mRNA_H-canaliculatus_M_contigs7597.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7597.1.1 vs.
Match: ATP-dependent (DNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU42_ECTSI) HSP 1 Score: 487 bits (1253), Expect = 4.210e-166 Identity = 237/285 (83.16%), Postives = 258/285 (90.53%), Query Frame = 1
Query: 190 TNSKMGPWVRRPTERAICAEDGYDPLELMEEANREIFGNDAFRGVQEEVIRATLCGRDCFVLMPTGGGKSLCYQLPACLSKGVTFVMSPLLSLIEDQVTQLLKAPCGGIPAAHMTSATPGTAMKQIYKDLGRADKGREPSVKLVYVTPERLGNSETMLQFMHRLNDKGMLARFVIDEAHCVSSWGHDFRPDYSKLGHFKKAFPRVPVIALTATATPAVRA---DVIKSLKLNNPQQFIQSFNRTNLVFRVEEKPDKIGDAMAYVADFISRQNANSRGREVCGIVY 1035
+ SKMGPW RRP E A+CAE+GYDPLELM++ANREIFGN+ FRGVQE VIRATLCGRDCFVLMPTGGGKSLCYQLPACLSKGVTFVMSPLLSLIEDQVTQLLKAPCGGIPAAH+TSATP TA+KQIYKDLGRAD+ REPSVKL+YVTPERLGNS++ML FMHRLNDKGMLARFVIDEAHCVSSWGHDFRPDYSKLG+FKK FP VP+IALTATAT VR DVIKSL+L NP +FIQSFNRTNLVFRVEEKPDKI DAM YVADFI +QN+ + GR C +V+
Sbjct: 180 SGSKMGPWARRPEEVALCAEEGYDPLELMDDANREIFGNNGFRGVQERVIRATLCGRDCFVLMPTGGGKSLCYQLPACLSKGVTFVMSPLLSLIEDQVTQLLKAPCGGIPAAHLTSATPTTAIKQIYKDLGRADRDREPSVKLLYVTPERLGNSDSMLDFMHRLNDKGMLARFVIDEAHCVSSWGHDFRPDYSKLGYFKKTFPNVPIIALTATATTTVRPVMEDVIKSLRLVNPTKFIQSFNRTNLVFRVEEKPDKINDAMEYVADFIKKQNSKNGGR--CAMVF 462
BLAST of mRNA_H-canaliculatus_M_contigs7597.1.1 vs.
Match: DNA (helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHS9_9STRA) HSP 1 Score: 328 bits (841), Expect = 7.700e-107 Identity = 168/276 (60.87%), Postives = 203/276 (73.55%), Query Frame = 1
Query: 244 AEDGYDPLELMEEANREIFGNDAFRGVQEEVIRATLCGRDCFVLMPTGGGKSLCYQLPACLSKGVTFVMSPLLSLIEDQVTQLLKAP-CGGIPAAHMTSATPGTAMKQIYKDLGRADKGREPSVKLVYVTPERLGNSETMLQFMHRLNDKGMLARFVIDEAHCVSSWGHDFRPDYSKLGHFKKAFPRVPVIALTATATPAVRADVIKSLKLNNPQQFIQSFNRTNLVFRVEEKPDKIGDAMAYVADFISRQNANSRGR------EVCGIVYCMTQK 1050
A+D DP+ L+EEAN ++FG++ FR Q V+ TL GRD FV+MPTGGGKSLCYQLPACLSKGVT V+SPLL+LIEDQV+ L+ P CGGIPAA +TSAT QI++DL R + G EP +KL+YVTPER+ S M L+++GMLARFVIDEAHCVS WGHDFR DY KLG K+ FP VP +A+TATATP VRADVIKSLKLNN QQFI F+R NL F+V +KPDK + VA++I QN +R R + CGIVYCMT+K
Sbjct: 6 AKDAADPVRLLEEANLKLFGHNTFRDDQRAVMATTLRGRDAFVIMPTGGGKSLCYQLPACLSKGVTVVVSPLLALIEDQVSALVSNPHCGGIPAAALTSATAPVMSHQIHQDLLRCESGVEPVLKLLYVTPERVAKSGRFFDVMRSLDEQGMLARFVIDEAHCVSQWGHDFRQDYLKLGVLKQTFPHVPTLAVTATATPKVRADVIKSLKLNNVQQFIGGFDRPNLFFKVVKKPDKGKEQCELVAEYIMEQNERARQRGGPGAPDACGIVYCMTRK 281
BLAST of mRNA_H-canaliculatus_M_contigs7597.1.1 vs.
Match: Bloom (syndrome protein, DEAD/DEAH box helicase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YBT5_9STRA) HSP 1 Score: 274 bits (701), Expect = 4.420e-86 Identity = 145/263 (55.13%), Postives = 184/263 (69.96%), Query Frame = 1
Query: 262 PLELMEEANREIFGNDAFRGVQEEVIRATLCGRDCFVLMPTGGGKSLCYQLPACLSKGVTFVMSPLLSLIEDQVTQLLKAPCGGIPAAHMTSATPGTAMKQIYKDLGRADKGREPSVKLVYVTPERLGNSETMLQFMHRLNDKGMLARFVIDEAHCVSSWGHDFRPDYSKLGHFKKAFPRVPVIALTATATPAVRADVIKSLKLNNPQQFIQSFNRTNLVFRVEEKPDKIGDAMAYVADFISRQNANSRGREVCGIVYCMTQK 1050
P +L+ AN+++F ND FR Q +VI AT+ G+DCFVLMPTGGGKSLCYQLPA LSKGVT V+SPLLSLI+DQVT L++ P GIPAA +TS T T + I +L RA PS+KL+Y+TPE++ S M+ + L GMLARFVIDEAHCVS WGHDFRP+YS+LG KK FP VP++ALTATA P V ++V +SL ++ F SFNR NL F V +KP GD A A + + + + + CGIVYCMT++
Sbjct: 119 PQDLLARANKKVFSNDGFRKNQRQVIEATMRGQDCFVLMPTGGGKSLCYQLPAVLSKGVTIVVSPLLSLIQDQVTALIQNPGCGIPAAFLTSQTTLTLKRSITAELRRA----VPSIKLLYLTPEKIVKSAEMMDLLQNLQRNGMLARFVIDEAHCVSQWGHDFRPEYSQLGILKKTFPNVPLMALTATAPPKVISNVQRSLHISKGLVFSMSFNRQNLTFEVRDKPVG-GDKKAMEA--LYQLISTTYSPDACGIVYCMTKQ 374
BLAST of mRNA_H-canaliculatus_M_contigs7597.1.1 vs.
Match: ATP-dependent (DNA helicase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBX1_PYTIN) HSP 1 Score: 272 bits (695), Expect = 8.850e-83 Identity = 148/261 (56.70%), Postives = 180/261 (68.97%), Query Frame = 1
Query: 268 ELMEEANREIFGNDAFRGVQEEVIRATLCGRDCFVLMPTGGGKSLCYQLPACLSKGVTFVMSPLLSLIEDQVTQLLKAPCGGIPAAHMTSATPGTAMKQIYKDLGRADKGREPSVKLVYVTPERLGNSETMLQFMHRLNDKGMLARFVIDEAHCVSSWGHDFRPDYSKLGHFKKAFPRVPVIALTATATPAVRADVIKSLKLNNPQQFIQSFNRTNLVFRVEEKPDKIGDAMAYVADFISRQNANSRGREVCGIVYCMTQK 1050
+L+ AN+ IFGND+FR Q EVI AT+ G D VLMPTGGGKSLCYQLPA LS GVT V+SPLLSLI+DQVT L++ P GIPAA ++S T T + I ++L +GR P++KL+YVTPE++ SE M+ M L GMLARFVIDEAHCVS WGHDFRPDYSKLG K FP VP++ALTATA P V V +SLK+ N + F SFNR NL F V EKP + A+ + IS + S GIVYCMT++
Sbjct: 163 DLISRANKLIFGNDSFRKNQREVIEATMRGEDVXVLMPTGGGKSLCYQLPAVLSPGVTIVVSPLLSLIQDQVTALIRNPLCGIPAAFLSSQTGITLHRAIAREL----RGRFPTLKLLYVTPEKIAKSEEMMSLMQGLYANGMLARFVIDEAHCVSQWGHDFRPDYSKLGLLKDEFPDVPLMALTATAPPKVIQGVQRSLKIRNAKIFSMSFNRPNLSFEVREKPLQEAKALEALHQVISTEFQES----AVGIVYCMTKQ 415
BLAST of mRNA_H-canaliculatus_M_contigs7597.1.1 vs.
Match: ATP-dependent (DNA helicase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WD55_GLOUD) HSP 1 Score: 272 bits (696), Expect = 1.450e-82 Identity = 143/263 (54.37%), Postives = 185/263 (70.34%), Query Frame = 1
Query: 262 PLELMEEANREIFGNDAFRGVQEEVIRATLCGRDCFVLMPTGGGKSLCYQLPACLSKGVTFVMSPLLSLIEDQVTQLLKAPCGGIPAAHMTSATPGTAMKQIYKDLGRADKGREPSVKLVYVTPERLGNSETMLQFMHRLNDKGMLARFVIDEAHCVSSWGHDFRPDYSKLGHFKKAFPRVPVIALTATATPAVRADVIKSLKLNNPQQFIQSFNRTNLVFRVEEKPDKIGDAMAYVADFISRQNANSRGREVCGIVYCMTQK 1050
P ++++ AN+ IFGND+FR Q +VI AT+ +DCFVLMPTGGGKSLCYQLPA L+ GVT V+SPLLSLI+DQVT L++ P GIPA +++S T T + I ++L R +PS+KL+YVTPE+LGNS M++ + L+ GMLARFVIDEAHCVS WGHDFRPDY KLG K FP VP++ALTATA P V V +SLK+ F +FNR NL F V +KP A+ + + I+R A ++ GIVYCMT++
Sbjct: 213 PRDILDRANKAIFGNDSFRKNQRQVIEATMRKQDCFVLMPTGGGKSLCYQLPAVLTPGVTIVVSPLLSLIQDQVTALIRNPRCGIPAGYLSSQTGITLRRAITQELKR----NKPSLKLLYVTPEKLGNSAEMIELLEILHHNGMLARFVIDEAHCVSQWGHDFRPDYMKLGMLKTRFPDVPLMALTATAPPKVIQGVQRSLKITKGPVFSMNFNRPNLSFEVLDKPYDDRKALQALHELITRSFA----QDAVGIVYCMTKQ 467
BLAST of mRNA_H-canaliculatus_M_contigs7597.1.1 vs.
Match: ATP-dependent (DNA helicase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GQI3_PHYRM) HSP 1 Score: 268 bits (686), Expect = 2.740e-82 Identity = 143/264 (54.17%), Postives = 181/264 (68.56%), Query Frame = 1
Query: 262 PLELMEEANREIFGNDAFRGVQEEVIRATLCGRDCFVLMPTGGGKSLCYQLPACLSKGVTFVMSPLLSLIEDQVTQLLKAPCGGIPAAHMTSATPGTAMKQIYKDLGRADKGREPSVKLVYVTPERLGNSETMLQFMHRLNDKGMLARFVIDEAHCVSSWGHDFRPDYSKLGHFKKAFPRVPVIALTATATPAVRADVIKSLKLNNPQQFIQSFNRTNLVFRVEEKP-DKIGDAMAYVADFISRQNANSRGREVCGIVYCMTQK 1050
P +L+ AN+ +FGND+FR Q +V+ AT+ G DCFVLMPTGGGKSLCYQLPA LSKGVT V+SPLLSLI+DQVT L++ GIPAA +TS T T + I +L R PS+KL+Y+TPE++ S M++ + L+ G LARFV+DEAHCVS WGHDFRP+YS+LG KK FP+VPV+ALTATA P V V +SL+++ F SFNRTNL F V +KP AM + IS + R GIVYCMT++
Sbjct: 101 PPDLLARANKAVFGNDSFRQNQRQVVEATMRGEDCFVLMPTGGGKSLCYQLPAVLSKGVTVVVSPLLSLIQDQVTALIRNRGCGIPAAFLTSQTVVTLKRSITAELRRPT----PSLKLLYLTPEKIVKSAEMMELLQVLHGNGALARFVVDEAHCVSQWGHDFRPEYSQLGLLKKTFPKVPVMALTATAPPKVIEGVQRSLRISKGHVFSMSFNRTNLTFEVRDKPLGSNAKAMEALFQLIS----TTYPRNAVGIVYCMTKQ 356
BLAST of mRNA_H-canaliculatus_M_contigs7597.1.1 vs.
Match: ATP-dependent (DNA helicase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A425CKQ2_9STRA) HSP 1 Score: 269 bits (687), Expect = 3.240e-82 Identity = 149/284 (52.46%), Postives = 189/284 (66.55%), Query Frame = 1
Query: 229 ERAICAEDGY-------DPLELMEEANREIFGNDAFRGVQEEVIRATLCGRDCFVLMPTGGGKSLCYQLPACLSKGVTFVMSPLLSLIEDQVTQLLKAPCGGIPAAHMTSATPGTAMKQIYKDLGRADKGREPSVKLVYVTPERLGNSETMLQFMHRLNDKGMLARFVIDEAHCVSSWGHDFRPDYSKLGHFKKAFPRVPVIALTATATPAVRADVIKSLKLNNPQQFIQSFNRTNLVFRVEEKP---DKIGDAMAYVADFISRQNANSRGREVCGIVYCMTQK 1050
+RAI Y +P +L+ AN+ +FGN+ FR Q +V+ T+ G+DCFVLMPTGGGKSLCYQLPA LSKGVT V+SPLLSLI+DQVT L++ P GIPAA +TS T T + I +L R PSVKL+Y+TPE++ SE M+ + L+ LARFVIDEAHCVS WGHDFRP+YS+LG KK FP VP++ALTATA P V D+ +SL+++ F SFNR NL F V EKP DK AM + FIS + ++ GIVYCMT++
Sbjct: 100 KRAIETSGAYFLGPAAKNPQDLVTSANKNVFGNEKFRKNQRQVVETTMRGQDCFVLMPTGGGKSLCYQLPAVLSKGVTIVVSPLLSLIQDQVTALVQNPKCGIPAAFLTSHTALTLKRSIVAELRRPI----PSVKLLYLTPEKIVKSEEMMDLLQTLHRNKALARFVIDEAHCVSQWGHDFRPEYSQLGLLKKTFPDVPLMALTATAPPKVIKDIQRSLRISKGLVFSMSFNRQNLTFEVREKPRGSDKT--AMEALYQFIS----TTYSQDAVGIVYCMTKQ 373
BLAST of mRNA_H-canaliculatus_M_contigs7597.1.1 vs.
Match: ATP-dependent (DNA helicase n=13 Tax=Phytophthora TaxID=4783 RepID=A0A0W8D3S3_PHYNI) HSP 1 Score: 268 bits (685), Expect = 4.620e-82 Identity = 145/261 (55.56%), Postives = 181/261 (69.35%), Query Frame = 1
Query: 268 ELMEEANREIFGNDAFRGVQEEVIRATLCGRDCFVLMPTGGGKSLCYQLPACLSKGVTFVMSPLLSLIEDQVTQLLKAPCGGIPAAHMTSATPGTAMKQIYKDLGRADKGREPSVKLVYVTPERLGNSETMLQFMHRLNDKGMLARFVIDEAHCVSSWGHDFRPDYSKLGHFKKAFPRVPVIALTATATPAVRADVIKSLKLNNPQQFIQSFNRTNLVFRVEEKPDKIGDAMAYVADFISRQNANSRGREVCGIVYCMTQK 1050
+++ ANR++FGND FR Q EVI AT+ G DCFVLMPTGGGKSLCYQLPA LSKGVT V+SPLLSLI+DQVT L++ P GIPAA +TS T T + I +L K PSVKL+Y+TPE++ S M+ + L+ MLARFVIDEAHCVS WGHDFRP+Y++LG KK FP VP++ALTATA P V V KSL ++N F SFNR NL F V +KP + GD A A + + + + + GIVYCMT++
Sbjct: 110 DILTRANRKVFGNDGFRKNQREVIEATMRGEDCFVLMPTGGGKSLCYQLPAVLSKGVTIVVSPLLSLIQDQVTALIQNPGCGIPAAFLTSQTSLTLKRSITAEL----KCSAPSVKLLYLTPEKVIKSPEMMDLLKDLHRNKMLARFVIDEAHCVSQWGHDFRPEYNQLGILKKTFPTVPLMALTATAPPKVIDHVKKSLMISNGHVFSMSFNRQNLTFEVRDKP-RGGDKKAMEA--LYQHISTTYAPDAVGIVYCMTKQ 363
BLAST of mRNA_H-canaliculatus_M_contigs7597.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CM96_PYTOL) HSP 1 Score: 267 bits (682), Expect = 2.740e-81 Identity = 143/261 (54.79%), Postives = 179/261 (68.58%), Query Frame = 1
Query: 268 ELMEEANREIFGNDAFRGVQEEVIRATLCGRDCFVLMPTGGGKSLCYQLPACLSKGVTFVMSPLLSLIEDQVTQLLKAPCGGIPAAHMTSATPGTAMKQIYKDLGRADKGREPSVKLVYVTPERLGNSETMLQFMHRLNDKGMLARFVIDEAHCVSSWGHDFRPDYSKLGHFKKAFPRVPVIALTATATPAVRADVIKSLKLNNPQQFIQSFNRTNLVFRVEEKPDKIGDAMAYVADFISRQNANSRGREVCGIVYCMTQK 1050
+++ AN+ IFGNDAFR Q EVI T+ DCFVLMPTGGGKSLCYQLPA LS GVT V+SPLLSLI+DQVT L++ GIPAA ++S T T + I ++L R PS+KL+YVTPE++ SE M++ M L+ GMLARFVIDEAHCVS WGHDFRPDYSKLG K FP VP++ALTATA P V V +SLK++ + F +FNR NL F V EKP A+ + ++ + +E GIVYCMT++
Sbjct: 147 DMVSRANKIIFGNDAFRKNQREVIDCTMRKDDCFVLMPTGGGKSLCYQLPAVLSPGVTIVVSPLLSLIQDQVTALIRNRGCGIPAAFLSSQTSMTLKRAIVRELRRP----RPSLKLLYVTPEKIAKSEEMMELMQILHSNGMLARFVIDEAHCVSQWGHDFRPDYSKLGILKATFPEVPLMALTATAPPKVIQGVQRSLKISKAKIFSMNFNRPNLAFEVREKPMPEAKALETLYQVLTTEFR----KEDVGIVYCMTKQ 399
BLAST of mRNA_H-canaliculatus_M_contigs7597.1.1 vs.
Match: ATP-dependent (DNA helicase n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3SMB9_9STRA) HSP 1 Score: 266 bits (680), Expect = 4.570e-81 Identity = 144/270 (53.33%), Postives = 187/270 (69.26%), Query Frame = 1
Query: 250 DGYDPLELMEEANREIFGNDAFRGVQEEVIRATLCGRDCFVLMPTGGGKSLCYQLPACLSKGVTFVMSPLLSLIEDQVTQLLKAPCGGIPAAHMTSATPGTAMKQIYKDLGRADKGREPSVKLVYVTPERLGNSETMLQFMHRLNDKGMLARFVIDEAHCVSSWGHDFRPDYSKLGHFKKAFPRVPVIALTATATPAVRADVIKSLKLNNPQQFIQSFNRTNLVFRVEEKPDKIGD---AMAYVADFISRQNANSRGREVCGIVYCMTQK 1050
D +P +L+ ANR++FGN++FR Q +V+ AT+ G DCFVLMPTGGGKSLCYQLPA LS GVT V+SPLLSLI+DQVT L++ P GIPAA +TS T T + I +L R PS+KL+Y+TPE++ SE M + L+ MLARFVIDEAHCVS WGHDFRP+YS+LG KK +P VP++ALTATA P V V +SL+++N F SFNR NL F V +KP +G A+ + + IS+ + R+ GIVYCMT++
Sbjct: 127 DMTEPQDLLARANRKVFGNESFRQNQRQVMEATMRGEDCFVLMPTGGGKSLCYQLPAVLSAGVTIVVSPLLSLIQDQVTALIQNPRCGIPAAFLTSQTALTLKRAITAELRRP----VPSLKLLYLTPEKIVKSEEMADLLLTLHRNKMLARFVIDEAHCVSQWGHDFRPEYSQLGMLKKTYPDVPLMALTATAPPKVIQGVQRSLRISNGPVFSMSFNRQNLTFEVRDKP--LGSDVKALEALYELISK----TYPRDAVGIVYCMTKQ 386 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7597.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7597.1.1 >prot_H-canaliculatus_M_contigs7597.1.1 ID=prot_H-canaliculatus_M_contigs7597.1.1|Name=mRNA_H-canaliculatus_M_contigs7597.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=350bp AAGGVSNGFGAPFGSTSRSGSGGVSDTNLSMGGNIRSNGGNRRSAAAGGGback to top mRNA from alignment at H-canaliculatus_M_contigs7597:25..4626+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7597.1.1 ID=mRNA_H-canaliculatus_M_contigs7597.1.1|Name=mRNA_H-canaliculatus_M_contigs7597.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=4602bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7597:25..4626+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7597:25..4626+ >mRNA_H-canaliculatus_M_contigs7597.1.1 ID=mRNA_H-canaliculatus_M_contigs7597.1.1|Name=mRNA_H-canaliculatus_M_contigs7597.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=1050bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7597:25..4626+ (Hapterophycus canaliculatus Oshoro7m male)back to top |