mRNA_H-canaliculatus_M_contigs7551.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7551.1.1 vs.
Match: LisH (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L023_9PHAE) HSP 1 Score: 355 bits (911), Expect = 8.020e-119 Identity = 174/181 (96.13%), Postives = 179/181 (98.90%), Query Frame = 1
Query: 1 TKLVMIESPTNPMQRIINIPDICRVAHSKNALVEVDSTMMTPCLQKPIVLGADLIVHSATKFISGHADVMAGVVVCKNQELSEQIYFFQNAEGTGLSPFDSWLLLRGIKTMHIRVEKQQENAIRVARFLKAHPCTTHVHYTGLESHPDYDIHMAQASGGGSVVCFRTGSLAFSQHIVTVRR 543
TKLVMIESPTNPMQRI+NIPDICRVAHSK ALVEVDSTMMTPCLQKPIVLGADLIVHSATKFISGHADVMAGVVVCKNQELSEQIYFFQNAEGTGLSPFDSWLLLRG+KTMHIRVEKQQENAIRVARFLKAHPCTTHV+YTGLESHPDYDIHMAQASGGGSVVCFRTGSLAFSQHIV+V +
Sbjct: 267 TKLVMIESPTNPMQRILNIPDICRVAHSKGALVEVDSTMMTPCLQKPIVLGADLIVHSATKFISGHADVMAGVVVCKNQELSEQIYFFQNAEGTGLSPFDSWLLLRGVKTMHIRVEKQQENAIRVARFLKAHPCTTHVYYTGLESHPDYDIHMAQASGGGSVVCFRTGSLAFSQHIVSVTK 447
BLAST of mRNA_H-canaliculatus_M_contigs7551.1.1 vs.
Match: Cystathionine (beta-lyase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Q6_9STRA) HSP 1 Score: 253 bits (645), Expect = 3.870e-79 Identity = 123/178 (69.10%), Postives = 147/178 (82.58%), Query Frame = 1
Query: 1 TKLVMIESPTNPMQRIINIPDICRVAHSKNALVEVDSTMMTPCLQKPIVLGADLIVHSATKFISGHADVMAGVVVCKNQELSEQIYFFQNAEGTGLSPFDSWLLLRGIKTMHIRVEKQQENAIRVARFLKAHPCTTHVHYTGLESHPDYDIHMAQASGGGSVVCFRTGSLAFSQHIVT 534
T+L+M+ESPTNPMQRI++I I +AH+ NA+VE LGAD++VHSATKFISGH+D MAGVVV K++ L+EQ+YFFQNAEGTGLSPFDSWLLLRG+KTMHIRVE+QQ+NA+ VA FL AHP THV+YTGL SHP +D+HM+QASGGGSV+CFRTGSL FSQHIVT
Sbjct: 245 TRLIMLESPTNPMQRILDIRAISTIAHAHNAIVE---------------LGADIVVHSATKFISGHSDCMAGVVVVKDRALAEQVYFFQNAEGTGLSPFDSWLLLRGVKTMHIRVERQQDNALAVANFLSAHPQVTHVYYTGLPSHPGHDLHMSQASGGGSVICFRTGSLPFSQHIVT 407
BLAST of mRNA_H-canaliculatus_M_contigs7551.1.1 vs.
Match: Cystathionine (beta-lyase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8G0_9STRA) HSP 1 Score: 249 bits (635), Expect = 1.310e-77 Identity = 122/178 (68.54%), Postives = 146/178 (82.02%), Query Frame = 1
Query: 1 TKLVMIESPTNPMQRIINIPDICRVAHSKNALVEVDSTMMTPCLQKPIVLGADLIVHSATKFISGHADVMAGVVVCKNQELSEQIYFFQNAEGTGLSPFDSWLLLRGIKTMHIRVEKQQENAIRVARFLKAHPCTTHVHYTGLESHPDYDIHMAQASGGGSVVCFRTGSLAFSQHIVT 534
T+L+M+ESPTNPMQRI++I I +AH+ NA+VE LGAD++VHSATKFISGH+D MAGVVV K++ L+EQ+YFFQNAEGTGLSPFDSWLLLRG+KTMHIRVE+QQENA+ VA FL AHP +HV+YTGL SHP + +HM+QASGGGSV+CFRTGSL FSQHIVT
Sbjct: 248 TRLIMLESPTNPMQRILDIRAISAIAHAHNAIVE---------------LGADIVVHSATKFISGHSDCMAGVVVVKDRALAEQVYFFQNAEGTGLSPFDSWLLLRGVKTMHIRVERQQENALAVAAFLSAHPRISHVYYTGLPSHPGHGLHMSQASGGGSVICFRTGSLPFSQHIVT 410
BLAST of mRNA_H-canaliculatus_M_contigs7551.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G7H2_PHYRM) HSP 1 Score: 234 bits (597), Expect = 2.650e-73 Identity = 114/183 (62.30%), Postives = 142/183 (77.60%), Query Frame = 1
Query: 1 TKLVMIESPTNPMQRIINIPDICRVAHSKNALVEVDSTMMTPCLQKPIVLGADLIVHSATKFISGHADVMAGVVVCKNQELSEQIYFFQNAEGTGLSPFDSWLLLRGIKTMHIRVEKQQENAIRVARFLKAHPCTTHVHYTGL--ESHPDYDIHMAQASGGGSVVCFRTGSLAFSQHIVTVRR 543
TKLVM+ESPTNPMQRI +I + AH+ AL+ VD+TMM+P LQ P+ LGAD++VHSATKF+ GH+D M+G+V+ K+ EL +YF+QNAEGTGL+PFD WLLLRG+KTM +RV Q+NAI+VA FL HP VHYT L E+ PD IH +QA G GSVVCFRTGSLAFSQH++TV +
Sbjct: 139 TKLVMMESPTNPMQRICDIKRLAEAAHTVGALLSVDNTMMSPILQNPLKLGADIVVHSATKFVCGHSDTMSGIVIAKDPELCRDVYFYQNAEGTGLAPFDCWLLLRGVKTMSLRVLAAQKNAIKVANFLNDHPLIQKVHYTSLLPENSPDRQIHDSQARGCGSVVCFRTGSLAFSQHLLTVTK 321
BLAST of mRNA_H-canaliculatus_M_contigs7551.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BF03_HYAAE) HSP 1 Score: 235 bits (600), Expect = 5.010e-72 Identity = 115/183 (62.84%), Postives = 142/183 (77.60%), Query Frame = 1
Query: 1 TKLVMIESPTNPMQRIINIPDICRVAHSKNALVEVDSTMMTPCLQKPIVLGADLIVHSATKFISGHADVMAGVVVCKNQELSEQIYFFQNAEGTGLSPFDSWLLLRGIKTMHIRVEKQQENAIRVARFLKAHPCTTHVHYTGL--ESHPDYDIHMAQASGGGSVVCFRTGSLAFSQHIVTVRR 543
TKLVM+ESPTNPMQRI +I + + AH+ AL+ VD+TMM+P LQ P+ LGAD++VHSATKF+ GH+D M+G+V+ K+ EL IYF+QNAEGTGL+PFD WLLLRG+KTM +RV QENA++VA FL HP VHYT L E PD IH +QA G GSVVCFRTGSLAFSQH++TV +
Sbjct: 286 TKLVMMESPTNPMQRICDIRRLAQAAHTVGALLSVDNTMMSPVLQNPLKLGADIVVHSATKFVCGHSDTMSGIVIAKDPELCRDIYFYQNAEGTGLAPFDCWLLLRGVKTMSLRVLAAQENAVKVANFLNDHPLIKTVHYTNLLDEHSPDRKIHDSQARGSGSVVCFRTGSLAFSQHLLTVTK 468
BLAST of mRNA_H-canaliculatus_M_contigs7551.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XBP1_GLOUD) HSP 1 Score: 233 bits (593), Expect = 4.290e-71 Identity = 117/183 (63.93%), Postives = 140/183 (76.50%), Query Frame = 1
Query: 1 TKLVMIESPTNPMQRIINIPDICRVAHSKNALVEVDSTMMTPCLQKPIVLGADLIVHSATKFISGHADVMAGVVVCKNQELSEQIYFFQNAEGTGLSPFDSWLLLRGIKTMHIRVEKQQENAIRVARFLKAHPCTTHVHYTGL--ESHPDYDIHMAQASGGGSVVCFRTGSLAFSQHIVTVRR 543
TKLVM+ESPTNPMQRI +I I AHS ALV VD+TMM+P LQ P+ LGAD++VHSATKFI GH+D M+GVV+ K+ EL IYF+QNAEGTGL+PFD WLLLRG+KTM +RV Q NA +VA FL+ HP TH +Y+ L + D IH +Q+ G GSVVCFRTGSLAFSQHIVTV +
Sbjct: 275 TKLVMMESPTNPMQRICDIKRIAEAAHSVGALVSVDNTMMSPILQNPLKLGADIVVHSATKFICGHSDTMSGVVIAKDPELCRDIYFYQNAEGTGLAPFDCWLLLRGVKTMSLRVLTAQTNAEQVANFLRDHPLVTHTYYSNLLPANSADRAIHESQSKGSGSVVCFRTGSLAFSQHIVTVTK 457
BLAST of mRNA_H-canaliculatus_M_contigs7551.1.1 vs.
Match: Cystathionine (beta-lyase n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A0W8BWX2_PHYNI) HSP 1 Score: 231 bits (590), Expect = 1.410e-70 Identity = 114/183 (62.30%), Postives = 141/183 (77.05%), Query Frame = 1
Query: 1 TKLVMIESPTNPMQRIINIPDICRVAHSKNALVEVDSTMMTPCLQKPIVLGADLIVHSATKFISGHADVMAGVVVCKNQELSEQIYFFQNAEGTGLSPFDSWLLLRGIKTMHIRVEKQQENAIRVARFLKAHPCTTHVHYTGL--ESHPDYDIHMAQASGGGSVVCFRTGSLAFSQHIVTVRR 543
TKLVM+ESPTNPMQRI +I + AH+ AL+ VD+TMM+P LQ P+ LGAD++VHSATKFI GH+D M+G+V+ K+ EL +YF+QNAEGTGL+PFD WLLLRG+KTM +RV Q+NA +VA FL HP VHYT L E+ PD IH +QA G GSVVCFRTGSLAFSQH++TV +
Sbjct: 282 TKLVMMESPTNPMQRICDIKCLAEAAHTVGALLSVDNTMMSPILQNPLKLGADIVVHSATKFICGHSDTMSGIVIAKDPELCRDVYFYQNAEGTGLAPFDCWLLLRGVKTMSLRVLAAQKNAAKVANFLNDHPLIKTVHYTNLLPENSPDRKIHDSQARGCGSVVCFRTGSLAFSQHLLTVTK 464
BLAST of mRNA_H-canaliculatus_M_contigs7551.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CCY9_SAPPC) HSP 1 Score: 229 bits (585), Expect = 3.060e-70 Identity = 111/181 (61.33%), Postives = 138/181 (76.24%), Query Frame = 1
Query: 1 TKLVMIESPTNPMQRIINIPDICRVAHSKNALVEVDSTMMTPCLQKPIVLGADLIVHSATKFISGHADVMAGVVVCKNQELSEQIYFFQNAEGTGLSPFDSWLLLRGIKTMHIRVEKQQENAIRVARFLKAHPCTTHVHYTGLESHPDYDIHMAQASGGGSVVCFRTGSLAFSQHIVTVRR 543
TKLVM+ESPTNPMQRI NIP + VAH AL+ VD+TMM+P LQ P++LGAD+ +HSATKF+ GH+D M+G+V+ K+ EL ++YF QNAEGTGL+P D WLLLRGIKTM +RV QENA+RVA FL HP T V+Y GL + DIH AQA G GSV+ F TG+LAFSQH+V+ +
Sbjct: 248 TKLVMMESPTNPMQRICNIPALAEVAHEFGALLSVDNTMMSPILQNPLLLGADICMHSATKFVCGHSDTMSGIVIAKDPELCRELYFVQNAEGTGLAPMDCWLLLRGIKTMGLRVLTAQENAMRVAAFLSNHPAVTKVYYAGLPTSNHRDIHFAQARGAGSVITFCTGNLAFSQHVVSTTK 428
BLAST of mRNA_H-canaliculatus_M_contigs7551.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FG54_PYTOL) HSP 1 Score: 230 bits (587), Expect = 3.760e-70 Identity = 113/183 (61.75%), Postives = 143/183 (78.14%), Query Frame = 1
Query: 1 TKLVMIESPTNPMQRIINIPDICRVAHSKNALVEVDSTMMTPCLQKPIVLGADLIVHSATKFISGHADVMAGVVVCKNQELSEQIYFFQNAEGTGLSPFDSWLLLRGIKTMHIRVEKQQENAIRVARFLKAHPCTTHVHYTGL--ESHPDYDIHMAQASGGGSVVCFRTGSLAFSQHIVTVRR 543
TKLVM+ESPTNPMQRI +I + VAHS AL+ VD+TMM+P LQ P+VLGAD++VHSATKFI GH+D M+G+V+ K+ EL +YF+QNAEGTGL+PFD WLLLRG+KTM +RV + Q+NA +VA FL+ HP THV+Y+ L + IH +QA G G+VVCFRTGSLA SQHIV+V +
Sbjct: 273 TKLVMMESPTNPMQRICDIKQLAEVAHSVGALLSVDNTMMSPILQNPLVLGADIVVHSATKFICGHSDTMSGIVIAKDPELCRDLYFYQNAEGTGLAPFDCWLLLRGVKTMSLRVLQAQQNAEQVATFLRDHPMVTHVYYSSLLPSNSAARRIHESQARGSGAVVCFRTGSLAISQHIVSVTK 455
BLAST of mRNA_H-canaliculatus_M_contigs7551.1.1 vs.
Match: Cystathionine (beta-lyase n=13 Tax=Phytophthora TaxID=4783 RepID=D0NLW7_PHYIT) HSP 1 Score: 230 bits (587), Expect = 3.850e-70 Identity = 113/183 (61.75%), Postives = 141/183 (77.05%), Query Frame = 1
Query: 1 TKLVMIESPTNPMQRIINIPDICRVAHSKNALVEVDSTMMTPCLQKPIVLGADLIVHSATKFISGHADVMAGVVVCKNQELSEQIYFFQNAEGTGLSPFDSWLLLRGIKTMHIRVEKQQENAIRVARFLKAHPCTTHVHYTGL--ESHPDYDIHMAQASGGGSVVCFRTGSLAFSQHIVTVRR 543
TKLVM+ESPTNPMQRI +I + AH+ AL+ VD+TMM+P LQ P+ LGAD++VHSATKFI GH+D M+G+V+ K+ EL +YF+QNAEGTGL+PFD WLLLRG+KTM +RV Q+NA++VA FL HP VHYT L E+ D IH +QA G GSVVCFRTGSLAFSQH++TV +
Sbjct: 281 TKLVMMESPTNPMQRICDIKRLAEAAHTVGALLSVDNTMMSPILQNPLKLGADIVVHSATKFICGHSDTMSGIVIAKDPELCRDVYFYQNAEGTGLAPFDCWLLLRGVKTMSLRVLAAQKNAVKVANFLNDHPLIKTVHYTNLLPENSADRKIHDSQARGCGSVVCFRTGSLAFSQHLLTVTK 463 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7551.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7551.1.1 >prot_H-canaliculatus_M_contigs7551.1.1 ID=prot_H-canaliculatus_M_contigs7551.1.1|Name=mRNA_H-canaliculatus_M_contigs7551.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=177bp MIESPTNPMQRIINIPDICRVAHSKNALVEVDSTMMTPCLQKPIVLGADLback to top mRNA from alignment at H-canaliculatus_M_contigs7551:1863..4492- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7551.1.1 ID=mRNA_H-canaliculatus_M_contigs7551.1.1|Name=mRNA_H-canaliculatus_M_contigs7551.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=2630bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7551:1863..4492- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7551:1863..4492- >mRNA_H-canaliculatus_M_contigs7551.1.1 ID=mRNA_H-canaliculatus_M_contigs7551.1.1|Name=mRNA_H-canaliculatus_M_contigs7551.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=531bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7551:1863..4492- (Hapterophycus canaliculatus Oshoro7m male)back to top |