mRNA_H-canaliculatus_M_contigs7555.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7555.1.1 vs.
Match: TOG (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPV5_ECTSI) HSP 1 Score: 244 bits (623), Expect = 4.920e-70 Identity = 114/143 (79.72%), Postives = 125/143 (87.41%), Query Frame = 1
Query: 1 EETEDEQDREGEDTDY-VARTCQFCGEYDPAFTDEKLDMHYWQNCPLLMSCEECGQVIEISSISEHLLEECQNRESYTECEISRLAIRVEDLSKWQRSKSCRPPGKGGPHSTCPLCFQDVGKADDEYSWRTHLIDSCPQNPRR 426
EET+ Q +E E+ D V+ TCQFCG+YDP+FTDEKLDMHYWQNCPLLMSCEECGQVIEISSI EHLLEECQNRE+YTECEIS LAIR+EDL KWQRSKSC+PPGKGGP STCPLCF+DVG ADDE WR HLID C +NPRR
Sbjct: 715 EETDVGQTKESEEMDDDVSYTCQFCGKYDPSFTDEKLDMHYWQNCPLLMSCEECGQVIEISSIPEHLLEECQNRENYTECEISHLAIRIEDLDKWQRSKSCKPPGKGGPGSTCPLCFEDVGSADDEEYWRAHLIDRCTRNPRR 857
BLAST of mRNA_H-canaliculatus_M_contigs7555.1.1 vs.
Match: TOG (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFJ3_9STRA) HSP 1 Score: 196 bits (497), Expect = 3.020e-52 Identity = 81/123 (65.85%), Postives = 101/123 (82.11%), Query Frame = 1
Query: 58 TCQFCGEYDPAFTDEKLDMHYWQNCPLLMSCEECGQVIEISSISEHLLEECQNRESYTECEISRLAIRVEDLSKWQRSKSCRPPGKGGPHSTCPLCFQDVGKADDEYSWRTHLIDSCPQNPRR 426
TCQFCG++D FT+E+LD+HYWQ CP+LM CEECGQVIEIS++ EHLL+ECQ Y ECE+S +A+R E L++WQRS CRPPG+GG S CPLCF+D+G ADDE WR HLI++CP+NPRR
Sbjct: 762 TCQFCGKFDAEFTEERLDLHYWQACPMLMGCEECGQVIEISALPEHLLDECQEAGKYEECEVSGMAVRREALTEWQRSAHCRPPGRGGIGSVCPLCFKDLGAADDEEVWRAHLIEACPKNPRR 884
BLAST of mRNA_H-canaliculatus_M_contigs7555.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8I8_HETAK) HSP 1 Score: 143 bits (361), Expect = 1.800e-38 Identity = 60/122 (49.18%), Postives = 78/122 (63.93%), Query Frame = 1
Query: 58 TCQFCGEYDPAFTDEKLDMHYWQNCPLLMSCEECGQVIEISSISEHLLEECQNRESYTECEISRLAIRVEDLSKWQRSKSCRPPGKGGPHSTCPLCFQDVGKADDEYSWRTHLIDSCPQNPR 423
TCQFCG DP F +E LD+HYWQ+C +LMSC EC QVIEI+ ++EH L EC+ ++ Y EC++S + ++L +WQ S CRP G C LC + VG + E WR HL C QNPR
Sbjct: 12 TCQFCGARDPDFDEEALDLHYWQDCVMLMSCRECSQVIEIACLAEHYLTECEFKDKYIECDVSGEVVLKDELKEWQASSECRPAADDGGRPRCLLCHRGVGPPEGEEGWRRHLTRDCSQNPR 133
BLAST of mRNA_H-canaliculatus_M_contigs7555.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVW7_9STRA) HSP 1 Score: 130 bits (327), Expect = 5.060e-32 Identity = 60/135 (44.44%), Postives = 83/135 (61.48%), Query Frame = 1
Query: 58 TCQFCGEYDPAFTDEKLDMHYWQNCPLLMSCEECGQVIEISSISEHLLEECQNRESYTECEISRLAIRVEDLSKWQRSKSCRPPGKGGPHSTCPLCFQDVGKADD-------------EYSWRTHLIDSCPQNPR 423
TCQFCG D F + LD+HYW++CP+L+SC EC Q+IE+ ++EHLLEEC+ RE+Y +CE+S A+R+ED + W+ C P G CPLC QD+ DD + +W+ HLI+ CP N R
Sbjct: 118 TCQFCGLEDDDFDEAGLDLHYWRDCPVLLSCTECEQIIEVQGLAEHLLEECEARENYYQCEVSGEAVRIEDEAAWRDGPHCVPMAAGAL-GRCPLCHQDI--IDDPALSGMTVETDVGDAAWQEHLINECPANER 249
BLAST of mRNA_H-canaliculatus_M_contigs7555.1.1 vs.
Match: Centrosomal (protein of 104 kDa n=1 Tax=Takifugu flavidus TaxID=433684 RepID=A0A5C6MN93_9TELE) HSP 1 Score: 129 bits (323), Expect = 5.690e-29 Identity = 57/130 (43.85%), Postives = 81/130 (62.31%), Query Frame = 1
Query: 46 YVARTCQFCGEYDPAFTDEKLDMHYWQNCPLLMSCEECGQVIEISSISEHLLEECQNRESYTECEISRLAIRVEDLSKWQRSKSCRPPGKGGPHSTCPLCFQDVGKADDEYSWRTHLID--SCPQNPRRP 429
++ + C FCGE D +FTDE LD+HYW +CP+L C+EC QV+EI+S++EHLL EC +R + +C A+ EDL + + +C PP G S CPLC + D+ +W+ HL+ C QN RRP
Sbjct: 697 HLDKLCIFCGETDESFTDEGLDLHYWTHCPMLRHCDECKQVVEIASVTEHLLSECGSRSKFRQCVRCSEAVLAEDLPRHAQGPTCNPPTSGKASSHCPLCHNNFMPGDE--AWKAHLMGRGGCKQNSRRP 824
BLAST of mRNA_H-canaliculatus_M_contigs7555.1.1 vs.
Match: (mimic (poison frog) hypothetical protein n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A821MJM6_9NEOB) HSP 1 Score: 119 bits (298), Expect = 1.260e-28 Identity = 51/129 (39.53%), Postives = 83/129 (64.34%), Query Frame = 1
Query: 46 YVARTCQFCGEYDPAFTDEKLDMHYWQNCPLLMSCEECGQVIEISSISEHLLEECQNRESYTECEISRLAIRVEDLSKWQRSKSCRPPGKGGPHSTCPLCFQDVGKADDEYSWRTHLI--DSCPQNPRR 426
Y+ C FCGE D +FT+E LD+HYW+ CP+L CE C QV+EI+S+++HLL EC +++ + +C++ AI + L + ++K+C P + CPLC ++ ++ +W++HL+ D C NPRR
Sbjct: 44 YLDNLCIFCGERDESFTEEGLDLHYWKQCPMLKRCEHCKQVVEIASLTDHLLTECDHKDLFGKCQLCTEAISKDHLLEHVKAKTCNPAKGEKVANRCPLCHENFTPGEE--AWKSHLMGKDGCKMNPRR 170
BLAST of mRNA_H-canaliculatus_M_contigs7555.1.1 vs.
Match: centrosomal (protein of 104 kDa isoform X1 n=2 Tax=Cheilinus undulatus TaxID=241271 RepID=UPI001BD3F157) HSP 1 Score: 127 bits (320), Expect = 1.450e-28 Identity = 57/132 (43.18%), Postives = 88/132 (66.67%), Query Frame = 1
Query: 43 DYVARTCQFCGEYDPAFTDEKLDMHYWQNCPLLMSCEECGQVIEISSISEHLLEECQNRESYTECEISRLAIRVEDLSKWQRSKSCRPP--GKGGPHSTCPLCFQDVGKADDEYSWRTHLI--DSCPQNPRR 426
DY+ C FCG+ D +FT++ LD+HYW++CP+L C+EC QV+EI+S++EHLL EC++R +++C A+ EDL++ + +C PP GKG H CPLC + ++ +W+THL+ + C QN RR
Sbjct: 770 DYLDNLCIFCGKKDESFTEDGLDLHYWKHCPMLKRCDECRQVVEIASLTEHLLGECESRSKFSQCPRCSEAVATEDLARHVQGPACNPPISGKGSNH--CPLCHNNFQPGEE--AWKTHLMGREGCKQNSRR 897
BLAST of mRNA_H-canaliculatus_M_contigs7555.1.1 vs.
Match: centrosomal (protein of 104 kDa-like n=1 Tax=Balearica regulorum gibbericeps TaxID=100784 RepID=UPI0005326A81) HSP 1 Score: 125 bits (313), Expect = 1.760e-28 Identity = 56/130 (43.08%), Postives = 83/130 (63.85%), Query Frame = 1
Query: 43 DYVARTCQFCGEYDPAFTDEKLDMHYWQNCPLLMSCEECGQVIEISSISEHLLEECQNRESYTECEISRLAIRVEDLSKWQRSKSCRPPGKGGPHSTCPLCFQDVGKADDEYSWRTHLI--DSCPQNPRR 426
DY+ C FCGE D +FT+E LD+HYW++CP+L C+ C QV+EI+S++EHLL +C ++S+ +C+ AI EDL K +SK+C P + CPLC + ++ +W++HLI D C N RR
Sbjct: 261 DYLDNLCIFCGERDKSFTEEGLDLHYWKHCPMLTRCQHCKQVVEIASLTEHLLTDCDKKDSFGKCQRCSEAIPKEDLPKHIKSKTCNPAKPENVANHCPLCHDNFSPGEE--AWKSHLIGNDGCKMNQRR 388
BLAST of mRNA_H-canaliculatus_M_contigs7555.1.1 vs.
Match: Centrosomal (protein 104 n=3 Tax=Labrus bergylta TaxID=56723 RepID=A0A3Q3G3Y1_9LABR) HSP 1 Score: 127 bits (319), Expect = 1.960e-28 Identity = 58/131 (44.27%), Postives = 86/131 (65.65%), Query Frame = 1
Query: 46 YVARTCQFCGEYDPAFTDEKLDMHYWQNCPLLMSCEECGQVIEISSISEHLLEECQNRESYTECEISRLAIRVEDLSKWQRSKSCRPP--GKGGPHSTCPLCFQDVGKADDEYSWRTHLI--DSCPQNPRR 426
Y+ C FCG+ D +FT++ LD+HYW++CP+L C+EC QV+EI+S++EHLL EC+NR +++C A+ EDL++ + +C PP GKG H CPLC + E +W+THL+ + C QN RR
Sbjct: 768 YLDNLCIFCGKKDESFTEDGLDLHYWKHCPMLRRCDECRQVVEIASLTEHLLGECENRSKFSQCPRCSEALATEDLARHVQGPACNPPVSGKGSNH--CPLCHNNF--LPGEEAWKTHLMGREGCKQNSRR 894
BLAST of mRNA_H-canaliculatus_M_contigs7555.1.1 vs.
Match: Centrosomal (protein of 104 kDa n=7 Tax=Cyprinoidei TaxID=30727 RepID=A0A3N0YIM0_ANAGA) HSP 1 Score: 127 bits (318), Expect = 2.620e-28 Identity = 53/129 (41.09%), Postives = 87/129 (67.44%), Query Frame = 1
Query: 46 YVARTCQFCGEYDPAFTDEKLDMHYWQNCPLLMSCEECGQVIEISSISEHLLEECQNRESYTECEISRLAIRVEDLSKWQRSKSCRPPGKGGPHSTCPLCFQDVGKADDEYSWRTHLI--DSCPQNPRR 426
Y+ C FCGE D +FT+++LD+HYW++CP+L C +C QV+EI+S++EHLL EC+ R +T+C + A+ ++L++ +S +C PP G + CP+C ++ A E +W++HL+ + C QN RR
Sbjct: 742 YLDNLCIFCGERDVSFTEDRLDLHYWKHCPMLQRCLQCRQVVEIASLTEHLLTECERRADFTQCPLCSEALTRDNLTEHAQSTACNPPASGENCNHCPICHENF--ASGEEAWKSHLMGPEGCKQNSRR 868 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7555.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7555.1.1 >prot_H-canaliculatus_M_contigs7555.1.1 ID=prot_H-canaliculatus_M_contigs7555.1.1|Name=mRNA_H-canaliculatus_M_contigs7555.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=107bp MHYWQNCPLLMSCEECGQVIEISSISEHLLEECQNRESYTECEISRLAIRback to top mRNA from alignment at H-canaliculatus_M_contigs7555:754..2481+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7555.1.1 ID=mRNA_H-canaliculatus_M_contigs7555.1.1|Name=mRNA_H-canaliculatus_M_contigs7555.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=1728bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7555:754..2481+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7555:754..2481+ >mRNA_H-canaliculatus_M_contigs7555.1.1 ID=mRNA_H-canaliculatus_M_contigs7555.1.1|Name=mRNA_H-canaliculatus_M_contigs7555.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=321bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7555:754..2481+ (Hapterophycus canaliculatus Oshoro7m male)back to top |