mRNA_H-canaliculatus_M_contigs7612.1.5 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7612.1.5 vs.
Match: Similar (to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF8_ECTSI) HSP 1 Score: 489 bits (1259), Expect = 5.780e-168 Identity = 250/305 (81.97%), Postives = 267/305 (87.54%), Query Frame = 1
Query: 1 ALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPGAPQPWTIVEHHSSSMPTAPAGLKRVRKTSGGNLPTVRSTSPRSRRSQDERDTDCNQKAVAKTTIVWKDTVTLGTEDAPEKTSALYSKDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEFTPAPVRVYGQFAVEAGTYTFAWQGPDGATVEKRARFSFTFRRCEPGSPQPWIIVEHHSSSMPNAPDGLKPAGADIDVAAVDQAVSEMSVAEDP 915
ALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPG+PQPWTIVEHHSSSMPTAPAGLKRV G N V+ T + + D QKAVA TTIVWKDTVTLGT+DAP+KT+ALY+ DAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRL+E+TPAPVRVYGQFAVEAGTYTFAWQG DG TVEKRARFSFTFRR +PGSPQPW IVEHHSSSMP AP LKP ++D+ + QAVSE+SVA+ P
Sbjct: 156 ALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPGSPQPWTIVEHHSSSMPTAPAGLKRV----GPNADLVKVTPKKVEITPD-------QKAVAATTIVWKDTVTLGTDDAPKKTAALYAADAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPVRVYGQFAVEAGTYTFAWQGDDGKTVEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPIAPAELKPVEPEVDMDTIVQAVSEVSVADKP 449
BLAST of mRNA_H-canaliculatus_M_contigs7612.1.5 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT29_9PHAE) HSP 1 Score: 464 bits (1195), Expect = 3.820e-160 Identity = 239/301 (79.40%), Postives = 252/301 (83.72%), Query Frame = 1
Query: 1 ALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPGAPQPWTIVEHHSSSMPTAPAGLKRVRKTS-----------------GGNLPTVRSTSPRSRRSQDERDTDCNQKAVAKTTIVWKDTVTLGTEDAPEKTSALYSKDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEFTPAPVRVYGQFAVEAGTYTFAWQGPDGATVEKRARFSFTFRRCEPGSPQPWIIVEHHSSSMPNAPDGLKPAG 852
ALYAED VLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPG+PQPWTIVEHHSSSMPTAPAGLKRV K G N V+ T + + D QKAVA TTIVWKDTVTLGT+DAP+KT+ALY+ DAVLWGTVSEEVRETPEQIYDYFDFFARLPKLR++E+TPAPVRVYG+FAVEAGTYTFAWQG DG TVEKRARFSFTFRR +PGSPQPW IVEHHSSSMP AP LKP G
Sbjct: 141 ALYAEDAVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPGSPQPWTIVEHHSSSMPTAPAGLKRVGKLYSVRVFLPVVVGCEFFKVGPNADLVKVTPKKVEITPD-------QKAVAATTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRVVEYTPAPVRVYGEFAVEAGTYTFAWQGEDGKTVEKRARFSFTFRRGKPGSPQPWTIVEHHSSSMPIAPAELKPVG 434
BLAST of mRNA_H-canaliculatus_M_contigs7612.1.5 vs.
Match: PDZ (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0Z5_9PHAE) HSP 1 Score: 457 bits (1175), Expect = 5.320e-155 Identity = 236/305 (77.38%), Postives = 260/305 (85.25%), Query Frame = 1
Query: 1 ALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPGAPQPWTIVEHHSSSMPTAPAGLKRVRKTSGGNLPT--VRSTSPRSRRSQDERDTDCNQKAVAKTTIVWKDTVTLGTEDAPEKTSALYSKDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEFTPAPVRVYGQFAVEAGTYTFAWQGPDGATVEKRARFSFTFRRCEPGSPQPWIIVEHHSSSMPNAPDGLK---PAGADIDVAAVDQAVSEMS 900
ALYAED VLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFA+QAGTYTFAFQG DG TVEKRARFSFTFRR RPG+P+PWTIVEHHSSSMPTAPAGLKRV + + +P V+ +P +QKAVA+TTIVWKDTVTLGT+DAP+KT+ALY+ DAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLE+TPAPVRVYG+FAV+AGTYTFAW+G DG TVEKRARFSFTFRR +PGSP+PW IVEHHSSSMP+AP LK P ID A QAV+++S
Sbjct: 194 ALYAEDAVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGPDGVTVEKRARFSFTFRRGRPGSPRPWTIVEHHSSSMPTAPAGLKRVGQDA---MPKKIVKEITP-------------DQKAVAETTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEYTPAPVRVYGEFAVQAGTYTFAWEGDDGDTVEKRARFSFTFRRGKPGSPRPWTIVEHHSSSMPDAPAELKHVEPEDDGIDYVA--QAVADLS 480
BLAST of mRNA_H-canaliculatus_M_contigs7612.1.5 vs.
Match: Similar (to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN21_ECTSI) HSP 1 Score: 449 bits (1156), Expect = 3.390e-152 Identity = 236/310 (76.13%), Postives = 253/310 (81.61%), Query Frame = 1
Query: 1 ALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPGAPQPWTIVEHHSSSMPTAPAGLKRVRKTSGGNLPTVRSTSPRSRRSQDERDTDCNQKAVAKTTIVWKDTVTLGTEDAPEKTSALYSKDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEFTPAPVRVYGQFAVEAGTYTFAWQGPDGATVEKRARFSFTFRRCEPGSPQPWIIVEHHSSSMPNAPDGLKPAGADIDVAAVDQAVSEMSVAEDPPPGIA 930
ALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELR+VEYTPVAVRVYGDFA+QAGTYTFAFQGADGATVEKRARFSFTFRRD P +P PWTIVEHHSSSMP APAGLKRV G N V+ T P+ E + KA ++TTIVWKDTVTLGTEDAP+KTSALY +DAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRL+E++PAP RVYGQFAV+AGTYTFAWQG D TVEKRARFSFTFRR P SP PW IVEHHSSSMP+AP GLK D AV + V ED P +A
Sbjct: 161 ALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRLVEYTPVAVRVYGDFAVQAGTYTFAFQGADGATVEKRARFSFTFRRDHPESPTPWTIVEHHSSSMPNAPAGLKRV----GPNAELVKVT-PK------ELEVTPEMKAGSETTIVWKDTVTLGTEDAPKKTSALYPEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYSPAPARVYGQFAVQAGTYTFAWQGNDDETVEKRARFSFTFRRDHPESPTPWTIVEHHSSSMPSAPAGLKRVENDP------AAVMDEVVVEDAPAVVA 453
BLAST of mRNA_H-canaliculatus_M_contigs7612.1.5 vs.
Match: Reverse (transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB09_9PHAE) HSP 1 Score: 459 bits (1180), Expect = 2.330e-145 Identity = 236/313 (75.40%), Postives = 259/313 (82.75%), Query Frame = 1
Query: 1 ALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPGAPQPWTIVEHHSSSMPTAPAGLKRVRKTSGGNLPTVRSTSPRSRRSQDERDTDCNQKAVAKTTIVWKDTVTLGTEDAPEKTSALYSKDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEFTPAPVRVYGQFAVEAGTYTFAWQGPDGATVEKRARFSFTFRRCEPGSPQPWIIVEHHSSSMPNAPDGLKPAGAD----IDVAAVDQAVSEMSVAEDPPPGI 927
ALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFA+QAGTYTFAFQGADG TVEKRARFSFTFRRD PG+P PWTIVEHHSSSMP APAGLKRV G N V+ T + + D KAV++TTIVWK+TVTLGTEDAP+KT+ALY++DAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRL+E+TPAP RVYGQFAV+AGTYTFAWQG DG TVEKRARFSFTFRR P SP PW IVEHHSSSMP+APDGLK D +D V++A + ++ E P +
Sbjct: 1286 ALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGADGETVEKRARFSFTFRRDHPGSPTPWTIVEHHSSSMPNAPAGLKRV----GPNAELVKVTPKKLEITPD-------MKAVSETTIVWKNTVTLGTEDAPKKTAALYAEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPARVYGQFAVQAGTYTFAWQGNDGETVEKRARFSFTFRRDHPESPTPWTIVEHHSSSMPSAPDGLKRVENDPAAVMDDVVVEEAPAVVAAEEPEEPAV 1587
BLAST of mRNA_H-canaliculatus_M_contigs7612.1.5 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX02_9PHAE) HSP 1 Score: 412 bits (1060), Expect = 5.450e-139 Identity = 208/287 (72.47%), Postives = 231/287 (80.49%), Query Frame = 1
Query: 1 ALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPGAPQPWTIVEHHSSSMPTAPAGLKRVRKTSGGNLP----TVRSTSPRSRRSQDERDTDCNQKAVAKTTIVWKDTVTLGTEDAPEKTSALYSKDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEFTPAPVRVYGQFAVEAGTYTFAWQGPDGATVEKRARFSFTFRRCEPGSPQPWIIVEHHSSSMPNAPDGLKPA 849
ALYA DG LWGTVSEEVRDTP+QIYAYFDYFARLPEL+VVEYTPVAVRVYGDFA+QAGTYTF++Q DG VEKRARFSFTFRRD PG +PWTIVEHHSSSMPTAPAGLK V G +P V+ T+P +QKAVA T +VWKDTVT+GT+D P KT+ LY++DA LWGTVSEEVR+TPEQIY YFD+FARLP LRL+E+TP VRVYG FAV+AGTYTF+WQ DG TVEKRARFSFTFRR +P PQ W IVEHHSSSMP AP GLKPA
Sbjct: 55 ALYAPDGTLWGTVSEEVRDTPQQIYAYFDYFARLPELKVVEYTPVAVRVYGDFAVQAGTYTFSWQADDGTIVEKRARFSFTFRRDNPGTDRPWTIVEHHSSSMPTAPAGLKAVGV--GPGIPRGPKVVKETTP-------------DQKAVAATAVVWKDTVTMGTDDTPRKTADLYAQDATLWGTVSEEVRDTPEQIYAYFDYFARLPALRLVEYTPVAVRVYGDFAVQAGTYTFSWQDNDGTTVEKRARFSFTFRR-DPSKPQQWAIVEHHSSSMPTAPAGLKPA 325
BLAST of mRNA_H-canaliculatus_M_contigs7612.1.5 vs.
Match: Similar (to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF9_ECTSI) HSP 1 Score: 414 bits (1065), Expect = 9.220e-138 Identity = 210/287 (73.17%), Postives = 232/287 (80.84%), Query Frame = 1
Query: 1 ALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPGAPQPWTIVEHHSSSMPTAPAGLKRVRKTSGGNLP----TVRSTSPRSRRSQDERDTDCNQKAVAKTTIVWKDTVTLGTEDAPEKTSALYSKDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEFTPAPVRVYGQFAVEAGTYTFAWQGPDGATVEKRARFSFTFRRCEPGSPQPWIIVEHHSSSMPNAPDGLKPA 849
ALYA DG LWGTVSEEVRDTP+QIYAYFDYFARLPELRVVEYTPVAVRVYGDFA+QAGTYTF++Q DGA VEKRARFSFTFRRD PG +PWTIVEHHSSSMPTAPAGLK V G +P V+ T+P +QKAVA T +VWKDTVT+GT+D P KT+ LY++DA LWGTVSEEVR+TPEQIY YFD+FARLP LRL+E+TP VRVYG FAV+AGTYTF+WQ DG TVEKRARFSFTFRR +P PQ W IVEHHSSSMP AP GLKPA
Sbjct: 200 ALYAPDGTLWGTVSEEVRDTPQQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFSWQADDGAIVEKRARFSFTFRRDNPGTERPWTIVEHHSSSMPTAPAGLKAVGV--GPGIPRGPKVVKETTP-------------DQKAVAATAVVWKDTVTMGTDDTPRKTADLYAQDATLWGTVSEEVRDTPEQIYAYFDYFARLPALRLVEYTPVAVRVYGDFAVQAGTYTFSWQDNDGDTVEKRARFSFTFRR-DPNKPQQWAIVEHHSSSMPTAPAGLKPA 470
BLAST of mRNA_H-canaliculatus_M_contigs7612.1.5 vs.
Match: Similar (to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY20_ECTSI) HSP 1 Score: 339 bits (870), Expect = 1.510e-106 Identity = 178/316 (56.33%), Postives = 229/316 (72.47%), Query Frame = 1
Query: 1 ALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRP-GAPQPWTIVEHHSSSMPTAPAGLKRVRKTSGGNLPT--VRSTSPRSRRSQDERDTDCNQKAVAKTTIVWKDTVTLGTEDAPEKTSALYSKDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEFTPAPVRVYGQFAVEAGTYTFAWQGPDGATVEKRARFSFTFRRC-EPGSPQPWIIVEHHSSSMPNAPDGLKPAGADIDVAAVDQAVSEM-SVAEDPPPGIAT 933
ALYAEDG LW TVSEEV +TP+QI AYF+ FARLP+LR+VEYTPVA RVYG+FA+ AGTYTFA++G DG VEKRARFSFTFRRDR GAP+PW IVEHHSSSMPTAP V T PR++ ++ D + +Q+AVA T++W V LGT++AP KT+ALY+KDA LWG+VS+ +R+TP+ IY YFD F+RLP+LRL++F P VRVYG FAV+AGTYTF+W+G GA+VE++ARF+FTFRR PG+P W IVEHH+ P GL + +D+A + ++++++ S PP T
Sbjct: 382 ALYAEDGSLWETVSEEVCNTPQQITAYFERFARLPQLRMVEYTPVAARVYGEFAVLAGTYTFAWRGEDGGPVEKRARFSFTFRRDRTRGAPRPWLIVEHHSSSMPTAPXXXXXXXXXXXXXXXXEPVDPTPPRTKAAKIGNDPNADQRAVAAATVMWTRAVALGTDEAPRKTAALYAKDATLWGSVSDAIRDTPDLIYKYFDKFSRLPELRLVDFAPVTVRVYGDFAVQAGTYTFSWRGEGGASVERQARFTFTFRRDGNPGNPYGWSIVEHHA-----VPVGLSRVSSGVDLADLSKSLADVRSATATAPPSTTT 692
BLAST of mRNA_H-canaliculatus_M_contigs7612.1.5 vs.
Match: DUF4440 (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JSB2_9PHAE) HSP 1 Score: 201 bits (511), Expect = 1.020e-59 Identity = 99/142 (69.72%), Postives = 112/142 (78.87%), Query Frame = 1
Query: 418 TDCNQKAVAKTTIVWKDTVTLGTEDAPEKTSALYSKDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEFTPAPVRVYGQFAVEAGTYTFAWQGPDGATVEKRARFSFTFRRCEPGSPQPWIIVEHHSSSMPNAPDGLK 843
T+ ++K V +TTI WK+ VTLGT DAP KT+ LY+ D VLWGTVSEEVR+TPE+IYDYFD+FARLP LRL EFTP +RVYG FA EAGTYTF WQG DG EKRARFSFTFR +P SP W IVEHHSSSMP +P LK
Sbjct: 100 TEGDRKGVEQTTIRWKEMVTLGTPDAPRKTADLYAVDGVLWGTVSEEVRDTPEEIYDYFDYFARLPNLRLSEFTPVSLRVYGDFATEAGTYTFKWQGEDGVPKEKRARFSFTFR-SDPESPTSWTIVEHHSSSMPTSPLQLK 240
BLAST of mRNA_H-canaliculatus_M_contigs7612.1.5 vs.
Match: DUF4440 (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6U8_9PHAE) HSP 1 Score: 188 bits (478), Expect = 5.140e-56 Identity = 89/141 (63.12%), Postives = 109/141 (77.30%), Query Frame = 1
Query: 427 NQKAVAKTTIVWKDTVTLGTEDAPEKTSALYSKDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEFTPAPVRVYGQFAVEAGTYTFAWQGPDGATVEKRARFSFTFRRCEPGSPQPWIIVEHHSSSMPNAPDGLKPA 849
+QKAV T W+DTVT TEDAP+KT+A+Y+ DA+ WGTVSEEVR TPE +YDYFDFFAR+PKL ++ + PAP R++G FAV AG YTFAW G DGA E RARF+F +RR E G W+++EHHSS+MP AP GLKPA
Sbjct: 14 DQKAVDAATRHWRDTVTSNTEDAPKKTAAIYADDALFWGTVSEEVRNTPEHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAVHAGAYTFAWAGADGAMTETRARFTFAYRR-ENGK---WVMIEHHSSAMPKAPPGLKPA 150 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7612.1.5 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7612.1.5 >prot_H-canaliculatus_M_contigs7612.1.5 ID=prot_H-canaliculatus_M_contigs7612.1.5|Name=mRNA_H-canaliculatus_M_contigs7612.1.5|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=343bp ALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYback to top mRNA from alignment at H-canaliculatus_M_contigs7612:2..4867+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7612.1.5 ID=mRNA_H-canaliculatus_M_contigs7612.1.5|Name=mRNA_H-canaliculatus_M_contigs7612.1.5|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=4866bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7612:2..4867+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7612:2..4867+ >mRNA_H-canaliculatus_M_contigs7612.1.5 ID=mRNA_H-canaliculatus_M_contigs7612.1.5|Name=mRNA_H-canaliculatus_M_contigs7612.1.5|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=1029bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7612:2..4867+ (Hapterophycus canaliculatus Oshoro7m male)back to top |