mRNA_H-canaliculatus_M_contigs75445.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs75445.1.1 vs.
Match: Transposase (n=4 Tax=Rhodobacterales TaxID=204455 RepID=A0A196NKS5_9RHOB) HSP 1 Score: 310 bits (795), Expect = 3.550e-104 Identity = 158/179 (88.27%), Postives = 167/179 (93.30%), Query Frame = 1
Query: 1 IFASRKMDFVDLLAAIFLIVNASKGISMVQLSRDLDCQYKTAFVLAHKLREAMALEVHTGEVLEGHVEIDGAFFGGHIRPENAKKDRKDRRLKENQTGKRRVVIAMREREGRTLPFVRKSEGEGVALANENVSRTATMSADEAGHWDLLHMGYDVDRVNHSEIYSDDGKHTNMVESFFS 537
IFASRKMDFVDLLAAI +IVNASKG+SMVQLSRDLDCQYKTAFVLAHKLREAMA+EVHTGEVLEGHVEIDGA+FGGHIRPENAK DRKDRRLKE+QTGKRRVVI MRER GRTLP V +EGEGVALA ENVSRTATMSADEA HWD+LH G++VDRVNHSEIYSD GKHTNM ESFFS
Sbjct: 78 IFASRKMDFVDLLAAICIIVNASKGVSMVQLSRDLDCQYKTAFVLAHKLREAMAMEVHTGEVLEGHVEIDGAYFGGHIRPENAKADRKDRRLKEHQTGKRRVVIVMRERAGRTLPTVAMNEGEGVALAQENVSRTATMSADEASHWDMLHAGWNVDRVNHSEIYSDHGKHTNMAESFFS 256
BLAST of mRNA_H-canaliculatus_M_contigs75445.1.1 vs.
Match: Transposase (zinc-ribbon domain/ISXO2-like transposase domain n=5 Tax=Rhodobacterales TaxID=204455 RepID=A0A0J5QEM0_9RHOB) HSP 1 Score: 306 bits (783), Expect = 1.220e-102 Identity = 158/179 (88.27%), Postives = 166/179 (92.74%), Query Frame = 1
Query: 1 IFASRKMDFVDLLAAIFLIVNASKGISMVQLSRDLDCQYKTAFVLAHKLREAMALEVHTGEVLEGHVEIDGAFFGGHIRPENAKKDRKDRRLKENQTGKRRVVIAMREREGRTLPFVRKSEGEGVALANENVSRTATMSADEAGHWDLLHMGYDVDRVNHSEIYSDDGKHTNMVESFFS 537
IFASRKMDFVDL AAI +IVNASKG+SMVQLSRDLDCQYKTAFVLAHKLREAMA EVHTGEVLEGHVEIDGA+FGGHIRPENAK DR DRR KE+QTGKRRVVIA+REREGRTLPFV SEGEGVALANENVSR +TMSADEA HWD LH+G+ VDRVNHSEIYSD GKHTNMVESFFS
Sbjct: 78 IFASRKMDFVDLWAAICIIVNASKGVSMVQLSRDLDCQYKTAFVLAHKLREAMAREVHTGEVLEGHVEIDGAYFGGHIRPENAKVDRVDRRKKEHQTGKRRVVIALREREGRTLPFVGMSEGEGVALANENVSRLSTMSADEANHWDELHLGHYVDRVNHSEIYSDHGKHTNMVESFFS 256
BLAST of mRNA_H-canaliculatus_M_contigs75445.1.1 vs.
Match: Putative (transposase n=1 Tax=Roseobacter sp. CCS2 TaxID=391593 RepID=A4EIH2_9RHOB) HSP 1 Score: 306 bits (784), Expect = 1.660e-102 Identity = 158/179 (88.27%), Postives = 165/179 (92.18%), Query Frame = 1
Query: 1 IFASRKMDFVDLLAAIFLIVNASKGISMVQLSRDLDCQYKTAFVLAHKLREAMALEVHTGEVLEGHVEIDGAFFGGHIRPENAKKDRKDRRLKENQTGKRRVVIAMREREGRTLPFVRKSEGEGVALANENVSRTATMSADEAGHWDLLHMGYDVDRVNHSEIYSDDGKHTNMVESFFS 537
IFASRKMDFVDLLAAIFLIVNASKG+SMVQLSRDLDCQYKTAFVLAHKLREAMA EVHTGEVL+GHVEIDGA+FGGHIRP NAK DR DRRLK NQTGKRRVV+AMRER+GRTLPFV EGEGVALA ENVSRTATMSADEA HWD LH G+ V+RVNHSEIYSD GKHTNMVESFFS
Sbjct: 78 IFASRKMDFVDLLAAIFLIVNASKGMSMVQLSRDLDCQYKTAFVLAHKLREAMATEVHTGEVLDGHVEIDGAYFGGHIRPANAKADRVDRRLKRNQTGKRRVVVAMRERQGRTLPFVAMGEGEGVALAVENVSRTATMSADEASHWDTLHDGWMVNRVNHSEIYSDHGKHTNMVESFFS 256
BLAST of mRNA_H-canaliculatus_M_contigs75445.1.1 vs.
Match: Transposase (n=2 Tax=Rhodobacterales TaxID=204455 RepID=A0A1X7PY79_9RHOB) HSP 1 Score: 305 bits (782), Expect = 3.460e-102 Identity = 153/179 (85.47%), Postives = 167/179 (93.30%), Query Frame = 1
Query: 1 IFASRKMDFVDLLAAIFLIVNASKGISMVQLSRDLDCQYKTAFVLAHKLREAMALEVHTGEVLEGHVEIDGAFFGGHIRPENAKKDRKDRRLKENQTGKRRVVIAMREREGRTLPFVRKSEGEGVALANENVSRTATMSADEAGHWDLLHMGYDVDRVNHSEIYSDDGKHTNMVESFFS 537
IFASRKMDFVDLLAAI + VNASKG+SMVQLSRDLDCQYKTAFVLAHKLREAMA EVHTGEVL+GHVEIDGA+FGGHIRPEN K+DRKDRRLK +QTGKRRVV+A+RER GRTLPFV SEGEGVALANEN+SR AT+SADEA HWD+LH G++VDRVNHSE+YSD GKHTNMVESFFS
Sbjct: 78 IFASRKMDFVDLLAAICITVNASKGVSMVQLSRDLDCQYKTAFVLAHKLREAMAQEVHTGEVLDGHVEIDGAYFGGHIRPENRKEDRKDRRLKAHQTGKRRVVVALRERVGRTLPFVAMSEGEGVALANENISRMATISADEASHWDMLHAGWNVDRVNHSEVYSDHGKHTNMVESFFS 256
BLAST of mRNA_H-canaliculatus_M_contigs75445.1.1 vs.
Match: Putative (transposase n=1 Tax=Dinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12) TaxID=398580 RepID=A8LJX1_DINSH) HSP 1 Score: 304 bits (779), Expect = 9.570e-102 Identity = 152/179 (84.92%), Postives = 166/179 (92.74%), Query Frame = 1
Query: 1 IFASRKMDFVDLLAAIFLIVNASKGISMVQLSRDLDCQYKTAFVLAHKLREAMALEVHTGEVLEGHVEIDGAFFGGHIRPENAKKDRKDRRLKENQTGKRRVVIAMREREGRTLPFVRKSEGEGVALANENVSRTATMSADEAGHWDLLHMGYDVDRVNHSEIYSDDGKHTNMVESFFS 537
IFASRKMDFVDLLAAI ++VNASKG+SM+QLSRDLDCQYKTAFVLAHKLREAMA EV TGEVLEGHVEIDGA+FGGHIRPEN K+DRKDRRLKENQTGKRRVV+A+REREGRTLPFV K E EGVALANENV R AT+SADEA HWD+LH G+DV RVNHS++YSD GKHTN+VESFFS
Sbjct: 78 IFASRKMDFVDLLAAICILVNASKGVSMIQLSRDLDCQYKTAFVLAHKLREAMAQEVQTGEVLEGHVEIDGAYFGGHIRPENRKEDRKDRRLKENQTGKRRVVVALREREGRTLPFVTKLESEGVALANENVCRMATVSADEASHWDMLHNGWDVQRVNHSQVYSDHGKHTNLVESFFS 256
BLAST of mRNA_H-canaliculatus_M_contigs75445.1.1 vs.
Match: Possible (transposase n=5 Tax=Rhodobacterales TaxID=204455 RepID=A3W4M7_9RHOB) HSP 1 Score: 298 bits (763), Expect = 2.580e-99 Identity = 153/179 (85.47%), Postives = 162/179 (90.50%), Query Frame = 1
Query: 1 IFASRKMDFVDLLAAIFLIVNASKGISMVQLSRDLDCQYKTAFVLAHKLREAMALEVHTGEVLEGHVEIDGAFFGGHIRPENAKKDRKDRRLKENQTGKRRVVIAMREREGRTLPFVRKSEGEGVALANENVSRTATMSADEAGHWDLLHMGYDVDRVNHSEIYSDDGKHTNMVESFFS 537
IFASRKMDFVDLLAAI +IVN +KG+SM+QLSRDLDCQYKTAFVLAHKLREAMA EV TGEVL+GHVEIDGA+FGGHIRPENAK DRKDRRLK +QTGKRRVVIAMRER GRTLP V SE EGVALANENV R ATMSADEA HWD LHMG+ VDRVNHSEIYSD GKHTNMVES+FS
Sbjct: 78 IFASRKMDFVDLLAAICIIVNGAKGVSMIQLSRDLDCQYKTAFVLAHKLREAMAQEVQTGEVLQGHVEIDGAYFGGHIRPENAKADRKDRRLKAHQTGKRRVVIAMRERTGRTLPVVGMSEAEGVALANENVCRMATMSADEASHWDELHMGWSVDRVNHSEIYSDHGKHTNMVESYFS 256
BLAST of mRNA_H-canaliculatus_M_contigs75445.1.1 vs.
Match: IS1595 (family transposase n=1 Tax=Lentibacter algarum TaxID=576131 RepID=UPI001C094F1F) HSP 1 Score: 298 bits (763), Expect = 2.580e-99 Identity = 154/179 (86.03%), Postives = 164/179 (91.62%), Query Frame = 1
Query: 1 IFASRKMDFVDLLAAIFLIVNASKGISMVQLSRDLDCQYKTAFVLAHKLREAMALEVHTGEVLEGHVEIDGAFFGGHIRPENAKKDRKDRRLKENQTGKRRVVIAMREREGRTLPFVRKSEGEGVALANENVSRTATMSADEAGHWDLLHMGYDVDRVNHSEIYSDDGKHTNMVESFFS 537
IFASRKMDFVDLLAAIFLIVNASKG+SMVQLSR +DCQYKTAFVLAHKLREAMALEV TGEVLEGHVEIDGA+FGGHIRP N K R DRRLK++QTG RRVV+A+REREGRTLPF+ +EGEGVALA ENVSRTATMSADEA HWDLLH G+ VDRVNHSEIYSD GKHTNMVESFFS
Sbjct: 78 IFASRKMDFVDLLAAIFLIVNASKGMSMVQLSRSIDCQYKTAFVLAHKLREAMALEVQTGEVLEGHVEIDGAYFGGHIRPANEKAKRIDRRLKKHQTGTRRVVVALREREGRTLPFIAMNEGEGVALAVENVSRTATMSADEASHWDLLHDGWMVDRVNHSEIYSDHGKHTNMVESFFS 256
BLAST of mRNA_H-canaliculatus_M_contigs75445.1.1 vs.
Match: Putative (IS1595 family transposase n=2 Tax=Octadecabacter arcticus TaxID=53946 RepID=M9RMZ2_9RHOB) HSP 1 Score: 297 bits (761), Expect = 6.100e-99 Identity = 151/179 (84.36%), Postives = 162/179 (90.50%), Query Frame = 1
Query: 1 IFASRKMDFVDLLAAIFLIVNASKGISMVQLSRDLDCQYKTAFVLAHKLREAMALEVHTGEVLEGHVEIDGAFFGGHIRPENAKKDRKDRRLKENQTGKRRVVIAMREREGRTLPFVRKSEGEGVALANENVSRTATMSADEAGHWDLLHMGYDVDRVNHSEIYSDDGKHTNMVESFFS 537
IFASRKMDFVDLLAAIF++VNASKG+SMVQLSRDLDCQYKTAFVL+HKLREAMA EV TGEVL+GH+EIDGA+F GHIRP NAK DR D RLK +QTGKRRVV+A+RER GRTLPFV SE EGVALANENV RTATMSADEA HWD LHMG+ VDRVNHSEIYSD GKHTNMVESFFS
Sbjct: 83 IFASRKMDFVDLLAAIFILVNASKGVSMVQLSRDLDCQYKTAFVLSHKLREAMAQEVQTGEVLQGHIEIDGAYFSGHIRPANAKVDRVDLRLKRHQTGKRRVVVALRERTGRTLPFVSMSEAEGVALANENVCRTATMSADEASHWDALHMGHHVDRVNHSEIYSDHGKHTNMVESFFS 261
BLAST of mRNA_H-canaliculatus_M_contigs75445.1.1 vs.
Match: IS1595 (family transposase n=3 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A365TRI5_9RHOB) HSP 1 Score: 296 bits (759), Expect = 1.040e-98 Identity = 149/179 (83.24%), Postives = 161/179 (89.94%), Query Frame = 1
Query: 1 IFASRKMDFVDLLAAIFLIVNASKGISMVQLSRDLDCQYKTAFVLAHKLREAMALEVHTGEVLEGHVEIDGAFFGGHIRPENAKKDRKDRRLKENQTGKRRVVIAMREREGRTLPFVRKSEGEGVALANENVSRTATMSADEAGHWDLLHMGYDVDRVNHSEIYSDDGKHTNMVESFFS 537
IFASRKMDFVDLLAAI ++VN +KG+SM+QLSRDLDCQYKTAFVLAHKLREAMA EV TGEVLEGH+EIDGA+FGGHIRPEN K+DRKDRR K+NQTGKRRVVIAMRER GRTLPFV EGEGVALANEN+ R ATMSADEA HWD LHMG+ VDRVNHSE YSD GKHTNM ES+FS
Sbjct: 78 IFASRKMDFVDLLAAICILVNGAKGVSMIQLSRDLDCQYKTAFVLAHKLREAMASEVQTGEVLEGHIEIDGAYFGGHIRPENRKEDRKDRRRKDNQTGKRRVVIAMRERVGRTLPFVSTDEGEGVALANENICRLATMSADEASHWDELHMGWAVDRVNHSECYSDHGKHTNMAESYFS 256
BLAST of mRNA_H-canaliculatus_M_contigs75445.1.1 vs.
Match: DDE_Tnp_IS1595 (domain-containing protein n=2 Tax=Rhodobacterales TaxID=204455 RepID=A0A2R8B9L6_9RHOB) HSP 1 Score: 295 bits (755), Expect = 4.220e-98 Identity = 152/179 (84.92%), Postives = 161/179 (89.94%), Query Frame = 1
Query: 1 IFASRKMDFVDLLAAIFLIVNASKGISMVQLSRDLDCQYKTAFVLAHKLREAMALEVHTGEVLEGHVEIDGAFFGGHIRPENAKKDRKDRRLKENQTGKRRVVIAMREREGRTLPFVRKSEGEGVALANENVSRTATMSADEAGHWDLLHMGYDVDRVNHSEIYSDDGKHTNMVESFFS 537
IFASRKM FVDLLAAI LIVNASKG+SMVQLSRD+DCQYKTAFVLAHKLREA+A EV TGEVLEGHVEIDGA+FGGHIRP N K R DRRLK++QTG RRVV+A+RER GRTLPFV +EGEGVALA ENVSR ATMSADEA HWD LHMGYDVDRVNHSEIYSD GKHTNMVESFFS
Sbjct: 78 IFASRKMGFVDLLAAICLIVNASKGMSMVQLSRDIDCQYKTAFVLAHKLREAIAREVQTGEVLEGHVEIDGAYFGGHIRPHNEKAKRVDRRLKKHQTGMRRVVVALRERTGRTLPFVAMTEGEGVALAQENVSRMATMSADEASHWDALHMGYDVDRVNHSEIYSDHGKHTNMVESFFS 256 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs75445.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs75445.1.1 >prot_H-canaliculatus_M_contigs75445.1.1 ID=prot_H-canaliculatus_M_contigs75445.1.1|Name=mRNA_H-canaliculatus_M_contigs75445.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=173bp MDFVDLLAAIFLIVNASKGISMVQLSRDLDCQYKTAFVLAHKLREAMALEback to top mRNA from alignment at H-canaliculatus_M_contigs75445:3..539+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs75445.1.1 ID=mRNA_H-canaliculatus_M_contigs75445.1.1|Name=mRNA_H-canaliculatus_M_contigs75445.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=537bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75445:3..539+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs75445:3..539+ >mRNA_H-canaliculatus_M_contigs75445.1.1 ID=mRNA_H-canaliculatus_M_contigs75445.1.1|Name=mRNA_H-canaliculatus_M_contigs75445.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=519bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75445:3..539+ (Hapterophycus canaliculatus Oshoro7m male)back to top |