mRNA_H-canaliculatus_M_contigs75563.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs75563.1.1 vs.
Match: Sugar (ABC transporter substrate-binding protein n=1 Tax=Sulfitobacter sp. TaxID=1903071 RepID=A0A3D2FCX4_9RHOB) HSP 1 Score: 306 bits (785), Expect = 4.300e-102 Identity = 150/179 (83.80%), Postives = 168/179 (93.85%), Query Frame = 1
Query: 1 GLTVWENVDDGLLSDTGTSATILEEVQVDGAGFIFVPYAGRIRAAGNTPDAIRRIITAKLADQTPDPQVQVRRVAGDGSTVSLVGSIGGQGVFAIERPTRTLSTMLARAGGITIQPEIAQVTVIRGKERGKIWFQDLYDHPELDIALRAGDRILVEEDTRAFTALGATGGQARVPYASQ 537
GLT+WENVDDGLLS+ G SAT+L+E+QVDG+GFIFVPYAGRIRA+GNTP+AIRRIIT KLA+QTPDPQVQVRR+AGDGSTVSL+GSIGGQGVF IERPTRTLSTMLA AGG+TI P+IAQVTV+RGKE GKIWFQDLYDHPELDIALRAGDRILVE DTR+FTALGATG Q+ VP+ +Q
Sbjct: 73 GLTIWENVDDGLLSNEGASATLLDEIQVDGSGFIFVPYAGRIRASGNTPEAIRRIITTKLAEQTPDPQVQVRRIAGDGSTVSLIGSIGGQGVFPIERPTRTLSTMLANAGGVTIAPDIAQVTVLRGKESGKIWFQDLYDHPELDIALRAGDRILVEGDTRSFTALGATGSQSLVPFETQ 251
BLAST of mRNA_H-canaliculatus_M_contigs75563.1.1 vs.
Match: Polysaccharide (biosynthesis/export protein n=2 Tax=Rhodobacterales TaxID=204455 RepID=A0A221K2V6_9RHOB) HSP 1 Score: 306 bits (784), Expect = 1.050e-101 Identity = 154/179 (86.03%), Postives = 166/179 (92.74%), Query Frame = 1
Query: 1 GLTVWENVDDGLLSDTGTSATILEEVQVDGAGFIFVPYAGRIRAAGNTPDAIRRIITAKLADQTPDPQVQVRRVAGDGSTVSLVGSIGGQGVFAIERPTRTLSTMLARAGGITIQPEIAQVTVIRGKERGKIWFQDLYDHPELDIALRAGDRILVEEDTRAFTALGATGGQARVPYASQ 537
GLT+WENVDDGLL+ +AT LEEVQVDGAGFIFVPYAGRIRAAGN+P+AIRRIITAKL +QTPDPQVQVRRVAGDGSTVSL+GSIGGQGV+AIERPTRTL MLARAGG+TI+PEIAQVTV RG +RGKIW QDLYDHPELDIALR GDRILVEEDTRAFTALGATGGQARVP+ SQ
Sbjct: 90 GLTIWENVDDGLLAGEMQNATQLEEVQVDGAGFIFVPYAGRIRAAGNSPEAIRRIITAKLEEQTPDPQVQVRRVAGDGSTVSLIGSIGGQGVYAIERPTRTLGAMLARAGGVTIEPEIAQVTVTRGGQRGKIWLQDLYDHPELDIALRGGDRILVEEDTRAFTALGATGGQARVPFESQ 268
BLAST of mRNA_H-canaliculatus_M_contigs75563.1.1 vs.
Match: Polysaccharide (export outer membrane protein n=8 Tax=Sulfitobacter TaxID=60136 RepID=A0A7Z0CHN9_9RHOB) HSP 1 Score: 303 bits (777), Expect = 1.210e-100 Identity = 151/179 (84.36%), Postives = 167/179 (93.30%), Query Frame = 1
Query: 1 GLTVWENVDDGLLSDTGTSATILEEVQVDGAGFIFVPYAGRIRAAGNTPDAIRRIITAKLADQTPDPQVQVRRVAGDGSTVSLVGSIGGQGVFAIERPTRTLSTMLARAGGITIQPEIAQVTVIRGKERGKIWFQDLYDHPELDIALRAGDRILVEEDTRAFTALGATGGQARVPYASQ 537
G+TV+ENVDD LL G+ ATILEEVQVDGAGFIF+PYAGRI+AAGNTPDAIRRIIT KL +QTPDPQV+VRR AGDGSTVSL+GSIGGQGV+ IERPTRTL TMLARAGG+TI+P IAQVTVIRGK+RGKIWF+DLYDHPELDIALRAGDRILVEEDTR+FTALGATGGQA+VP+ SQ
Sbjct: 90 GITVYENVDDPLLGVEGSPATILEEVQVDGAGFIFIPYAGRIKAAGNTPDAIRRIITNKLGEQTPDPQVEVRRAAGDGSTVSLIGSIGGQGVYPIERPTRTLGTMLARAGGVTIEPAIAQVTVIRGKQRGKIWFEDLYDHPELDIALRAGDRILVEEDTRSFTALGATGGQAQVPFESQ 268
BLAST of mRNA_H-canaliculatus_M_contigs75563.1.1 vs.
Match: Sugar (ABC transporter substrate-binding protein n=1 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A350AHS3_9RHOB) HSP 1 Score: 302 bits (773), Expect = 3.130e-100 Identity = 145/179 (81.01%), Postives = 166/179 (92.74%), Query Frame = 1
Query: 1 GLTVWENVDDGLLSDTGTSATILEEVQVDGAGFIFVPYAGRIRAAGNTPDAIRRIITAKLADQTPDPQVQVRRVAGDGSTVSLVGSIGGQGVFAIERPTRTLSTMLARAGGITIQPEIAQVTVIRGKERGKIWFQDLYDHPELDIALRAGDRILVEEDTRAFTALGATGGQARVPYASQ 537
GLT+WENVDDGLL+ G ++T+LEEVQVDGAGFIFVPYAGR+RAAGNTPDA+RR+ITAKL DQTPDPQVQVRR+AGDGSTVSLVGS+GGQGV+AIERPTRTLSTMLARAGG+TI PEIAQ+TVIRG R K+WF+DLY HPE+DIALR GDRILVEED+RA+TALGATG Q R+P+ +Q
Sbjct: 73 GLTIWENVDDGLLASQGLNSTVLEEVQVDGAGFIFVPYAGRVRAAGNTPDALRRVITAKLEDQTPDPQVQVRRLAGDGSTVSLVGSVGGQGVYAIERPTRTLSTMLARAGGVTISPEIAQITVIRGDHRAKVWFEDLYRHPEMDIALRGGDRILVEEDSRAYTALGATGTQNRIPFETQ 251
BLAST of mRNA_H-canaliculatus_M_contigs75563.1.1 vs.
Match: polysaccharide (biosynthesis/export family protein n=1 Tax=Thalassococcus sp. CAU 1522 TaxID=2851652 RepID=UPI001C386A79) HSP 1 Score: 301 bits (771), Expect = 1.300e-99 Identity = 148/179 (82.68%), Postives = 168/179 (93.85%), Query Frame = 1
Query: 1 GLTVWENVDDGLLSDTGTSATILEEVQVDGAGFIFVPYAGRIRAAGNTPDAIRRIITAKLADQTPDPQVQVRRVAGDGSTVSLVGSIGGQGVFAIERPTRTLSTMLARAGGITIQPEIAQVTVIRGKERGKIWFQDLYDHPELDIALRAGDRILVEEDTRAFTALGATGGQARVPYASQ 537
GLT+WENVDDGLL+ +ATILEEVQVDG+GFIFVPYAGRI+A+GNTP+AIRRIIT+KLADQTPDPQV+VRRVAGDGSTVSLVG++GGQGV+AIERPTRTLS+MLARAGGITI+PEIAQVT++RG + GKIWFQDLY HPE DIALR GDRILVEED+RAFTALGATG QARVP+ +Q
Sbjct: 90 GLTIWENVDDGLLATDTANATILEEVQVDGSGFIFVPYAGRIKASGNTPEAIRRIITSKLADQTPDPQVEVRRVAGDGSTVSLVGAVGGQGVYAIERPTRTLSSMLARAGGITIEPEIAQVTILRGHKTGKIWFQDLYQHPEFDIALRGGDRILVEEDSRAFTALGATGTQARVPFETQ 268
BLAST of mRNA_H-canaliculatus_M_contigs75563.1.1 vs.
Match: polysaccharide (export protein n=1 Tax=Tateyamaria sp. Alg231-49 TaxID=1922219 RepID=UPI001900175C) HSP 1 Score: 299 bits (766), Expect = 1.900e-99 Identity = 148/179 (82.68%), Postives = 164/179 (91.62%), Query Frame = 1
Query: 1 GLTVWENVDDGLLSDTGTSATILEEVQVDGAGFIFVPYAGRIRAAGNTPDAIRRIITAKLADQTPDPQVQVRRVAGDGSTVSLVGSIGGQGVFAIERPTRTLSTMLARAGGITIQPEIAQVTVIRGKERGKIWFQDLYDHPELDIALRAGDRILVEEDTRAFTALGATGGQARVPYASQ 537
GLT+WENVD+GLL G +AT LEEVQVDG+GFIFVPYAGRIRAAGNTP+AIRRIIT KL +QTPDPQVQVRR+AGDGSTVSL G++G QGV+AIERPTRTLSTMLARAGG+TI PEIAQ+TVIRG +R +IWFQDL+DHPE DIALR GDRILVEEDTRAFTALGATGGQARVP+ SQ
Sbjct: 90 GLTIWENVDEGLLVGQGQNATALEEVQVDGSGFIFVPYAGRIRAAGNTPEAIRRIITTKLEEQTPDPQVQVRRLAGDGSTVSLTGAVGAQGVYAIERPTRTLSTMLARAGGVTIVPEIAQITVIRGNQRSRIWFQDLFDHPERDIALRGGDRILVEEDTRAFTALGATGGQARVPFFSQ 268
BLAST of mRNA_H-canaliculatus_M_contigs75563.1.1 vs.
Match: polysaccharide (biosynthesis/export family protein n=2 Tax=unclassified Sulfitobacter TaxID=196795 RepID=UPI0015949A23) HSP 1 Score: 300 bits (767), Expect = 4.090e-99 Identity = 145/179 (81.01%), Postives = 168/179 (93.85%), Query Frame = 1
Query: 1 GLTVWENVDDGLLSDTGTSATILEEVQVDGAGFIFVPYAGRIRAAGNTPDAIRRIITAKLADQTPDPQVQVRRVAGDGSTVSLVGSIGGQGVFAIERPTRTLSTMLARAGGITIQPEIAQVTVIRGKERGKIWFQDLYDHPELDIALRAGDRILVEEDTRAFTALGATGGQARVPYASQ 537
GLT+WENVDDGLL++ T+AT LEEVQVDGAGFIFVPYAGRIRAAGN+P+AIRRIIT +L++QTPDPQVQVRRVAGDG+TVSL+GS+G QGV+AIERPTRTLSTMLARAGG++I PEIAQ+TV+RG ERG+IWF+DLYDHPELDIALR GDRILVEEDTR+FTA+GATG Q +VP+ SQ
Sbjct: 90 GLTIWENVDDGLLANEATNATQLEEVQVDGAGFIFVPYAGRIRAAGNSPEAIRRIITERLSEQTPDPQVQVRRVAGDGATVSLIGSVGSQGVYAIERPTRTLSTMLARAGGVSITPEIAQITVLRGTERGQIWFEDLYDHPELDIALRGGDRILVEEDTRSFTAMGATGSQQKVPFESQ 268
BLAST of mRNA_H-canaliculatus_M_contigs75563.1.1 vs.
Match: polysaccharide (biosynthesis/export family protein n=1 Tax=Puniceibacterium confluentis TaxID=1958944 RepID=UPI0011B63060) HSP 1 Score: 300 bits (767), Expect = 4.490e-99 Identity = 148/179 (82.68%), Postives = 167/179 (93.30%), Query Frame = 1
Query: 1 GLTVWENVDDGLLSDTGTSATILEEVQVDGAGFIFVPYAGRIRAAGNTPDAIRRIITAKLADQTPDPQVQVRRVAGDGSTVSLVGSIGGQGVFAIERPTRTLSTMLARAGGITIQPEIAQVTVIRGKERGKIWFQDLYDHPELDIALRAGDRILVEEDTRAFTALGATGGQARVPYASQ 537
GLT+WENVDDGLL+ +++TILEEVQVDG+GFIFVPYAGRIRAAGN+PDAIRR+IT +LADQTPDPQVQVRR+AGDGSTVSLVGS+GGQGV+AIERPTRTLS MLARAGG+TIQPEIAQVTV+RG ++GKIWFQDLY +P +DI LR GDRILVEEDTRAFTALGATG QARVP+ SQ
Sbjct: 90 GLTIWENVDDGLLAGETSNSTILEEVQVDGSGFIFVPYAGRIRAAGNSPDAIRRVITERLADQTPDPQVQVRRLAGDGSTVSLVGSVGGQGVYAIERPTRTLSAMLARAGGVTIQPEIAQVTVLRGGQQGKIWFQDLYKNPRMDIPLRGGDRILVEEDTRAFTALGATGTQARVPFESQ 268
BLAST of mRNA_H-canaliculatus_M_contigs75563.1.1 vs.
Match: Sugar (ABC transporter substrate-binding protein n=7 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A073JGB6_9RHOB) HSP 1 Score: 299 bits (766), Expect = 5.610e-99 Identity = 147/179 (82.12%), Postives = 165/179 (92.18%), Query Frame = 1
Query: 1 GLTVWENVDDGLLSDTGTSATILEEVQVDGAGFIFVPYAGRIRAAGNTPDAIRRIITAKLADQTPDPQVQVRRVAGDGSTVSLVGSIGGQGVFAIERPTRTLSTMLARAGGITIQPEIAQVTVIRGKERGKIWFQDLYDHPELDIALRAGDRILVEEDTRAFTALGATGGQARVPYASQ 537
GLT++ENVDD LL G+ AT LEEVQVDG+GFIF+PYAGRI+A+GNTP+AIRRIIT KLADQTPDPQV+VRRVAGDGSTVSL+G++GGQGV+AIERPTRTL MLARAGG+T+ PEIAQ+TVIRG RGKIW QDLYDHPELDIALRAGDRIL+EEDTRAFTALGATGGQARVP+ SQ
Sbjct: 90 GLTIYENVDDPLLGVEGSPATQLEEVQVDGSGFIFIPYAGRIKASGNTPEAIRRIITGKLADQTPDPQVEVRRVAGDGSTVSLIGAVGGQGVYAIERPTRTLGAMLARAGGVTVAPEIAQITVIRGATRGKIWLQDLYDHPELDIALRAGDRILIEEDTRAFTALGATGGQARVPFESQ 268
BLAST of mRNA_H-canaliculatus_M_contigs75563.1.1 vs.
Match: Polysaccharide (export protein n=1 Tax=Sulfitobacter sabulilitoris TaxID=2562655 RepID=A0A5S3PMQ5_9RHOB) HSP 1 Score: 298 bits (764), Expect = 7.480e-99 Identity = 149/179 (83.24%), Postives = 165/179 (92.18%), Query Frame = 1
Query: 1 GLTVWENVDDGLLSDTGTSATILEEVQVDGAGFIFVPYAGRIRAAGNTPDAIRRIITAKLADQTPDPQVQVRRVAGDGSTVSLVGSIGGQGVFAIERPTRTLSTMLARAGGITIQPEIAQVTVIRGKERGKIWFQDLYDHPELDIALRAGDRILVEEDTRAFTALGATGGQARVPYASQ 537
GLTVWENVDDGLL+ ++TILEEVQVDGAGFIFVPYAGRIRAAGNTP+AIRRIITAKL +QTPDPQVQVRRVAGDG+TVSL+GSIGGQGV+ IERPTRTL+TMLA+AGG+TI+PEIAQVTV R E IWFQDLYDHPELDIALRAGDRILVEEDTR+FT+LGATG Q+RVP+ SQ
Sbjct: 77 GLTVWENVDDGLLAGEAQNSTILEEVQVDGAGFIFVPYAGRIRAAGNTPEAIRRIITAKLEEQTPDPQVQVRRVAGDGATVSLIGSIGGQGVYPIERPTRTLATMLAQAGGVTIEPEIAQVTVTRAGESSTIWFQDLYDHPELDIALRAGDRILVEEDTRSFTSLGATGSQSRVPFESQ 255 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs75563.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs75563.1.1 >prot_H-canaliculatus_M_contigs75563.1.1 ID=prot_H-canaliculatus_M_contigs75563.1.1|Name=mRNA_H-canaliculatus_M_contigs75563.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=179bp GLTVWENVDDGLLSDTGTSATILEEVQVDGAGFIFVPYAGRIRAAGNTPDback to top mRNA from alignment at H-canaliculatus_M_contigs75563:2..538+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs75563.1.1 ID=mRNA_H-canaliculatus_M_contigs75563.1.1|Name=mRNA_H-canaliculatus_M_contigs75563.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=537bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75563:2..538+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs75563:2..538+ >mRNA_H-canaliculatus_M_contigs75563.1.1 ID=mRNA_H-canaliculatus_M_contigs75563.1.1|Name=mRNA_H-canaliculatus_M_contigs75563.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=537bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75563:2..538+ (Hapterophycus canaliculatus Oshoro7m male)back to top |