mRNA_H-canaliculatus_M_contigs7597.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs7597.1.1
Unique NamemRNA_H-canaliculatus_M_contigs7597.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7597.1.1 vs.
Match: ATP-dependent (DNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU42_ECTSI)

HSP 1 Score: 487 bits (1253), Expect = 4.210e-166
Identity = 237/285 (83.16%), Postives = 258/285 (90.53%), Query Frame = 1
Query:  190 TNSKMGPWVRRPTERAICAEDGYDPLELMEEANREIFGNDAFRGVQEEVIRATLCGRDCFVLMPTGGGKSLCYQLPACLSKGVTFVMSPLLSLIEDQVTQLLKAPCGGIPAAHMTSATPGTAMKQIYKDLGRADKGREPSVKLVYVTPERLGNSETMLQFMHRLNDKGMLARFVIDEAHCVSSWGHDFRPDYSKLGHFKKAFPRVPVIALTATATPAVRA---DVIKSLKLNNPQQFIQSFNRTNLVFRVEEKPDKIGDAMAYVADFISRQNANSRGREVCGIVY 1035
            + SKMGPW RRP E A+CAE+GYDPLELM++ANREIFGN+ FRGVQE VIRATLCGRDCFVLMPTGGGKSLCYQLPACLSKGVTFVMSPLLSLIEDQVTQLLKAPCGGIPAAH+TSATP TA+KQIYKDLGRAD+ REPSVKL+YVTPERLGNS++ML FMHRLNDKGMLARFVIDEAHCVSSWGHDFRPDYSKLG+FKK FP VP+IALTATAT  VR    DVIKSL+L NP +FIQSFNRTNLVFRVEEKPDKI DAM YVADFI +QN+ + GR  C +V+
Sbjct:  180 SGSKMGPWARRPEEVALCAEEGYDPLELMDDANREIFGNNGFRGVQERVIRATLCGRDCFVLMPTGGGKSLCYQLPACLSKGVTFVMSPLLSLIEDQVTQLLKAPCGGIPAAHLTSATPTTAIKQIYKDLGRADRDREPSVKLLYVTPERLGNSDSMLDFMHRLNDKGMLARFVIDEAHCVSSWGHDFRPDYSKLGYFKKTFPNVPIIALTATATTTVRPVMEDVIKSLRLVNPTKFIQSFNRTNLVFRVEEKPDKINDAMEYVADFIKKQNSKNGGR--CAMVF 462          
BLAST of mRNA_H-canaliculatus_M_contigs7597.1.1 vs.
Match: DNA (helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHS9_9STRA)

HSP 1 Score: 328 bits (841), Expect = 7.700e-107
Identity = 168/276 (60.87%), Postives = 203/276 (73.55%), Query Frame = 1
Query:  244 AEDGYDPLELMEEANREIFGNDAFRGVQEEVIRATLCGRDCFVLMPTGGGKSLCYQLPACLSKGVTFVMSPLLSLIEDQVTQLLKAP-CGGIPAAHMTSATPGTAMKQIYKDLGRADKGREPSVKLVYVTPERLGNSETMLQFMHRLNDKGMLARFVIDEAHCVSSWGHDFRPDYSKLGHFKKAFPRVPVIALTATATPAVRADVIKSLKLNNPQQFIQSFNRTNLVFRVEEKPDKIGDAMAYVADFISRQNANSRGR------EVCGIVYCMTQK 1050
            A+D  DP+ L+EEAN ++FG++ FR  Q  V+  TL GRD FV+MPTGGGKSLCYQLPACLSKGVT V+SPLL+LIEDQV+ L+  P CGGIPAA +TSAT      QI++DL R + G EP +KL+YVTPER+  S      M  L+++GMLARFVIDEAHCVS WGHDFR DY KLG  K+ FP VP +A+TATATP VRADVIKSLKLNN QQFI  F+R NL F+V +KPDK  +    VA++I  QN  +R R      + CGIVYCMT+K
Sbjct:    6 AKDAADPVRLLEEANLKLFGHNTFRDDQRAVMATTLRGRDAFVIMPTGGGKSLCYQLPACLSKGVTVVVSPLLALIEDQVSALVSNPHCGGIPAAALTSATAPVMSHQIHQDLLRCESGVEPVLKLLYVTPERVAKSGRFFDVMRSLDEQGMLARFVIDEAHCVSQWGHDFRQDYLKLGVLKQTFPHVPTLAVTATATPKVRADVIKSLKLNNVQQFIGGFDRPNLFFKVVKKPDKGKEQCELVAEYIMEQNERARQRGGPGAPDACGIVYCMTRK 281          
BLAST of mRNA_H-canaliculatus_M_contigs7597.1.1 vs.
Match: Bloom (syndrome protein, DEAD/DEAH box helicase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YBT5_9STRA)

HSP 1 Score: 274 bits (701), Expect = 4.420e-86
Identity = 145/263 (55.13%), Postives = 184/263 (69.96%), Query Frame = 1
Query:  262 PLELMEEANREIFGNDAFRGVQEEVIRATLCGRDCFVLMPTGGGKSLCYQLPACLSKGVTFVMSPLLSLIEDQVTQLLKAPCGGIPAAHMTSATPGTAMKQIYKDLGRADKGREPSVKLVYVTPERLGNSETMLQFMHRLNDKGMLARFVIDEAHCVSSWGHDFRPDYSKLGHFKKAFPRVPVIALTATATPAVRADVIKSLKLNNPQQFIQSFNRTNLVFRVEEKPDKIGDAMAYVADFISRQNANSRGREVCGIVYCMTQK 1050
            P +L+  AN+++F ND FR  Q +VI AT+ G+DCFVLMPTGGGKSLCYQLPA LSKGVT V+SPLLSLI+DQVT L++ P  GIPAA +TS T  T  + I  +L RA     PS+KL+Y+TPE++  S  M+  +  L   GMLARFVIDEAHCVS WGHDFRP+YS+LG  KK FP VP++ALTATA P V ++V +SL ++    F  SFNR NL F V +KP   GD  A  A  + +  + +   + CGIVYCMT++
Sbjct:  119 PQDLLARANKKVFSNDGFRKNQRQVIEATMRGQDCFVLMPTGGGKSLCYQLPAVLSKGVTIVVSPLLSLIQDQVTALIQNPGCGIPAAFLTSQTTLTLKRSITAELRRA----VPSIKLLYLTPEKIVKSAEMMDLLQNLQRNGMLARFVIDEAHCVSQWGHDFRPEYSQLGILKKTFPNVPLMALTATAPPKVISNVQRSLHISKGLVFSMSFNRQNLTFEVRDKPVG-GDKKAMEA--LYQLISTTYSPDACGIVYCMTKQ 374          
BLAST of mRNA_H-canaliculatus_M_contigs7597.1.1 vs.
Match: ATP-dependent (DNA helicase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBX1_PYTIN)

HSP 1 Score: 272 bits (695), Expect = 8.850e-83
Identity = 148/261 (56.70%), Postives = 180/261 (68.97%), Query Frame = 1
Query:  268 ELMEEANREIFGNDAFRGVQEEVIRATLCGRDCFVLMPTGGGKSLCYQLPACLSKGVTFVMSPLLSLIEDQVTQLLKAPCGGIPAAHMTSATPGTAMKQIYKDLGRADKGREPSVKLVYVTPERLGNSETMLQFMHRLNDKGMLARFVIDEAHCVSSWGHDFRPDYSKLGHFKKAFPRVPVIALTATATPAVRADVIKSLKLNNPQQFIQSFNRTNLVFRVEEKPDKIGDAMAYVADFISRQNANSRGREVCGIVYCMTQK 1050
            +L+  AN+ IFGND+FR  Q EVI AT+ G D  VLMPTGGGKSLCYQLPA LS GVT V+SPLLSLI+DQVT L++ P  GIPAA ++S T  T  + I ++L    +GR P++KL+YVTPE++  SE M+  M  L   GMLARFVIDEAHCVS WGHDFRPDYSKLG  K  FP VP++ALTATA P V   V +SLK+ N + F  SFNR NL F V EKP +   A+  +   IS +   S      GIVYCMT++
Sbjct:  163 DLISRANKLIFGNDSFRKNQREVIEATMRGEDVXVLMPTGGGKSLCYQLPAVLSPGVTIVVSPLLSLIQDQVTALIRNPLCGIPAAFLSSQTGITLHRAIAREL----RGRFPTLKLLYVTPEKIAKSEEMMSLMQGLYANGMLARFVIDEAHCVSQWGHDFRPDYSKLGLLKDEFPDVPLMALTATAPPKVIQGVQRSLKIRNAKIFSMSFNRPNLSFEVREKPLQEAKALEALHQVISTEFQES----AVGIVYCMTKQ 415          
BLAST of mRNA_H-canaliculatus_M_contigs7597.1.1 vs.
Match: ATP-dependent (DNA helicase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WD55_GLOUD)

HSP 1 Score: 272 bits (696), Expect = 1.450e-82
Identity = 143/263 (54.37%), Postives = 185/263 (70.34%), Query Frame = 1
Query:  262 PLELMEEANREIFGNDAFRGVQEEVIRATLCGRDCFVLMPTGGGKSLCYQLPACLSKGVTFVMSPLLSLIEDQVTQLLKAPCGGIPAAHMTSATPGTAMKQIYKDLGRADKGREPSVKLVYVTPERLGNSETMLQFMHRLNDKGMLARFVIDEAHCVSSWGHDFRPDYSKLGHFKKAFPRVPVIALTATATPAVRADVIKSLKLNNPQQFIQSFNRTNLVFRVEEKPDKIGDAMAYVADFISRQNANSRGREVCGIVYCMTQK 1050
            P ++++ AN+ IFGND+FR  Q +VI AT+  +DCFVLMPTGGGKSLCYQLPA L+ GVT V+SPLLSLI+DQVT L++ P  GIPA +++S T  T  + I ++L R     +PS+KL+YVTPE+LGNS  M++ +  L+  GMLARFVIDEAHCVS WGHDFRPDY KLG  K  FP VP++ALTATA P V   V +SLK+     F  +FNR NL F V +KP     A+  + + I+R  A    ++  GIVYCMT++
Sbjct:  213 PRDILDRANKAIFGNDSFRKNQRQVIEATMRKQDCFVLMPTGGGKSLCYQLPAVLTPGVTIVVSPLLSLIQDQVTALIRNPRCGIPAGYLSSQTGITLRRAITQELKR----NKPSLKLLYVTPEKLGNSAEMIELLEILHHNGMLARFVIDEAHCVSQWGHDFRPDYMKLGMLKTRFPDVPLMALTATAPPKVIQGVQRSLKITKGPVFSMNFNRPNLSFEVLDKPYDDRKALQALHELITRSFA----QDAVGIVYCMTKQ 467          
BLAST of mRNA_H-canaliculatus_M_contigs7597.1.1 vs.
Match: ATP-dependent (DNA helicase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GQI3_PHYRM)

HSP 1 Score: 268 bits (686), Expect = 2.740e-82
Identity = 143/264 (54.17%), Postives = 181/264 (68.56%), Query Frame = 1
Query:  262 PLELMEEANREIFGNDAFRGVQEEVIRATLCGRDCFVLMPTGGGKSLCYQLPACLSKGVTFVMSPLLSLIEDQVTQLLKAPCGGIPAAHMTSATPGTAMKQIYKDLGRADKGREPSVKLVYVTPERLGNSETMLQFMHRLNDKGMLARFVIDEAHCVSSWGHDFRPDYSKLGHFKKAFPRVPVIALTATATPAVRADVIKSLKLNNPQQFIQSFNRTNLVFRVEEKP-DKIGDAMAYVADFISRQNANSRGREVCGIVYCMTQK 1050
            P +L+  AN+ +FGND+FR  Q +V+ AT+ G DCFVLMPTGGGKSLCYQLPA LSKGVT V+SPLLSLI+DQVT L++    GIPAA +TS T  T  + I  +L R      PS+KL+Y+TPE++  S  M++ +  L+  G LARFV+DEAHCVS WGHDFRP+YS+LG  KK FP+VPV+ALTATA P V   V +SL+++    F  SFNRTNL F V +KP      AM  +   IS     +  R   GIVYCMT++
Sbjct:  101 PPDLLARANKAVFGNDSFRQNQRQVVEATMRGEDCFVLMPTGGGKSLCYQLPAVLSKGVTVVVSPLLSLIQDQVTALIRNRGCGIPAAFLTSQTVVTLKRSITAELRRPT----PSLKLLYLTPEKIVKSAEMMELLQVLHGNGALARFVVDEAHCVSQWGHDFRPEYSQLGLLKKTFPKVPVMALTATAPPKVIEGVQRSLRISKGHVFSMSFNRTNLTFEVRDKPLGSNAKAMEALFQLIS----TTYPRNAVGIVYCMTKQ 356          
BLAST of mRNA_H-canaliculatus_M_contigs7597.1.1 vs.
Match: ATP-dependent (DNA helicase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A425CKQ2_9STRA)

HSP 1 Score: 269 bits (687), Expect = 3.240e-82
Identity = 149/284 (52.46%), Postives = 189/284 (66.55%), Query Frame = 1
Query:  229 ERAICAEDGY-------DPLELMEEANREIFGNDAFRGVQEEVIRATLCGRDCFVLMPTGGGKSLCYQLPACLSKGVTFVMSPLLSLIEDQVTQLLKAPCGGIPAAHMTSATPGTAMKQIYKDLGRADKGREPSVKLVYVTPERLGNSETMLQFMHRLNDKGMLARFVIDEAHCVSSWGHDFRPDYSKLGHFKKAFPRVPVIALTATATPAVRADVIKSLKLNNPQQFIQSFNRTNLVFRVEEKP---DKIGDAMAYVADFISRQNANSRGREVCGIVYCMTQK 1050
            +RAI     Y       +P +L+  AN+ +FGN+ FR  Q +V+  T+ G+DCFVLMPTGGGKSLCYQLPA LSKGVT V+SPLLSLI+DQVT L++ P  GIPAA +TS T  T  + I  +L R      PSVKL+Y+TPE++  SE M+  +  L+    LARFVIDEAHCVS WGHDFRP+YS+LG  KK FP VP++ALTATA P V  D+ +SL+++    F  SFNR NL F V EKP   DK   AM  +  FIS     +  ++  GIVYCMT++
Sbjct:  100 KRAIETSGAYFLGPAAKNPQDLVTSANKNVFGNEKFRKNQRQVVETTMRGQDCFVLMPTGGGKSLCYQLPAVLSKGVTIVVSPLLSLIQDQVTALVQNPKCGIPAAFLTSHTALTLKRSIVAELRRPI----PSVKLLYLTPEKIVKSEEMMDLLQTLHRNKALARFVIDEAHCVSQWGHDFRPEYSQLGLLKKTFPDVPLMALTATAPPKVIKDIQRSLRISKGLVFSMSFNRQNLTFEVREKPRGSDKT--AMEALYQFIS----TTYSQDAVGIVYCMTKQ 373          
BLAST of mRNA_H-canaliculatus_M_contigs7597.1.1 vs.
Match: ATP-dependent (DNA helicase n=13 Tax=Phytophthora TaxID=4783 RepID=A0A0W8D3S3_PHYNI)

HSP 1 Score: 268 bits (685), Expect = 4.620e-82
Identity = 145/261 (55.56%), Postives = 181/261 (69.35%), Query Frame = 1
Query:  268 ELMEEANREIFGNDAFRGVQEEVIRATLCGRDCFVLMPTGGGKSLCYQLPACLSKGVTFVMSPLLSLIEDQVTQLLKAPCGGIPAAHMTSATPGTAMKQIYKDLGRADKGREPSVKLVYVTPERLGNSETMLQFMHRLNDKGMLARFVIDEAHCVSSWGHDFRPDYSKLGHFKKAFPRVPVIALTATATPAVRADVIKSLKLNNPQQFIQSFNRTNLVFRVEEKPDKIGDAMAYVADFISRQNANSRGREVCGIVYCMTQK 1050
            +++  ANR++FGND FR  Q EVI AT+ G DCFVLMPTGGGKSLCYQLPA LSKGVT V+SPLLSLI+DQVT L++ P  GIPAA +TS T  T  + I  +L    K   PSVKL+Y+TPE++  S  M+  +  L+   MLARFVIDEAHCVS WGHDFRP+Y++LG  KK FP VP++ALTATA P V   V KSL ++N   F  SFNR NL F V +KP + GD  A  A  + +  + +   +  GIVYCMT++
Sbjct:  110 DILTRANRKVFGNDGFRKNQREVIEATMRGEDCFVLMPTGGGKSLCYQLPAVLSKGVTIVVSPLLSLIQDQVTALIQNPGCGIPAAFLTSQTSLTLKRSITAEL----KCSAPSVKLLYLTPEKVIKSPEMMDLLKDLHRNKMLARFVIDEAHCVSQWGHDFRPEYNQLGILKKTFPTVPLMALTATAPPKVIDHVKKSLMISNGHVFSMSFNRQNLTFEVRDKP-RGGDKKAMEA--LYQHISTTYAPDAVGIVYCMTKQ 363          
BLAST of mRNA_H-canaliculatus_M_contigs7597.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CM96_PYTOL)

HSP 1 Score: 267 bits (682), Expect = 2.740e-81
Identity = 143/261 (54.79%), Postives = 179/261 (68.58%), Query Frame = 1
Query:  268 ELMEEANREIFGNDAFRGVQEEVIRATLCGRDCFVLMPTGGGKSLCYQLPACLSKGVTFVMSPLLSLIEDQVTQLLKAPCGGIPAAHMTSATPGTAMKQIYKDLGRADKGREPSVKLVYVTPERLGNSETMLQFMHRLNDKGMLARFVIDEAHCVSSWGHDFRPDYSKLGHFKKAFPRVPVIALTATATPAVRADVIKSLKLNNPQQFIQSFNRTNLVFRVEEKPDKIGDAMAYVADFISRQNANSRGREVCGIVYCMTQK 1050
            +++  AN+ IFGNDAFR  Q EVI  T+   DCFVLMPTGGGKSLCYQLPA LS GVT V+SPLLSLI+DQVT L++    GIPAA ++S T  T  + I ++L R      PS+KL+YVTPE++  SE M++ M  L+  GMLARFVIDEAHCVS WGHDFRPDYSKLG  K  FP VP++ALTATA P V   V +SLK++  + F  +FNR NL F V EKP     A+  +   ++ +      +E  GIVYCMT++
Sbjct:  147 DMVSRANKIIFGNDAFRKNQREVIDCTMRKDDCFVLMPTGGGKSLCYQLPAVLSPGVTIVVSPLLSLIQDQVTALIRNRGCGIPAAFLSSQTSMTLKRAIVRELRRP----RPSLKLLYVTPEKIAKSEEMMELMQILHSNGMLARFVIDEAHCVSQWGHDFRPDYSKLGILKATFPEVPLMALTATAPPKVIQGVQRSLKISKAKIFSMNFNRPNLAFEVREKPMPEAKALETLYQVLTTEFR----KEDVGIVYCMTKQ 399          
BLAST of mRNA_H-canaliculatus_M_contigs7597.1.1 vs.
Match: ATP-dependent (DNA helicase n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3SMB9_9STRA)

HSP 1 Score: 266 bits (680), Expect = 4.570e-81
Identity = 144/270 (53.33%), Postives = 187/270 (69.26%), Query Frame = 1
Query:  250 DGYDPLELMEEANREIFGNDAFRGVQEEVIRATLCGRDCFVLMPTGGGKSLCYQLPACLSKGVTFVMSPLLSLIEDQVTQLLKAPCGGIPAAHMTSATPGTAMKQIYKDLGRADKGREPSVKLVYVTPERLGNSETMLQFMHRLNDKGMLARFVIDEAHCVSSWGHDFRPDYSKLGHFKKAFPRVPVIALTATATPAVRADVIKSLKLNNPQQFIQSFNRTNLVFRVEEKPDKIGD---AMAYVADFISRQNANSRGREVCGIVYCMTQK 1050
            D  +P +L+  ANR++FGN++FR  Q +V+ AT+ G DCFVLMPTGGGKSLCYQLPA LS GVT V+SPLLSLI+DQVT L++ P  GIPAA +TS T  T  + I  +L R      PS+KL+Y+TPE++  SE M   +  L+   MLARFVIDEAHCVS WGHDFRP+YS+LG  KK +P VP++ALTATA P V   V +SL+++N   F  SFNR NL F V +KP  +G    A+  + + IS+    +  R+  GIVYCMT++
Sbjct:  127 DMTEPQDLLARANRKVFGNESFRQNQRQVMEATMRGEDCFVLMPTGGGKSLCYQLPAVLSAGVTIVVSPLLSLIQDQVTALIQNPRCGIPAAFLTSQTALTLKRAITAELRRP----VPSLKLLYLTPEKIVKSEEMADLLLTLHRNKMLARFVIDEAHCVSQWGHDFRPEYSQLGMLKKTYPDVPLMALTATAPPKVIQGVQRSLRISNGPVFSMSFNRQNLTFEVRDKP--LGSDVKALEALYELISK----TYPRDAVGIVYCMTKQ 386          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7597.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
ATP-dependent4.210e-16683.16DNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
DNA7.700e-10760.87helicase n=1 Tax=Tribonema minus TaxID=303371 RepI... [more]
Bloom4.420e-8655.13syndrome protein, DEAD/DEAH box helicase (Fragment... [more]
ATP-dependent8.850e-8356.70DNA helicase n=1 Tax=Pythium insidiosum TaxID=1147... [more]
ATP-dependent1.450e-8254.37DNA helicase n=1 Tax=Globisporangium ultimum (stra... [more]
ATP-dependent2.740e-8254.17DNA helicase n=1 Tax=Phytophthora ramorum TaxID=16... [more]
ATP-dependent3.240e-8252.46DNA helicase n=1 Tax=Peronospora effusa TaxID=5428... [more]
ATP-dependent4.620e-8255.56DNA helicase n=13 Tax=Phytophthora TaxID=4783 RepI... [more]
Uncharacterized2.740e-8154.79protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
ATP-dependent4.570e-8153.33DNA helicase n=4 Tax=Phytophthora TaxID=4783 RepID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs7597contigH-canaliculatus_M_contigs7597:25..4626 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LU42
PFAMsDEAD,Helicase_C,RecQ_Zn_bind
Model size1050
Max annot lvl2759|Eukaryota
KEGG koko:K10900,ko:K10901
KEGG Pathwayko03440,ko03460,map03440,map03460
KEGG ModuleM00295,M00414
Hectar predicted targeting categoryother localisation
GOsGO:0000724,GO:0000725,GO:0001101,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007154,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009266,GO:0009378,GO:0009409,GO:0009414,GO:0009415,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0010035,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0031668,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0042221,GO:0042623,GO:0042631,GO:0043138,GO:0043140,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0070417,GO:0070887,GO:0071103,GO:0071214,GO:0071229,GO:0071462,GO:0071496,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0104004,GO:0140097,GO:1901360,GO:1901363,GO:1901700,GO:1901701
Exons6
Evalue6.9e-167
EggNOG OGsCOG0514@1|root,KOG0351@2759|Eukaryota
Ec32 ortholog descriptionDEAD box helicase
Ec32 orthologEc-16_000130.1
EC3.6.4.12
Descriptionfour-way junction helicase activity
Cds size1050
COG categoryL
BRITEko00000,ko00001,ko00002,ko01000,ko03032,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs7597.1.1prot_H-canaliculatus_M_contigs7597.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs7597 25..4626 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854097.3662262-CDS-H-canaliculatus_M_contigs7597:24..3571696854097.3662262-CDS-H-canaliculatus_M_contigs7597:24..357Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7597 25..357 +
1696854097.3849292-CDS-H-canaliculatus_M_contigs7597:1288..14531696854097.3849292-CDS-H-canaliculatus_M_contigs7597:1288..1453Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7597 1289..1453 +
1696854097.4003322-CDS-H-canaliculatus_M_contigs7597:2620..28121696854097.4003322-CDS-H-canaliculatus_M_contigs7597:2620..2812Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7597 2621..2812 +
1696854097.415913-CDS-H-canaliculatus_M_contigs7597:3301..34511696854097.415913-CDS-H-canaliculatus_M_contigs7597:3301..3451Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7597 3302..3451 +
1696854097.4333105-CDS-H-canaliculatus_M_contigs7597:3776..39491696854097.4333105-CDS-H-canaliculatus_M_contigs7597:3776..3949Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7597 3777..3949 +
1696854097.4536016-CDS-H-canaliculatus_M_contigs7597:4589..46261696854097.4536016-CDS-H-canaliculatus_M_contigs7597:4589..4626Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7597 4590..4626 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs7597.1.1

>prot_H-canaliculatus_M_contigs7597.1.1 ID=prot_H-canaliculatus_M_contigs7597.1.1|Name=mRNA_H-canaliculatus_M_contigs7597.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=350bp
AAGGVSNGFGAPFGSTSRSGSGGVSDTNLSMGGNIRSNGGNRRSAAAGGG
GSSSGNSSGRNSWTNSKMGPWVRRPTERAICAEDGYDPLELMEEANREIF
GNDAFRGVQEEVIRATLCGRDCFVLMPTGGGKSLCYQLPACLSKGVTFVM
SPLLSLIEDQVTQLLKAPCGGIPAAHMTSATPGTAMKQIYKDLGRADKGR
EPSVKLVYVTPERLGNSETMLQFMHRLNDKGMLARFVIDEAHCVSSWGHD
FRPDYSKLGHFKKAFPRVPVIALTATATPAVRADVIKSLKLNNPQQFIQS
FNRTNLVFRVEEKPDKIGDAMAYVADFISRQNANSRGREVCGIVYCMTQK
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mRNA from alignment at H-canaliculatus_M_contigs7597:25..4626+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs7597.1.1 ID=mRNA_H-canaliculatus_M_contigs7597.1.1|Name=mRNA_H-canaliculatus_M_contigs7597.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=4602bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7597:25..4626+ (Hapterophycus canaliculatus Oshoro7m male)
GCAGCCGGAGGGGTGTCAAACGGGTTCGGTGCACCTTTCGGCAGCACTAG TAGAAGTGGGTCCGGCGGCGTTTCCGACACCAATTTAAGCATGGGCGGGA ATATTCGCAGCAACGGGGGCAACAGGCGGAGCGCTGCCGCTGGCGGCGGC GGTAGCAGCAGCGGCAACAGTAGCGGCAGAAATAGCTGGACCAATAGCAA GATGGGGCCGTGGGTACGAAGGCCAACGGAGAGAGCCATCTGTGCGGAGG ATGGGTACGACCCGCTTGAGCTTATGGAGGAGGCGAATCGAGAGATCTTT GGGAACGATGCCTTTCGAGGGGTTCAGGAGGAGGTGAGTTCTGTGCAATC CAATCATCATGCCGGTTCGAATCAGCAGCCTCTCTTGACGTTTATGACTT TGTCGTTGTTGTTGTCGTTGTCGTCGTCGTTGTTGTCCTCGCTGTCGACG TTATTATCGATGTCAGTGTTTGGCGGCTGTTGCTATTCTTGCTTGAATCT GGGATCTTAACAATTGCGATCGTGTGTAGCCCTCGATCGTCTCCAGCCTG TAGCACCTCAATACAATTCGAATCGTCGGCCAAGAATCCATGTGCAACGA GGCCAACACGAAGAAGGTAGACGTTGTTCGGTGCTGGGTAGAGATATGAA GGTCAAGGTCAAGGTCAAGGTGCTGGGTAGAGATCAGAACCCTCTTCGGT GTCAAGACAACGCGGCAAGAACAGCAGCCACAACGACAACAACGACAACA ACGACAACAACGACAACAACGAAAGCGATAGTAGGCAAGCCGTCGGAGGC GTGATGATCAACACGCACGCACCTGTGCCTGCAAGCTACCGGCACCTAAA GTAGGCGTCGTTGCGTCGCGGCGAGCGAAGGGGCTCCTCATGCTCGGCTT GACATCTCGCACCTCCCGCATGGCGCCCGTGATGTCGCCTCCGTCTTTGT TTGTGTGGTCGATTCACTCTTAAACCTTGCCTGTCCCGTTCGCAATACCC ACCTGCATGTCCTTACCGACGAAGACAGGAGTGAGGTAGGATTCCGTCTT GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT GTGTGTGTGTGTGTGTGGATGTGTGTTTGTGGGTGGATGTGGGTGTGTTC TGACGTTGCAGCATATCCTTGCGTGTTTCCTTCTCTCTTGCCCTCGTTGG TGGTTGCCACGCAGGTAATCCGGGCGACGCTGTGCGGGCGCGACTGCTTC GTCCTCATGCCCACCGGGGGAGGAAAGTCTCTGTGCTACCAGCTACCGGC GTGTCTCAGCAAGGGAGTGACGTTCGTCATGTCCCCTCTGCTTTCCCTCA TCGAGGATCAGGTCACACAGCTGCTCAAGGTTCGCGCCTCTGCATGTGAC GATTGTTTTGTCCTGCGCTTGATTCATTCCGCGGTTTCAATTCCTTCCCG GTCTTGGATTTAGTAGCCTATCCTCTTGTGAACCAAACAAAAAAGGCTCA TGTCCCAAGATCCCTCCTTCCTATCACGCTTGCGTGCATACAAGGGTGTA CGAATTCGAGGTATTTTCGTTGGCAGTACAACTTGTACAACCCCTGATAA AGAGGATAGTCGCCTGCATGCACCTTATCGTCCGGGTCACTACAGTATCT GCTTCTTTCTGCTCGACCACTGACATGCTCTCGAGATGGGCTATTCCAAG TGCTGCATACCAAGTACTGCCTGGACTACAGTGAACTCTTTCACTTACTT GAAGTCTTCGCGTCTCATCACCGGAAGTATCTTTCGAGGGTCTACATTCT CACATATTAAACTCGAAGTATGGCCTAGTTCACGATGATAACAAGCCGAT TTTCGAAGTGATGTGTGTTTTAGTACCTGAAATTGCGGTAAGTTACAAAA AGATCTGTTCGGTTCATGCTTTTGTCCCAACCTTACACATCAATGAACTC TCAGTGTTTTGAGCTCAACAGAAGCCTCGAGCTACGCCTCGCACGACGTA TCTCAGGAAGTGTTCCAACGGTGTTGTTATGTTTTCTTTTCAAAAAAGTC CCTACCAAACCGCCTTCATATCCGATACGGCTTGTTTGTGCATCTCAGGC CCCATTCTGAGCCAAGCGAAGGGTGCTCTGATCAACTCCTCGTATCATAT ACCTGGTACGATACGTTTTTGACGCGTCCGAAAAACGTCCACCTAAACGA CATTTAGTACTGTTTCCTCCATCCTCTATCCACACTCGATTCTGCTTCCG GCCTTGGATTGTTCATGTCGGCTCCATCAAGGCTGTCTCCGAGTGTTTTC GATCACGCGACTTTCCAAGGTTTCAACAAAATCAGCTCATGCCACAAACT CTCGGGTCGTCCACGCGCGATGCAAAGTTGCCTCCTGTGTGGTTTCACCA GCGAATCCACTTTTTTCATGATGGCATGCAAAGCAACGGGAAACTAAGTT TCTCGAGGCTAGCTGAAACTGTTTTCGAAACAACAACAACAACAACAACA TCAACAACAACAACAACCACAACCACAACAACATCTACAACAACAGGCAC CGTGTGGAGGCATTCCAGCAGCGCACATGACGAGCGCTACCCCAGGAACC GCGATGAAGCAGATCTACAAGGACCTCGGGAGGGCAGACAAAGGACGGGA GCCGAGCGTCAAGCTGGTGTACGTCACGCCGGAACGGTTAGGCAACTCGG AGACCATGCTGCAATTCATGCACCGCCTCAACGACAAGGTGGTTTATTCT TGTTCTTGTTTCTGGTGCGAGTACATCGCAAAAATCTCAGCTGGCGGTCA CGCTCAAGTTTGCCGAACTCAAAGGCGATGCCATAAGGACAGAGGAGGGC AAACATCGCACAAGTAAACAGGGCACCAAGGCACGCCCACGAAGAAGGAA GCAAAAGCGACAGCCGCGGCCCAGTGGGGAAATTCAAGGGAGGACGGGAG GAAGGAAGGAAGAATGTATTTTCGATTCCAACGGGAACAAGCATAACGCG GCCCAAAGACGAGAACCTCTGCTTGGATGGTGCTATTGACCGTCCTCTTT GTTTCCTATTTCATTTTTGCCATGAACGAAAAGAGTAAATAAAACACTCC GTACAAGGAGTGCAGAAAAAAGTGTTGGAAGAAAGACCGACGAAGGAGGA GAAACAGCTCCAACCTTCTCCCGCTCGCCTCGCTCTGTGCTCCTTGCTCT TTGGCGCCTGCTACGCCTTGTGTCCAGGGCATGCTGGCTCGGTTTGTCAT TGACGAAGCGCACTGCGTATCCTCCTGGGGCCACGACTTCAGGCCCGACT ACTCTAAGCTGGGCCACTTCAAGAAGGCGTTTCCGAGGGTGCCGGTCATT GCCCTCACTGCCACGGCAACTCCGGCGGTACGCAAAAAGCACTCCAACGC AATTGCTTGCACCTTTCGGTGTATCATGTGGAGGCAACCGCCGGGGTCAC GCAGGACTGGGAGATTGAAAATAGCTTTTATCGGCAGGGGTTTAGAACAG AGCCGACAACCGTAGGCCCAAAAAAAATGAAAAGCGCTCACCTAGATGAT TGAACAGAGCGGGGACGACACGTGCTTGGACCTCGAGGACAAATCGGTAC TCCACACGGGACCGTCCTCTCCTCACGTTGCTGTATCCGCTCTCGAGCAC GGTACACTGTACTTGTAACGCCTGCTGGGGCCTGGCGCCTTCTCCGTGGC AGGTGAGGGCGGACGTGATCAAGAGCTTGAAGCTCAACAACCCGCAGCAG TTCATCCAGAGCTTCAACCGCACCAACCTCGTCTTCCGCGTGGAGGAGAA GCCGGACAAGATCGGGGACGCCATGGCCTACGTGGCTGACTTCATCTCCA GGCAGAACGCGAACAGCCGCGGACGGTGCGTCAAACCCGTGGCGTGTGGG TTTGTCGGTGACTGACGCACCTGCACCACCAACAGCGTTAGCGATAACAA CATCAACGGAAACAACAAACAAAAAGGCAGGATTCGACACGAGCGAGGCG CTGGAGCATTGTGAAGAACACCACCATCAGCAAATGTGGTCCATTTTGAC TACATTTGTTTGCCAGACGGTTAGGGTTGCGCATGTAGCACTGCCGTACG TGGGGTGCCCTTTTTTTCTTCTGGACCTGTGAAGAACACCACCAACAGCA AATGTGGTCCATTTTGACTGCGTTTGTTTGCCAAAGGGTTAGGGTTGCGC GTGTAGCACTGCCGTCCGTGGGGTGCCCTTTTTTTCTTCTGGACCTTTGT TCATCGTGCTGTCATGCTGCAACTACACCAAGGGACGGTAATGTGAGATA GATCCCTCCTCCTGCACGGTCGATTTTGATGGTGCTGTACCTCCGTGATG TGTGGAGGCAGTAACAGCCACGGCATTATCGGGAAGATCTTGCCGAAAAA CTCGTTCTGCCGCAGTTCTCCGCCCTCGCCTTCCCCCCCCACCCCAACAC GCCATTTGCCGTTTCCCCTCCCACGGACCCCGTCTTGCTGCGTTCCTGAT GTTTCGAACACAAAGGGAAGTCTGCGGCATCGTCTACTGCATGACCCAAA AG
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7597:25..4626+

>mRNA_H-canaliculatus_M_contigs7597.1.1 ID=mRNA_H-canaliculatus_M_contigs7597.1.1|Name=mRNA_H-canaliculatus_M_contigs7597.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=1050bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7597:25..4626+ (Hapterophycus canaliculatus Oshoro7m male)
GCAGCCGGAGGGGTGTCAAACGGGTTCGGTGCACCTTTCGGCAGCACTAG
TAGAAGTGGGTCCGGCGGCGTTTCCGACACCAATTTAAGCATGGGCGGGA
ATATTCGCAGCAACGGGGGCAACAGGCGGAGCGCTGCCGCTGGCGGCGGC
GGTAGCAGCAGCGGCAACAGTAGCGGCAGAAATAGCTGGACCAATAGCAA
GATGGGGCCGTGGGTACGAAGGCCAACGGAGAGAGCCATCTGTGCGGAGG
ATGGGTACGACCCGCTTGAGCTTATGGAGGAGGCGAATCGAGAGATCTTT
GGGAACGATGCCTTTCGAGGGGTTCAGGAGGAGGTAATCCGGGCGACGCT
GTGCGGGCGCGACTGCTTCGTCCTCATGCCCACCGGGGGAGGAAAGTCTC
TGTGCTACCAGCTACCGGCGTGTCTCAGCAAGGGAGTGACGTTCGTCATG
TCCCCTCTGCTTTCCCTCATCGAGGATCAGGTCACACAGCTGCTCAAGGC
ACCGTGTGGAGGCATTCCAGCAGCGCACATGACGAGCGCTACCCCAGGAA
CCGCGATGAAGCAGATCTACAAGGACCTCGGGAGGGCAGACAAAGGACGG
GAGCCGAGCGTCAAGCTGGTGTACGTCACGCCGGAACGGTTAGGCAACTC
GGAGACCATGCTGCAATTCATGCACCGCCTCAACGACAAGGGCATGCTGG
CTCGGTTTGTCATTGACGAAGCGCACTGCGTATCCTCCTGGGGCCACGAC
TTCAGGCCCGACTACTCTAAGCTGGGCCACTTCAAGAAGGCGTTTCCGAG
GGTGCCGGTCATTGCCCTCACTGCCACGGCAACTCCGGCGGTGAGGGCGG
ACGTGATCAAGAGCTTGAAGCTCAACAACCCGCAGCAGTTCATCCAGAGC
TTCAACCGCACCAACCTCGTCTTCCGCGTGGAGGAGAAGCCGGACAAGAT
CGGGGACGCCATGGCCTACGTGGCTGACTTCATCTCCAGGCAGAACGCGA
ACAGCCGCGGACGGGAAGTCTGCGGCATCGTCTACTGCATGACCCAAAAG
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