mRNA_H-canaliculatus_M_contigs7570.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs7570.1.1
Unique NamemRNA_H-canaliculatus_M_contigs7570.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs7570.1.1 vs.
Match: Deoxyuridine (5'-triphosphate nucleotidohydrolase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G905_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 1.500e-32
Identity = 68/117 (58.12%), Postives = 88/117 (75.21%), Query Frame = 1 
Query:    1 VTELSETTRGSGGFGSTGVEQSTLQTSTAVVNGAKKVKVAESEPISTKAARVTRLLRLVDQVKQLDLEEGSEVVTKLRRSALSNPCSLEPSLVGALEIFKETEDKTTLLENLELITT 351
            VTELSETTRGSGGFGSTGVEQ  LQ+S+ V NGAKK+KV  SEP+S  +A V ++LRL+D+V +LD+++   +V KLR++A+S P SLE  LVG LEI+ ET D   L +NL  + T
Sbjct:  159 VTELSETTRGSGGFGSTGVEQGALQSSSTVANGAKKIKVVGSEPVSRASATVAKVLRLIDRVDKLDVDDAPTLVAKLRKAAMSRPSSLEDLLVGILEIYDETGDTKALNKNLMAVVT 275
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7570.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Deoxyuridine1.500e-3258.125'-triphosphate nucleotidohydrolase n=2 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs7570contigH-canaliculatus_M_contigs7570:677..3710 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7G905
Preferred nameDUT
PFAMsdUTPase
Model size705
Max annot lvl2759|Eukaryota
KEGG rclassRC00002,RC00010
KEGG koko:K01520,ko:K21286
KEGG ReactionR02100,R11560,R11896
KEGG Pathwayko00240,ko00983,ko01100,map00240,map00983,map01100
KEGG ModuleM00053
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000287,GO:0001889,GO:0003674,GO:0003824,GO:0004170,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006259,GO:0006260,GO:0006281,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0007275,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009059,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010469,GO:0010646,GO:0010648,GO:0014070,GO:0015949,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019103,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0022607,GO:0023051,GO:0023057,GO:0030545,GO:0030547,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032552,GO:0032556,GO:0033554,GO:0034404,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0036094,GO:0042221,GO:0042802,GO:0042975,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043393,GO:0043497,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0048513,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048731,GO:0048732,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051098,GO:0051259,GO:0051260,GO:0051716,GO:0055086,GO:0061008,GO:0065003,GO:0065007,GO:0065009,GO:0070013,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0072527,GO:0072528,GO:0072529,GO:0090304,GO:0090407,GO:0097159,GO:0097367,GO:0098772,GO:1901135,GO:1901136,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:2000272
Exons3
Evalue9.25e-35
EggNOG OGsCOG0756@1|root,KOG3370@2759|Eukaryota
Ec32 ortholog descriptiondUTPase-like
Ec32 orthologEc-15_002400.1
EC3.5.1.122,3.6.1.23
DescriptiondUTP metabolic process
Cds size354
COG categoryF
BRITEko00000,ko00001,ko00002,ko01000,ko03400
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854094.0560553-UTR-H-canaliculatus_M_contigs7570:676..10251696854094.0560553-UTR-H-canaliculatus_M_contigs7570:676..1025Hapterophycus canaliculatus Oshoro7m maleUTRH-canaliculatus_M_contigs7570 677..1025 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854094.0689876-CDS-H-canaliculatus_M_contigs7570:1025..11511696854094.0689876-CDS-H-canaliculatus_M_contigs7570:1025..1151Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7570 1026..1151 -
1696854094.0802867-CDS-H-canaliculatus_M_contigs7570:1407..15031696854094.0802867-CDS-H-canaliculatus_M_contigs7570:1407..1503Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7570 1408..1503 -
1696854094.092718-CDS-H-canaliculatus_M_contigs7570:3578..37101696854094.092718-CDS-H-canaliculatus_M_contigs7570:3578..3710Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7570 3579..3710 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs7570.1.1prot_H-canaliculatus_M_contigs7570.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs7570 1026..3710 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs7570.1.1

>prot_H-canaliculatus_M_contigs7570.1.1 ID=prot_H-canaliculatus_M_contigs7570.1.1|Name=mRNA_H-canaliculatus_M_contigs7570.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=118bp
VTELSETTRGSGGFGSTGVEQSTLQTSTAVVNGAKKVKVAESEPISTKAA
RVTRLLRLVDQVKQLDLEEGSEVVTKLRRSALSNPCSLEPSLVGALEIFK
ETEDKTTLLENLELITT*
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mRNA from alignment at H-canaliculatus_M_contigs7570:677..3710-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs7570.1.1 ID=mRNA_H-canaliculatus_M_contigs7570.1.1|Name=mRNA_H-canaliculatus_M_contigs7570.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=3034bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7570:677..3710- (Hapterophycus canaliculatus Oshoro7m male)
GTCACAGAGCTCTCAGAAACAACCAGGGGCAGCGGGGGCTTTGGAAGTAC
TGGCGTTGAGCAATCCACTCTGCAAACTTCAACTGCGGTAGTGAACGGAG
CAAAAAAAGTCAAGGTGGCTGAGTCTGAGCCGGTGAGAGCATTATTTTTG
GTACATGCTGTGATCACATTTGGACAGTCACACACAAGGTCTATGTAGTA
TCTAAAAATTCAACCTCGACAGACAAGACGAGTTAACCGTCAGAAACACA
CGCCCTTTTCTTGCTTTGATGGTGTAAGGGCTGCTGTTAACGAGGTTCGG
AAAATCATGGTTCAATACCCACAAAATCAACATCATTTTGGCCGCTTCCC
GGCGCCGCTTTAGCTTTAAGCGATTCCAAGGCAATGATGAATGTCTTGTT
CTCACGCAAAGAAAGAGATAGCAAAACGCAAACGCTAAGAAAAGGCTTGA
CAGACTGCGTTACATTCGACAGAAGAACTGGTAAAATAGGACACCTGCAT
TTTGAAAGAGACAACCTGACTGCAATAGAGAAGGGCACATTACATGGAGG
CGACTGAATCTCCGAAACGACATGACACCTTTGATATGATACGTTGAAAG
AGACAACATGGCTACACTAAGGAAGAACACAGAGCGAAGCGCGAGTCTTT
AGACCGGGTTATCGGAACACACACACGGAGAAGAGCCATTGCCATGGGAA
TGCTCCAACACTCCACAACAATTTATTCCGCTCCGCCAAAAATACACTGA
GGCACACACGGGGATTCCTGCTGAGTGCCTTCAGAGAGGTAGAGGGGGAA
AGAGAAAGAGAGAGAGACTTAGAATGAACGTTAGAGGCTGGAATTGTGAC
GGTGTTGAGGAGTGGCCACCACTACTGCTGAGTGAATGCTCAAAATTTAA
ATACTCCGGAGTATATTTTATTTTTTCCACAATTTCCGCCACACGCAAGA
AACAAATTGCGGCGCATTCGTGTTGTGCTGACTGCCCCCATATAGAAACA
CGGAGACAGACAGACAGACAGACAGAATGTCTGAACTGTGTGTGTAGATT
GAGAGAATGAGAGACAAAGATAAGAGACAGAAACAGCAGTCAAACTTCTG
TGGAGGGTGGGGGTCAGAAAGCCGGGTAAGAGTAGAGAAAGGAGGGCGGC
TCTTAAAAAAAATTCCGAAGTTCGGGAGAGGAAATCCGGCTCTCACACCA
GTCAGGCTCCGGCGATTCTGGCGGAAAGATAATTGAAAAATACGCATGAG
TACAATCAAGTCAACCGTATCAGATGTATTATCCCTCGGAGGATGTTATG
AACTGGCAGGGTGAAAACCCTTGATGTGGATCCTCGGGGCCCCCAATGTC
GTTGGAATATCCGTCGGGAGGAAATGTTCAGTTGTATGGCAAAATCTCTC
CACACAGAGAAGCAAAGGCCATGCGAAGGCCGCCCCTTGGAGCTGTGTCA
TGTGGTTGTTCTCTGGGTCCCGACTTTTCAAAAGGCAGGGCTGCTACCGT
CGCGTCGAAAATCGATGGAAAGTGCAACGCAAGTTAAGAGTCACCTGCTA
ATGTTCGGACACTTGGCGTTGTGTTTTGAAAAGTGCAAGTTCAGTTTTCC
GGTGGCACCTTTTGAAACAAAGGGGGAAGAGCCATGACAGGGCTAGTCTT
AGAAGTTGTGATCCATGTAGATCGCCGAGTTTCCGACGCCGTAGAAAGAA
AGTTGTAACTACCCATGGCGTTACCCAGGGACCAAAAATGGAGCCTATAC
TGACTGCGGACAAAATTTCAAACTTGGAAGAGGTCGACAACTTCATTCGA
CAATTTCATTCATATCTCGCCGGAACAACAACCGTCTATGCTGACTAGGG
GCTTCCCGAAGAGGGGACGTTGTGGACACCAACCGATGGCCACCGACAGA
GGTCGTCATGTTTCCATCGTGTCGTTGGGATGGTCACATACATCTGCCCG
GCTGGAGAGAGCCCAGCAAGTCTCACCGCACCTACCTGCCTCCGTCCCGG
CTTCCCTCCTTGGAGAAAGCCTTCCAGCACCATCACTCCTCAATAATGAT
GTAATGATCGTGTAAATAGCACCTCATCAAAGGGAGTACCAACATGCGCC
ATAACTATGCGTGAGTCGTAAGAACCACCAGTTCAGATGCTCCGCAATCA
AAGCTAACATTGCGAGCTTTGATTTTCTTTGCGTCTTCGGTGTTGTCGAA
CCGCTAGATTTCCACGAAGGCGGCTCGAGTCACGCGACTACTCCGACTTG
TTGATCAGGTCAAGCAGCTGGATCTCGAAGAAGGCTCCGAGGTGGTCACC
AAGGTGAGTGCTCATGTTCAGCTCTCCCAATCTGCTCTCTTCCGACGCAA
CCCCGGATGTGAAAATTTCGCCTTAATCTAGCAGTACGGCGAAGCCGATC
TCGCCCTTGACCGAAGTCGTCGACGTCGACGTCGTAGGATCTCGTGTGAG
ACGATAGACCGATGCTCTCGTGCTTCACATAATTACGACCGGACAATACA
ACACCATTTTCCCGTCTGTCGTGTGTCTTGCCCTTTTCTGCGTGTCCAAT
GCATGGAAGTTGAGGAGAAGTGCACTTTCCAACCCCTGCTCGCTGGAACC
TTCCCTCGTCGGTGCTTTGGAGATTTTCAAGGAGACCGAGGACAAGACAA
CGCTGTTGGAGAACCTCGAACTTATCACGACATGAAACCCCATGAGTTGG
AATGTCAATGCGGTCTGTGCCGAACGAAAGATGGGCGATTTGGGAACGAG
GGAGCTCTCACGCCCGAGCCGGCATTTTGTGCTGTGGCATTAGATGCCCT
TCTGAAAGCGTAAGATATCTGCCTGTATGCTAGTGACCTTGGCCAATGTG
CACACATAGTTGGCGATCCTGGTCTTCTGGGGAGGGCGCACGCTCTAGGA
CAGCTTGCATGCCGAGCACGTCAGGGTGCGCGGTTGCTCGTTCGTACTGA
GCTGCATTTAAGGATCACAATGAAAGCCGCCTGATTGCGCTTTCTGCCAC
TTCACGCCCAATTGCGGATGACTACCGCAACCCG
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7570:677..3710-

>mRNA_H-canaliculatus_M_contigs7570.1.1 ID=mRNA_H-canaliculatus_M_contigs7570.1.1|Name=mRNA_H-canaliculatus_M_contigs7570.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=354bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7570:677..3710- (Hapterophycus canaliculatus Oshoro7m male)
GTCACAGAGCTCTCAGAAACAACCAGGGGCAGCGGGGGCTTTGGAAGTAC
TGGCGTTGAGCAATCCACTCTGCAAACTTCAACTGCGGTAGTGAACGGAG
CAAAAAAAGTCAAGGTGGCTGAGTCTGAGCCGATTTCCACGAAGGCGGCT
CGAGTCACGCGACTACTCCGACTTGTTGATCAGGTCAAGCAGCTGGATCT
CGAAGAAGGCTCCGAGGTGGTCACCAAGTTGAGGAGAAGTGCACTTTCCA
ACCCCTGCTCGCTGGAACCTTCCCTCGTCGGTGCTTTGGAGATTTTCAAG
GAGACCGAGGACAAGACAACGCTGTTGGAGAACCTCGAACTTATCACGAC
ATGA
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