mRNA_H-canaliculatus_M_contigs76179.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs76179.1.1
Unique NamemRNA_H-canaliculatus_M_contigs76179.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs76179.1.1 vs.
Match: Similar (to tripeptidylpeptidase II n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMK5_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 1.920e-18
Identity = 46/58 (79.31%), Postives = 50/58 (86.21%), Query Frame = 1 
Query:   28 RVRRAMENTAKRLPGLETLVQGHGLVQVSAAFEYLSKHMEDDSEDVQYKVSDLRGGRG 201
            RVRRA+ENTAKRLP LETLVQG GLVQV+AAFEYLSKH  DDSEDV+YKV+   G RG
Sbjct:  501 RVRRALENTAKRLPALETLVQGQGLVQVAAAFEYLSKHALDDSEDVEYKVTVSGGKRG 558
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BLAST of mRNA_H-canaliculatus_M_contigs76179.1.1 vs.
Match: Subtilase (family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLL6_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 5.410e-11
Identity = 35/57 (61.40%), Postives = 44/57 (77.19%), Query Frame = 1 
Query:   10 PTSPQRRVRRAMENTAKRLPGLETLVQGHGLVQVSAAFEYLSKHMEDDSEDVQYKVS 180
            P +PQR VRRA+ENTA  L GLE LVQGHG++QV AA+E+L  H   D+EDV+Y V+
Sbjct:  463 PRTPQR-VRRAVENTAAPLAGLERLVQGHGMIQVQAAWEHLQAHAARDTEDVRYVVT 518
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BLAST of mRNA_H-canaliculatus_M_contigs76179.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9TFG4_PHATR)

HSP 1 Score: 62.4 bits (150), Expect = 1.210e-9
Identity = 30/56 (53.57%), Postives = 42/56 (75.00%), Query Frame = 1 
Query:   10 PTSPQRRVRRAMENTAKRLPGLETLVQGHGLVQVSAAFEYLSKHMEDDSEDVQYKV 177
            P SP R +RRA++N+AKRLP L TL QG G++QV  AF+YL  + +DD+ED+ + V
Sbjct:   72 PVSPAR-IRRALQNSAKRLPNLSTLQQGWGMIQVDRAFDYLQANKDDDTEDIYFDV 126
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BLAST of mRNA_H-canaliculatus_M_contigs76179.1.1 vs.
Match: Predicted (protein n=4 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FXC9_PHATC)

HSP 1 Score: 62.4 bits (150), Expect = 1.230e-9
Identity = 30/56 (53.57%), Postives = 42/56 (75.00%), Query Frame = 1 
Query:   10 PTSPQRRVRRAMENTAKRLPGLETLVQGHGLVQVSAAFEYLSKHMEDDSEDVQYKV 177
            P SP R +RRA++N+AKRLP L TL QG G++QV  AF+YL  + +DD+ED+ + V
Sbjct:  484 PVSPAR-IRRALQNSAKRLPNLSTLQQGWGMIQVDRAFDYLQANKDDDTEDIYFDV 538
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BLAST of mRNA_H-canaliculatus_M_contigs76179.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J1N7_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 3.140e-9
Identity = 31/56 (55.36%), Postives = 40/56 (71.43%), Query Frame = 1 
Query:   10 PTSPQRRVRRAMENTAKRLPGLETLVQGHGLVQVSAAFEYLSKHMEDDSEDVQYKV 177
            P SP R VRRA+ENTA+   GL  L QGHG+++V  A+EYL  H +D SEDV ++V
Sbjct:  539 PVSPAR-VRRALENTAQECEGLSALQQGHGMIRVDKAWEYLKDHRDDASEDVYFRV 593
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BLAST of mRNA_H-canaliculatus_M_contigs76179.1.1 vs.
Match: tripeptidyl-peptidase (2-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E23123)

HSP 1 Score: 53.9 bits (128), Expect = 1.200e-6
Identity = 27/57 (47.37%), Postives = 38/57 (66.67%), Query Frame = 1 
Query:   31 VRRAMENTAKRLPGLETLVQGHGLVQVSAAFEYLSKHMEDDSEDVQYKVSDLRGGRG 201
            +RRA+ENTA  + GL+ L QGHGL+QV  AFE+ S+       DV++++S   G RG
Sbjct:  812 IRRALENTALHVEGLDRLTQGHGLLQVDKAFEFCSEFSSVPERDVRFQISCSGGKRG 868
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BLAST of mRNA_H-canaliculatus_M_contigs76179.1.1 vs.
Match: Tripeptidyl-peptidase (II n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A2E6HFS1_9BACT)

HSP 1 Score: 53.1 bits (126), Expect = 2.230e-6
Identity = 27/63 (42.86%), Postives = 45/63 (71.43%), Query Frame = 1 
Query:   16 SPQRRVRRAMENTAKRLPGLETLVQGHGLVQVSAAFEYLSKHMEDDSEDVQYKVSDL-RGGRG 201
            SPQR +RRA+ NTAK++P +E   QGHG++Q+ +AF+YL  + +    D+++ V++  +G RG
Sbjct:  490 SPQR-IRRAIVNTAKQIPNVERFAQGHGVLQIDSAFDYLEANKKSKDHDLRFVVTNRSQGDRG 551
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BLAST of mRNA_H-canaliculatus_M_contigs76179.1.1 vs.
Match: Subtilisin ((Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XU46_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 3.020e-6
Identity = 28/58 (48.28%), Postives = 41/58 (70.69%), Query Frame = 1 
Query:   28 RVRRAMENTAKRLPGLETLVQGHGLVQVSAAFEYLSKHMEDDSEDVQYKVS-DLRGGR 198
            R+RRA+E TAK +PG+  L QG G++QV+ A+EY+  + +   EDV ++VS D R GR
Sbjct:   92 RIRRALEQTAKPMPGISVLQQGWGMIQVTKAWEYILANKDAPYEDVNFEVSIDNRVGR 149
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BLAST of mRNA_H-canaliculatus_M_contigs76179.1.1 vs.
Match: Tripeptidyl-peptidase (II n=4 Tax=Verrucomicrobia TaxID=74201 RepID=A0A520QBF1_9BACT)

HSP 1 Score: 52.4 bits (124), Expect = 4.180e-6
Identity = 24/59 (40.68%), Postives = 41/59 (69.49%), Query Frame = 1 
Query:   28 RVRRAMENTAKRLPGLETLVQGHGLVQVSAAFEYLSKHMEDDSEDVQYKVSDL-RGGRG 201
            R++RA+ NTAK++P +E   QGHG++Q+  AF+YL  +      D+++ +S+  +GGRG
Sbjct:  492 RIKRAIVNTAKQIPNVERFAQGHGVLQIDKAFDYLVTNKNSKDHDLRFVISNRSQGGRG 550
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BLAST of mRNA_H-canaliculatus_M_contigs76179.1.1 vs.
Match: Tripeptidyl-peptidase (II n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7V1LYR1_9BACT)

HSP 1 Score: 51.6 bits (122), Expect = 7.790e-6
Identity = 24/57 (42.11%), Postives = 37/57 (64.91%), Query Frame = 1 
Query:   31 VRRAMENTAKRLPGLETLVQGHGLVQVSAAFEYLSKHMEDDSEDVQYKVSDLRGGRG 201
            V+RA+ NTA+++P      QGHG++Q+ AA+EYL   + D   DV++ V+   G RG
Sbjct:  333 VKRALINTARQIPDQSPWAQGHGMIQIDAAYEYLVNEVNDLDRDVRFSVTGPNGVRG 389
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs76179.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Similar1.920e-1879.31to tripeptidylpeptidase II n=2 Tax=Ectocarpus TaxI... [more]
Subtilase5.410e-1161.40family-domain-containing protein n=1 Tax=Tribonema... [more]
Hypothetical1.210e-953.57protein (Fragment) n=1 Tax=Phaeodactylum tricornut... [more]
Predicted1.230e-953.57protein n=4 Tax=Phaeodactylum tricornutum TaxID=28... [more]
Hypothetical3.140e-955.36protein n=1 Tax=Odontella aurita TaxID=265563 RepI... [more]
tripeptidyl-peptidase1.200e-647.372-like n=1 Tax=Orbicella faveolata TaxID=48498 Rep... [more]
Tripeptidyl-peptidase2.230e-642.86II n=1 Tax=Verrucomicrobiales bacterium TaxID=2026... [more]
Subtilisin3.020e-648.28(Fragment) n=1 Tax=Attheya septentrionalis TaxID=4... [more]
Tripeptidyl-peptidase4.180e-640.68II n=4 Tax=Verrucomicrobia TaxID=74201 RepID=A0A52... [more]
Tripeptidyl-peptidase7.790e-642.11II n=1 Tax=Phycisphaerales bacterium TaxID=2052180... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs76179contigH-canaliculatus_M_contigs76179:8..226 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LMK5
Preferred nameTPP2
PFAMsPeptidase_S8,TPPII,TPPII_N
Model size219
Max annot lvl2759|Eukaryota
KEGG koko:K01280
Hectar predicted targeting categoryother localisation
GOsGO:0000209,GO:0003674,GO:0003824,GO:0004175,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005773,GO:0005774,GO:0005829,GO:0005840,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008240,GO:0009507,GO:0009536,GO:0009987,GO:0010883,GO:0010884,GO:0016020,GO:0016043,GO:0016567,GO:0016604,GO:0016787,GO:0017171,GO:0019538,GO:0022607,GO:0022626,GO:0031090,GO:0031974,GO:0031981,GO:0032446,GO:0032879,GO:0032991,GO:0033218,GO:0036211,GO:0042277,GO:0042802,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044451,GO:0044464,GO:0048518,GO:0050789,GO:0051259,GO:0051260,GO:0065003,GO:0065007,GO:0065008,GO:0070011,GO:0070013,GO:0070647,GO:0071704,GO:0071840,GO:0098588,GO:0098805,GO:0140096,GO:1901564,GO:1905952,GO:1905954,GO:1990904
Exons1
Evalue3.15e-19
EggNOG OGsCOG1404@1|root,KOG1114@2759|Eukaryota
EC3.4.14.10
Descriptiontripeptidyl-peptidase activity
Cds size219
COG categoryO
BRITEko00000,ko01000,ko01002,ko03110
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854099.9324756-CDS-H-canaliculatus_M_contigs76179:7..2261696854099.9324756-CDS-H-canaliculatus_M_contigs76179:7..226Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs76179 8..226 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs76179.1.1prot_H-canaliculatus_M_contigs76179.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs76179 8..226 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs76179.1.1

>prot_H-canaliculatus_M_contigs76179.1.1 ID=prot_H-canaliculatus_M_contigs76179.1.1|Name=mRNA_H-canaliculatus_M_contigs76179.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=73bp
NRPPTSPQRRVRRAMENTAKRLPGLETLVQGHGLVQVSAAFEYLSKHMED
DSEDVQYKVSDLRGGRGGQGVKE
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mRNA from alignment at H-canaliculatus_M_contigs76179:8..226-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs76179.1.1 ID=mRNA_H-canaliculatus_M_contigs76179.1.1|Name=mRNA_H-canaliculatus_M_contigs76179.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=219bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs76179:8..226- (Hapterophycus canaliculatus Oshoro7m male)
AATCGACCCCCAACTTCCCCTCAACGCAGGGTACGAAGAGCGATGGAAAA
CACGGCGAAACGCCTGCCTGGGCTGGAAACCCTCGTCCAGGGGCATGGGT
TGGTCCAGGTGTCGGCCGCTTTCGAGTACCTGTCGAAGCACATGGAAGAT
GACAGCGAGGATGTCCAGTACAAGGTGAGTGACCTGCGAGGAGGGAGAGG
GGGGCAGGGGGTGAAGGAA
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs76179:8..226-

>mRNA_H-canaliculatus_M_contigs76179.1.1 ID=mRNA_H-canaliculatus_M_contigs76179.1.1|Name=mRNA_H-canaliculatus_M_contigs76179.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=219bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs76179:8..226- (Hapterophycus canaliculatus Oshoro7m male)
AATCGACCCCCAACTTCCCCTCAACGCAGGGTACGAAGAGCGATGGAAAA
CACGGCGAAACGCCTGCCTGGGCTGGAAACCCTCGTCCAGGGGCATGGGT
TGGTCCAGGTGTCGGCCGCTTTCGAGTACCTGTCGAAGCACATGGAAGAT
GACAGCGAGGATGTCCAGTACAAGGTGAGTGACCTGCGAGGAGGGAGAGG
GGGGCAGGGGGTGAAGGAA
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