mRNA_H-canaliculatus_M_contigs75456.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs75456.1.1
Unique NamemRNA_H-canaliculatus_M_contigs75456.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs75456.1.1 vs.
Match: H(+)-exporting (diphosphatase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNP5_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 3.040e-22
Identity = 45/49 (91.84%), Postives = 47/49 (95.92%), Query Frame = 1 
Query:    1 VSFGLALTGFAIISRWLLYVESSPSAWIHFFGCGIVGMVTAYIFILSTQ 147
            VSF LALTGFAIISRWLLYVE SPSAW+HFFGCGIVGMVTAY+FILSTQ
Sbjct:  304 VSFALALTGFAIISRWLLYVEDSPSAWLHFFGCGIVGMVTAYVFILSTQ 352
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BLAST of mRNA_H-canaliculatus_M_contigs75456.1.1 vs.
Match: H(+)-exporting (diphosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Z6_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 3.840e-22
Identity = 45/49 (91.84%), Postives = 47/49 (95.92%), Query Frame = 1 
Query:    1 VSFGLALTGFAIISRWLLYVESSPSAWIHFFGCGIVGMVTAYIFILSTQ 147
            VSF LALTGFAIISRWLLYVE SPSAW+HFFGCGIVGMVTAY+FILSTQ
Sbjct:  450 VSFALALTGFAIISRWLLYVEDSPSAWLHFFGCGIVGMVTAYVFILSTQ 498
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BLAST of mRNA_H-canaliculatus_M_contigs75456.1.1 vs.
Match: H(+)-exporting (diphosphatase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X000_GLOUD)

HSP 1 Score: 75.1 bits (183), Expect = 1.460e-14
Identity = 32/49 (65.31%), Postives = 41/49 (83.67%), Query Frame = 1 
Query:    1 VSFGLALTGFAIISRWLLYVESSPSAWIHFFGCGIVGMVTAYIFILSTQ 147
            VS GLAL GFA+ +RWLLY ++ P+AW HFF CG+VGM+TAY+F+ STQ
Sbjct:  412 VSLGLALGGFALTTRWLLYSDAHPNAWFHFFLCGVVGMLTAYVFVKSTQ 460
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BLAST of mRNA_H-canaliculatus_M_contigs75456.1.1 vs.
Match: H(+)-exporting (diphosphatase n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CMP9_SAPPC)

HSP 1 Score: 73.9 bits (180), Expect = 3.720e-14
Identity = 32/49 (65.31%), Postives = 41/49 (83.67%), Query Frame = 1 
Query:    1 VSFGLALTGFAIISRWLLYVESSPSAWIHFFGCGIVGMVTAYIFILSTQ 147
            V+ GLAL  FAI +RWLL+ E++PSAW HFF CG+VGMVTA++F+ STQ
Sbjct:  371 VTLGLALVAFAISTRWLLHTEAAPSAWFHFFLCGLVGMVTAFVFVKSTQ 419
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BLAST of mRNA_H-canaliculatus_M_contigs75456.1.1 vs.
Match: H(+)-exporting (diphosphatase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WVK4_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 1.300e-13
Identity = 31/49 (63.27%), Postives = 38/49 (77.55%), Query Frame = 1 
Query:    1 VSFGLALTGFAIISRWLLYVESSPSAWIHFFGCGIVGMVTAYIFILSTQ 147
            VS  LAL GFA  +RWLL+    PSAW+HFF CG+VGM+TAY+F+ STQ
Sbjct:  391 VSLALALAGFAFTTRWLLFTPEHPSAWMHFFCCGVVGMLTAYVFVKSTQ 439
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BLAST of mRNA_H-canaliculatus_M_contigs75456.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNE4_PYTOL)

HSP 1 Score: 72.0 bits (175), Expect = 1.770e-13
Identity = 30/48 (62.50%), Postives = 38/48 (79.17%), Query Frame = 1 
Query:    4 SFGLALTGFAIISRWLLYVESSPSAWIHFFGCGIVGMVTAYIFILSTQ 147
            S GLAL  FA+ +RWLLY E +P AW HFF CG+VGM+TA++F+ STQ
Sbjct:  383 SLGLALAAFALTTRWLLYSERAPGAWFHFFLCGVVGMITAFVFVKSTQ 430
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BLAST of mRNA_H-canaliculatus_M_contigs75456.1.1 vs.
Match: H(+)-exporting (diphosphatase n=24 Tax=Peronosporaceae TaxID=4777 RepID=H3G8L7_PHYRM)

HSP 1 Score: 70.5 bits (171), Expect = 6.180e-13
Identity = 30/49 (61.22%), Postives = 38/49 (77.55%), Query Frame = 1 
Query:    1 VSFGLALTGFAIISRWLLYVESSPSAWIHFFGCGIVGMVTAYIFILSTQ 147
            VS  LAL GF + +RWLLY    P+AWI+FF CG+VGM+TAY+F+ STQ
Sbjct:  353 VSLALALVGFGVTTRWLLYTPEHPTAWINFFLCGVVGMLTAYVFVKSTQ 401
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BLAST of mRNA_H-canaliculatus_M_contigs75456.1.1 vs.
Match: H(+)-exporting (diphosphatase n=17 Tax=Aphanomyces TaxID=100860 RepID=A0A485LV04_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 6.180e-13
Identity = 28/49 (57.14%), Postives = 39/49 (79.59%), Query Frame = 1 
Query:    1 VSFGLALTGFAIISRWLLYVESSPSAWIHFFGCGIVGMVTAYIFILSTQ 147
            ++  LAL  F + +RWLLY +++P+AW HFF CG+VGMVTAY+F+ STQ
Sbjct:  378 ITLALALAAFGLSTRWLLYTDAAPNAWFHFFLCGVVGMVTAYVFVKSTQ 426
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BLAST of mRNA_H-canaliculatus_M_contigs75456.1.1 vs.
Match: H(+)-exporting (diphosphatase n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YSW0_PHYSP)

HSP 1 Score: 69.3 bits (168), Expect = 1.580e-12
Identity = 30/49 (61.22%), Postives = 38/49 (77.55%), Query Frame = 1 
Query:    1 VSFGLALTGFAIISRWLLYVESSPSAWIHFFGCGIVGMVTAYIFILSTQ 147
            VS  LAL GFA  +RWLLY    P+AW++FF CG+VGM+TAY+F+ STQ
Sbjct:  347 VSLALALVGFAFTTRWLLYTPEYPTAWMNFFLCGVVGMLTAYVFVKSTQ 395
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BLAST of mRNA_H-canaliculatus_M_contigs75456.1.1 vs.
Match: H(+)-exporting (diphosphatase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BX10_HYAAE)

HSP 1 Score: 69.3 bits (168), Expect = 1.580e-12
Identity = 30/49 (61.22%), Postives = 37/49 (75.51%), Query Frame = 1 
Query:    1 VSFGLALTGFAIISRWLLYVESSPSAWIHFFGCGIVGMVTAYIFILSTQ 147
            VS  LAL GF   +RWLLY    P+AWI+FF CG+VGM+TAY+F+ STQ
Sbjct:  394 VSLALALVGFGFTTRWLLYTPECPTAWINFFLCGVVGMLTAYVFVKSTQ 442
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs75456.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
H(+)-exporting3.040e-2291.84diphosphatase n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
H(+)-exporting3.840e-2291.84diphosphatase n=1 Tax=Ectocarpus siliculosus TaxID... [more]
H(+)-exporting1.460e-1465.31diphosphatase n=1 Tax=Globisporangium ultimum (str... [more]
H(+)-exporting3.720e-1465.31diphosphatase n=4 Tax=Saprolegniaceae TaxID=4764 R... [more]
H(+)-exporting1.300e-1363.27diphosphatase n=2 Tax=Nothophytophthora sp. Chile5... [more]
Uncharacterized1.770e-1362.50protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
H(+)-exporting6.180e-1361.22diphosphatase n=24 Tax=Peronosporaceae TaxID=4777 ... [more]
H(+)-exporting6.180e-1357.14diphosphatase n=17 Tax=Aphanomyces TaxID=100860 Re... [more]
H(+)-exporting1.580e-1261.22diphosphatase n=1 Tax=Phytophthora sojae (strain P... [more]
H(+)-exporting1.580e-1261.22diphosphatase n=1 Tax=Hyaloperonospora arabidopsid... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs75456contigH-canaliculatus_M_contigs75456:25..171 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7G6Z6
PFAMsH_PPase
Model size147
Max annot lvl2759|Eukaryota
KEGG koko:K01507
KEGG Pathwayko00190,map00190
Hectar predicted targeting categorysignal peptide
Exons1
Evalue6.29e-23
EggNOG OGsCOG3808@1|root,2QPJC@2759|Eukaryota
EC3.6.1.1
Descriptionhydrogen-translocating pyrophosphatase activity
Cds size147
COG categoryC
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854091.615625-CDS-H-canaliculatus_M_contigs75456:24..1711696854091.615625-CDS-H-canaliculatus_M_contigs75456:24..171Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs75456 25..171 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs75456.1.1prot_H-canaliculatus_M_contigs75456.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs75456 25..171 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs75456.1.1

>prot_H-canaliculatus_M_contigs75456.1.1 ID=prot_H-canaliculatus_M_contigs75456.1.1|Name=mRNA_H-canaliculatus_M_contigs75456.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=49bp
VSFGLALTGFAIISRWLLYVESSPSAWIHFFGCGIVGMVTAYIFILSTQ
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mRNA from alignment at H-canaliculatus_M_contigs75456:25..171+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs75456.1.1 ID=mRNA_H-canaliculatus_M_contigs75456.1.1|Name=mRNA_H-canaliculatus_M_contigs75456.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=147bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75456:25..171+ (Hapterophycus canaliculatus Oshoro7m male)
GTGAGCTTCGGACTGGCCCTGACAGGTTTTGCGATTATATCGCGCTGGCT
GCTCTATGTAGAGTCTTCTCCGTCGGCATGGATTCACTTCTTCGGGTGCG
GCATCGTGGGCATGGTCACCGCCTACATATTCATTCTCTCCACCCAG
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs75456:25..171+

>mRNA_H-canaliculatus_M_contigs75456.1.1 ID=mRNA_H-canaliculatus_M_contigs75456.1.1|Name=mRNA_H-canaliculatus_M_contigs75456.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=147bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75456:25..171+ (Hapterophycus canaliculatus Oshoro7m male)
GTGAGCTTCGGACTGGCCCTGACAGGTTTTGCGATTATATCGCGCTGGCT
GCTCTATGTAGAGTCTTCTCCGTCGGCATGGATTCACTTCTTCGGGTGCG
GCATCGTGGGCATGGTCACCGCCTACATATTCATTCTCTCCACCCAG
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