mRNA_H-canaliculatus_M_contigs76458.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs76458.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K677_9PHAE) HSP 1 Score: 127 bits (320), Expect = 7.780e-37 Identity = 57/66 (86.36%), Postives = 62/66 (93.94%), Query Frame = 1
Query: 7 HYGWAFAAPDDPPFVPPGGYGSVPAGGGAIPDPLHGFKTVREIYEMAVGEGALKKFTVPILWDEKV 204
HYGWAFA+PDDPPFVPPGGYGSVP+G GAIPDPLHGFKTVR+IY+MAVG G L K+TVPILWDEKV
Sbjct: 20 HYGWAFASPDDPPFVPPGGYGSVPSGPGAIPDPLHGFKTVRQIYDMAVGPGKLSKYTVPILWDEKV 85
BLAST of mRNA_H-canaliculatus_M_contigs76458.1.1 vs.
Match: Putative (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPZ8_ECTSI) HSP 1 Score: 123 bits (308), Expect = 2.130e-32 Identity = 54/65 (83.08%), Postives = 60/65 (92.31%), Query Frame = 1
Query: 7 HYGWAFAAPDDPPFVPPGGYGSVPAGGGAIPDPLHGFKTVREIYEMAVGEGALKKFTVPILWDEK 201
HYGWAFA+PDDPPFVPPGGYGSVP+G GAIPDPLH FKTVR+IY+MAVG G + K+TVPILWDEK
Sbjct: 91 HYGWAFASPDDPPFVPPGGYGSVPSGPGAIPDPLHSFKTVRQIYDMAVGPGKMSKYTVPILWDEK 155
BLAST of mRNA_H-canaliculatus_M_contigs76458.1.1 vs.
Match: GST (C-terminal domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L987_9EUKA) HSP 1 Score: 62.0 bits (149), Expect = 1.130e-9 Identity = 31/67 (46.27%), Postives = 44/67 (65.67%), Query Frame = 1
Query: 1 NSHYGWAFAAPDDPPFVPPGGYGSVPAGGGAIPDPLHGFKTVREIYEMAVGEGALKKFTVPILWDEK 201
++H GW F P DPP PGG+GS G IPD ++G +T+RE+Y++A G K+TVP+LW +K
Sbjct: 66 DTHTGWIFKDPSDPPVSNPGGHGSFNCEG-CIPDTVNGARTIRELYDIANDTGG--KYTVPLLWCKK 129
BLAST of mRNA_H-canaliculatus_M_contigs76458.1.1 vs.
Match: GST (C-terminal domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836BDT9_9CHLO) HSP 1 Score: 61.6 bits (148), Expect = 1.740e-9 Identity = 30/67 (44.78%), Postives = 43/67 (64.18%), Query Frame = 1
Query: 1 NSHYGWAFAAPDDPPFVPPGGYGSVPAGGGAIPDPLHGFKTVREIYEMAVGEGALKKFTVPILWDEK 201
++H GWAF P DPP G G+ P G +PD ++G K VR++YEMA G+ F+VP+LWD++
Sbjct: 76 DTHCGWAFVKPTDPPLAATNGKGAFPCTG-CVPDTVNGVKFVRDLYEMAGGKKVT--FSVPVLWDKQ 139
BLAST of mRNA_H-canaliculatus_M_contigs76458.1.1 vs.
Match: GST (C-terminal domain-containing protein n=2 Tax=Chlamydomonas TaxID=3052 RepID=A0A835TM32_CHLIN) HSP 1 Score: 60.8 bits (146), Expect = 3.260e-9 Identity = 33/68 (48.53%), Postives = 43/68 (63.24%), Query Frame = 1
Query: 1 NSHYGWAFAAPDDPPFVPPGGYGSVPAGGGAIPDPLHGFKTVREIYEMAVGEGALK-KFTVPILWDEK 201
++H GW FA P DPP G GS P G PD ++G + VR++YEMA GA K F+VP+LWD+K
Sbjct: 76 DTHCGWVFAKPTDPPLAATNGKGSFPCTG-CTPDTVNGVRFVRDLYEMA---GAKKVTFSVPVLWDKK 139
BLAST of mRNA_H-canaliculatus_M_contigs76458.1.1 vs.
Match: GST (C-terminal domain-containing protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CAT8_PYTIN) HSP 1 Score: 58.2 bits (139), Expect = 2.870e-8 Identity = 30/68 (44.12%), Postives = 42/68 (61.76%), Query Frame = 1
Query: 1 NSHYGWAFAAPDDPPFVP-PGGYGSVPAGGGAIPDPLHGFKTVREIYEMAVGEGALKKFTVPILWDEK 201
++H GWA P PF+ P G G + G PDP+HG K VR++YE A+G +F+VP+LWD+K
Sbjct: 92 DTHTGWAIVDPKATPFLAGPTGVGQY-SSEGCSPDPVHGAKFVRDLYERALGPNPGVRFSVPLLWDKK 158
BLAST of mRNA_H-canaliculatus_M_contigs76458.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FFY0_PYTOL) HSP 1 Score: 53.1 bits (126), Expect = 1.670e-6 Identity = 28/67 (41.79%), Postives = 40/67 (59.70%), Query Frame = 1
Query: 1 NSHYGWAFAAPDDPPFVPPGGYGSVPAGGGAIPDPLHGFKTVREIYEMAVGEGALKKFTVPILWDEK 201
++H GWAF P PF G G + G PDP+HG K VR++YE + ++ F+VP+LWD+K
Sbjct: 69 DTHKGWAFFDPKTTPFAT-GPNGEQLSTEGCTPDPIHGAKYVRDLYERVTKDPKVR-FSVPLLWDKK 133
BLAST of mRNA_H-canaliculatus_M_contigs76458.1.1 vs.
Match: Hypothetical (protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4PDK7_HEMAN) HSP 1 Score: 52.8 bits (125), Expect = 2.410e-6 Identity = 28/67 (41.79%), Postives = 41/67 (61.19%), Query Frame = 1
Query: 1 NSHYGWAFAAPDDPPFVPPGGYGSVPAGGGAIPDPLHGFKTVREIYEMAVGEGALKKFTVPILWDEK 201
++H GW F P DPP G+G+ G IPD ++ VR++YE+A G KK++VP+LWD+K
Sbjct: 173 DTHAGWIFKDPKDPPVPNQLGFGAFDCEG-CIPDFVNNCTFVRDVYELAKDTG--KKYSVPVLWDKK 236 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs76458.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs76458.1.1 >prot_H-canaliculatus_M_contigs76458.1.1 ID=prot_H-canaliculatus_M_contigs76458.1.1|Name=mRNA_H-canaliculatus_M_contigs76458.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=68bp NSHYGWAFAAPDDPPFVPPGGYGSVPAGGGAIPDPLHGFKTVREIYEMAVback to top mRNA from alignment at H-canaliculatus_M_contigs76458:3..206+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs76458.1.1 ID=mRNA_H-canaliculatus_M_contigs76458.1.1|Name=mRNA_H-canaliculatus_M_contigs76458.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=204bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs76458:3..206+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs76458:3..206+ >mRNA_H-canaliculatus_M_contigs76458.1.1 ID=mRNA_H-canaliculatus_M_contigs76458.1.1|Name=mRNA_H-canaliculatus_M_contigs76458.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=204bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs76458:3..206+ (Hapterophycus canaliculatus Oshoro7m male)back to top |