mRNA_H-canaliculatus_M_contigs7671.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
|
Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7671.1.1 vs.
Match: ABC (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDN6_9PHAE) HSP 1 Score: 323 bits (827), Expect = 2.320e-99 Identity = 159/181 (87.85%), Postives = 170/181 (93.92%), Query Frame = 1
Query: 1 SMVPAVWYFLYLMSFYMKTSRETKRLEAVTRSPVYSQLSETLDGLVTIRAFSTQHRFLNAFTERVDLNTRAYFAWVFTARWLGFRMDMVVIIVLIASCFFSVAVNEYSDSVDAGLLGAALVYVIQLGGLFQWSVRQSAEVENQMVSAERILGYCRVAQEASLDSEPGCKPEEDWPATGGIE 543
SMVPA+WYFLYLMSFYMKTSRE KRLEAVTRSPVYSQLSETLDGLVTIRAF Q+RFL+ FTERV++NTRAYFAW++TARWLGFRMDMVVIIVL ASCFFSVA NEYSDSVDAGLLGAALVYV+QLGGLFQWSVRQSAEVENQMVSAER+LGYCRV QEASL+SEPGCKP + WPA G IE
Sbjct: 1019 SMVPALWYFLYLMSFYMKTSREAKRLEAVTRSPVYSQLSETLDGLVTIRAFGNQNRFLSQFTERVNMNTRAYFAWMYTARWLGFRMDMVVIIVLAASCFFSVAANEYSDSVDAGLLGAALVYVLQLGGLFQWSVRQSAEVENQMVSAERVLGYCRVPQEASLESEPGCKPADGWPAKGDIE 1199
BLAST of mRNA_H-canaliculatus_M_contigs7671.1.1 vs.
Match: Multidrug (resistance-associated protein-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW4_ECTSI) HSP 1 Score: 306 bits (785), Expect = 1.350e-93 Identity = 150/181 (82.87%), Postives = 165/181 (91.16%), Query Frame = 1
Query: 1 SMVPAVWYFLYLMSFYMKTSRETKRLEAVTRSPVYSQLSETLDGLVTIRAFSTQHRFLNAFTERVDLNTRAYFAWVFTARWLGFRMDMVVIIVLIASCFFSVAVNEYSDSVDAGLLGAALVYVIQLGGLFQWSVRQSAEVENQMVSAERILGYCRVAQEASLDSEPGCKPEEDWPATGGIE 543
S++PA+WYF++LM FY+KTSRE KRLEAVTRSPVYSQLSETLDGLVTIRAF QHRFL FTERV+LNTRAYFAWV+TARWLGFRMDMVVIIVL ASCFFSVAVNEYS SVDAGLLGAALVYV+QLGGLFQW+VRQ+AEVENQMVS ER+L YCRV QEASL+SEPG +P + WPA G IE
Sbjct: 999 SLLPAMWYFVHLMGFYLKTSREAKRLEAVTRSPVYSQLSETLDGLVTIRAFGKQHRFLGQFTERVNLNTRAYFAWVYTARWLGFRMDMVVIIVLTASCFFSVAVNEYSSSVDAGLLGAALVYVLQLGGLFQWAVRQAAEVENQMVSVERVLSYCRVPQEASLESEPGYQPSDGWPAKGNIE 1179
BLAST of mRNA_H-canaliculatus_M_contigs7671.1.1 vs.
Match: ABC (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL0_9PHAE) HSP 1 Score: 305 bits (782), Expect = 2.180e-93 Identity = 148/181 (81.77%), Postives = 167/181 (92.27%), Query Frame = 1
Query: 1 SMVPAVWYFLYLMSFYMKTSRETKRLEAVTRSPVYSQLSETLDGLVTIRAFSTQHRFLNAFTERVDLNTRAYFAWVFTARWLGFRMDMVVIIVLIASCFFSVAVNEYSDSVDAGLLGAALVYVIQLGGLFQWSVRQSAEVENQMVSAERILGYCRVAQEASLDSEPGCKPEEDWPATGGIE 543
S++PA+W+F+YLM FY+KTSRE KRLEAVTRSPVYSQLSETLDGLVTIRAF QH FL+ FTERV+LNTRAYFAWV+TARWLGFRMDMVVIIVL ASCFFSVAVNEYS+S+DAGLLGAALVYV+QLGGLFQW+VRQ+AEVENQMVSAER+L YCRV QEASL+S+PG KP + WP+ G IE
Sbjct: 918 SLLPALWFFIYLMGFYLKTSREAKRLEAVTRSPVYSQLSETLDGLVTIRAFGKQHLFLSQFTERVNLNTRAYFAWVYTARWLGFRMDMVVIIVLAASCFFSVAVNEYSNSIDAGLLGAALVYVLQLGGLFQWAVRQAAEVENQMVSAERVLSYCRVPQEASLESDPGYKPADGWPSKGNIE 1098
BLAST of mRNA_H-canaliculatus_M_contigs7671.1.1 vs.
Match: Multidrug (resistance-associated protein-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW3_ECTSI) HSP 1 Score: 300 bits (767), Expect = 3.570e-91 Identity = 148/181 (81.77%), Postives = 163/181 (90.06%), Query Frame = 1
Query: 1 SMVPAVWYFLYLMSFYMKTSRETKRLEAVTRSPVYSQLSETLDGLVTIRAFSTQHRFLNAFTERVDLNTRAYFAWVFTARWLGFRMDMVVIIVLIASCFFSVAVNEYSDSVDAGLLGAALVYVIQLGGLFQWSVRQSAEVENQMVSAERILGYCRVAQEASLDSEPGCKPEEDWPATGGIE 543
S++PA+WYF++LM FYMKTSRE KRLEAVTRSPVYSQLSETLDGLVTIRAF QHRFL FTE V++NTRAYFAWV+TARWLGFRMDMVVIIVL ASCFFSVAVNEYS SVDAGLLGAA+VYV+QLGGLFQW+VRQ+AEVENQMVSAER+L YCRV QEA+L SEP KP + WPA G IE
Sbjct: 968 SLLPAMWYFVHLMGFYMKTSREAKRLEAVTRSPVYSQLSETLDGLVTIRAFGKQHRFLGQFTEVVNMNTRAYFAWVYTARWLGFRMDMVVIIVLTASCFFSVAVNEYSSSVDAGLLGAAMVYVLQLGGLFQWAVRQAAEVENQMVSAERVLSYCRVPQEAALASEPVYKPADGWPAEGNIE 1148
BLAST of mRNA_H-canaliculatus_M_contigs7671.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW6_ECTSI) HSP 1 Score: 199 bits (505), Expect = 1.120e-55 Identity = 100/111 (90.09%), Postives = 105/111 (94.59%), Query Frame = 1
Query: 1 SMVPAVWYFLYLMSFYMKTSRETKRLEAVTRSPVYSQLSETLDGLVTIRAFSTQHRFLNAFTERVDLNTRAYFAWVFTARWLGFRMDMVVIIVLIASCFFSVAVNEYSDSV 333
SMVPA+WYFLYLMSFYMKTSRE KRLEAVTRSPVYSQLSETLDGLVTIRAF Q RFL+ FTERV++NTRAYFAWV+TARWLGFRMDMVVIIVL ASCFFSVAVNEYSDSV
Sbjct: 1210 SMVPAMWYFLYLMSFYMKTSREAKRLEAVTRSPVYSQLSETLDGLVTIRAFGKQDRFLSQFTERVNMNTRAYFAWVYTARWLGFRMDMVVIIVLTASCFFSVAVNEYSDSV 1320
BLAST of mRNA_H-canaliculatus_M_contigs7671.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMC7_9STRA) HSP 1 Score: 176 bits (447), Expect = 7.190e-48 Identity = 99/211 (46.92%), Postives = 129/211 (61.14%), Query Frame = 1
Query: 1 SMVPAVWYFLYLMSFYMKTSRE--TKRLEAVTR---------SPVYSQ-------------------LSETLDGLVTIRAFSTQHRFLNAFTERVDLNTRAYFAWVFTARWLGFRMDMVVIIVLIASCFFSVAVNEYSDSVDAGLLGAALVYVIQLGGLFQWSVRQSAEVENQMVSAERILGYCRVAQEASLDSEPGCKPEEDWPATGGIE 543
S++PA F Y+ Y+ TSRE +K EA + +P+ S L+ETLDGL T+RAF Q RF F D N++AY+A++FT RWLG +DMVV+++L A+ FFSVAV+E+ ++ G LGAAL YVIQLGGLFQW+VRQSAEVENQ++S ERIL YC V QEA S G P +WPA G ++
Sbjct: 1258 SLLPAGVGFRYMQQLYLSTSREEDSKEFEATAKESAKRLRLPTPIASSGLEARVASGLEAPGRLWPCLAETLDGLATVRAFGAQERFQKLFRAYQDENSKAYYAFLFTGRWLGLWLDMVVLVLLAATAFFSVAVDEFGSGINPGYLGAALAYVIQLGGLFQWAVRQSAEVENQIISVERILQYCEVEQEAPWFSPEGQGPPPEWPAHGELD 1468
BLAST of mRNA_H-canaliculatus_M_contigs7671.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YEW1_9STRA) HSP 1 Score: 171 bits (432), Expect = 1.400e-46 Identity = 87/182 (47.80%), Postives = 126/182 (69.23%), Query Frame = 1
Query: 4 MVPAVWYFLYLMSFYMKTSRETKRLEAVTRSPVYSQLSETLDGLVTIRAFSTQHRFLNAFTERVDLNTRAYFAWVFTARWLGFRMDMVVIIVLIASCFFSVAVNEYSD--SVDAGLLGAALVYVIQLGGLFQWSVRQSAEVENQMVSAERILGYCRVAQEASLDSEPGCKPEEDWPATGGIE 543
M+P +YF+ L ++++SR KR+EA+TRSPV+S ++E L GL IRAF Q + F+ERV+ NTRAYF+++ RW GF++D++V+ +L A+ +FSV + +VD LLG ALVY++QL GLFQW VRQSAEVENQM+S ER++ Y ++ QEA D E + + WP +G +E
Sbjct: 160 MLPLGFYFVRLRKTFLRSSRPIKRVEALTRSPVFSYIAEMLQGLPVIRAFQLQDEINSTFSERVNANTRAYFSFIGLNRWFGFQLDLIVVTLLAAAAYFSVVLKHVDTGYTVDGALLGTALVYILQLAGLFQWMVRQSAEVENQMISTERLVAYTKLPQEAG-DPE-AAEQAKAWPTSGDVE 339
BLAST of mRNA_H-canaliculatus_M_contigs7671.1.1 vs.
Match: ABC (transmembrane type-1 domain-containing protein (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6ZNA2_9EUPU) HSP 1 Score: 155 bits (392), Expect = 1.550e-44 Identity = 79/178 (44.38%), Postives = 117/178 (65.73%), Query Frame = 1
Query: 7 VPAVWYFLYLMSFYMKTSRETKRLEAVTRSPVYSQLSETLDGLVTIRAFSTQHRFLNAFTERVDLNTRAYFAWVFTARWLGFRMDMVVIIVLIASCFFSVAVNEYSDSVDAGLLGAALVYVIQLGGLFQWSVRQSAEVENQMVSAERILGYCRVAQEASLDSEPGCKPEEDWPATGGI 540
VP V F+ + +Y+KTSR KRLE+ +RSPV+S LS TL G+ TIR+ + +F+ F D ++ A+F ++ T+RWL R+D + + + A SV +D+++AGL+G ++ Y + L G+FQW+VRQSAEVENQM+S ER+L Y ++ QEA L+S+P KP WP G I
Sbjct: 30 VPLVILFILVRKYYLKTSRSIKRLESTSRSPVFSYLSATLQGVHTIRSMRMEEKFVEEFDAYQDKHSEAWFLFLATSRWLAVRLDWLCAMFVTAVTVCSVLA---ADTMNAGLVGLSITYTMTLMGMFQWAVRQSAEVENQMISVERVLEYSQLTQEAELESDPDKKPPPTWPQNGAI 204
BLAST of mRNA_H-canaliculatus_M_contigs7671.1.1 vs.
Match: ATP-binding (cassette sub-family C member 4-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88CF6D) HSP 1 Score: 164 bits (416), Expect = 1.040e-43 Identity = 83/172 (48.26%), Postives = 116/172 (67.44%), Query Frame = 1
Query: 25 FLYLMSFYMKTSRETKRLEAVTRSPVYSQLSETLDGLVTIRAFSTQHRFLNAFTERVDLNTRAYFAWVFTARWLGFRMDMVVIIVLIASCFFSVAVNEYSDSVDAGLLGAALVYVIQLGGLFQWSVRQSAEVENQMVSAERILGYCRVAQEASLDSEPGCKPEEDWPATGGI 540
F+ + +Y++TSR KRLEA RSPV+S LS +L GL TIRAF Q +F+ F DL+T A+F ++ T+RWL R+D + + + A SV +E ++DAGL+G ++ Y + L GLFQW VRQSAEVENQM+S ER+L Y +++ EA+L+S+P KP DWP G I
Sbjct: 914 FIVVRQYYLRTSRSVKRLEATCRSPVFSHLSASLQGLHTIRAFGMQSKFMQEFDAHQDLHTEAWFLFLSTSRWLAVRLDWLCVTFVTAVTMCSVIASE---NLDAGLVGLSVTYAMTLMGLFQWGVRQSAEVENQMISVERVLEYSKISPEAALESDPEHKPPSDWPKHGII 1082
BLAST of mRNA_H-canaliculatus_M_contigs7671.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3RN07_EMIHU) HSP 1 Score: 164 bits (415), Expect = 1.250e-43 Identity = 91/179 (50.84%), Postives = 120/179 (67.04%), Query Frame = 1
Query: 10 PAVWYFLYLMSFYMKTSRETKRLEAVTRSPVYSQLSETLDGLVTIRAFSTQHRFLNAFTERVDLNTRAYFAWVFTARWLGFRMDMVVIIVLIASCFFSVAVNEYSDSV--DAGLLGAALVYVIQLGGLFQWSVRQSAEVENQMVSAERILGYCRVAQEASLDSEPGCKPEEDWPATGGI 540
P + YF +L FY+ +RE KRL+AV+RSP+++ LSE L GL TIRAF + L F D N+RA+F +V RWLGFR+DM+ +L SCF +V Y +V +AGL+GAAL+YVIQL GLFQW+VRQ+AE+ENQMVS ER+ Y + QEA+L ++ PE WP G I
Sbjct: 484 PLLCYFRWLRRFYLLGAREIKRLDAVSRSPMFALLSECLGGLATIRAFRIERDLLARFHTLHDANSRAFFHFVAGGRWLGFRLDMMSFALLATSCFAAVLSKAYGLAVSDNAGLVGAALLYVIQLAGLFQWAVRQTAELENQMVSVERLAAYHSLPQEAALVTDAPPPPE--WPHAGEI 660 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7671.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7671.1.1 >prot_H-canaliculatus_M_contigs7671.1.1 ID=prot_H-canaliculatus_M_contigs7671.1.1|Name=mRNA_H-canaliculatus_M_contigs7671.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=180bp MVPAVWYFLYLMSFYMKTSRETKRLEAVTRSPVYSQLSETLDGLVTIRAFback to top mRNA from alignment at H-canaliculatus_M_contigs7671:12..2085- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7671.1.1 ID=mRNA_H-canaliculatus_M_contigs7671.1.1|Name=mRNA_H-canaliculatus_M_contigs7671.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=2074bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7671:12..2085- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7671:12..2085- >mRNA_H-canaliculatus_M_contigs7671.1.1 ID=mRNA_H-canaliculatus_M_contigs7671.1.1|Name=mRNA_H-canaliculatus_M_contigs7671.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=540bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7671:12..2085- (Hapterophycus canaliculatus Oshoro7m male)back to top |