTTTGACGTTGGGTACCGAGATATGGTGAACCACACGTAC AGTAGGACACGACGTGCGAAGGAGCAAACCGTCTCTTTTTTTTTCTGAAG TAAAGCTAGCTTTGGCCCGACTTTGTCCGCAAGCTTTCACGCTGCACTAC CCATGATAATGCATGTGCACTTTCACCGAGGAGCAGCACTCGTCGCATAG TATCTAGCAGATCTTTTCCTCACGACGCGATCCTCCGTTTTCGTGTTTGG TCTTGGGTACATCTGTTCGTCGAGGCGTTTGACACGGTCACGCACGCTCT GATCGTCCGCGACATGGTGCGCTGGGACGAGGAGTCGGCGGAGAGAAAGC TTGACCTTTACGAAACATTTGTGGTCGTTTCTCTTGTCTGGGTGATTCAC GCCATCGCAAAC
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7755:2430..3941-

>mRNA_H-canaliculatus_M_contigs7755.1.1 ID=mRNA_H-canaliculatus_M_contigs7755.1.1|Name=mRNA_H-canaliculatus_M_contigs7755.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=534bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7755:2430..3941- (Hapterophycus canaliculatus Oshoro7m male)
CCGCCTTGGCTGGCAGTGACGACTTTCGTGCACGAGGTGTGGCTCTTGCT
ACAGCACGCCAACATCCTGCTGAATCCGCTCTGTCAGAGGTTGGACAGGA
GCTACGGCGTGGCGCTGCTGAGGCGAAGGTTGTACTGGGTGATCGCTGGT
GTGTTGGCAGCGTACTGGGCGAGGGAGATCATTTCTATGTTGATCGCCTC
GCCCTACGCCTCTCCCCTCACGCTGAAGATGGTGGTCATCAGCTCGGTGT
ATCACGTTGGCAAGATTTTGCTTATCTCTCTGGACGCCAAGCGCCAGTGG
TCCCCTACGCTAGGGATAATGCGGTTGCTCATGGATCACTGGCACATGTC
TTCGTTGAAGGACACCCTGCTCTGCATCAAAAGGATGTCGCTGCAGGCGT
TTGACACGGTCACGCACGCTCTGATCGTCCGCGACATGGTGCGCTGGGAC
GAGGAGTCGGCGGAGAGAAAGCTTGACCTTTACGAAACATTTGTGGTCGT
TTCTCTTGTCTGGGTGATTCACGCCATCGCAAAC
back to top