mRNA_H-canaliculatus_M_contigs754.3.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
|
Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs754.3.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ95_9PHAE) HSP 1 Score: 346 bits (887), Expect = 2.340e-116 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 1
Query: 1 AILGVDIVCQAKSGMGKTAVFVLATLHQLNPQPGEVSCLVLCHTRELAWQIAREYERFCKHLPEVKVAVLYGGLPVQKQREMLKNDTPHIVVGCPGRVMQLVREGDLKVDKLQYFVLDECDKMLDQKDMRAQVQEIFFKTPHTKQVMMFSATLSPEVRPICRKFCHEK 504
AILGVDIVCQAKSGMGKTAVFVLATLHQLNPQPGEVSCLVLCHTRELAWQIAREYERFCKHLPEVKVAVLYGGLPVQKQREMLKNDTPHIVVGCPGRVMQLVREGDLKVDKLQYFVLDECDKMLDQKDMRAQVQEIFFKTPHTKQVMMFSATLSPEVRPICRKFCHEK
Sbjct: 94 AILGVDIVCQAKSGMGKTAVFVLATLHQLNPQPGEVSCLVLCHTRELAWQIAREYERFCKHLPEVKVAVLYGGLPVQKQREMLKNDTPHIVVGCPGRVMQLVREGDLKVDKLQYFVLDECDKMLDQKDMRAQVQEIFFKTPHTKQVMMFSATLSPEVRPICRKFCHEK 261
BLAST of mRNA_H-canaliculatus_M_contigs754.3.1 vs.
Match: DEAD (box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK23_ECTSI) HSP 1 Score: 346 bits (887), Expect = 1.560e-111 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 1
Query: 1 AILGVDIVCQAKSGMGKTAVFVLATLHQLNPQPGEVSCLVLCHTRELAWQIAREYERFCKHLPEVKVAVLYGGLPVQKQREMLKNDTPHIVVGCPGRVMQLVREGDLKVDKLQYFVLDECDKMLDQKDMRAQVQEIFFKTPHTKQVMMFSATLSPEVRPICRKFCHEK 504
AILGVDIVCQAKSGMGKTAVFVLATLHQLNPQPGEVSCLVLCHTRELAWQIAREYERFCKHLPEVKVAVLYGGLPVQKQREMLKNDTPHIVVGCPGRVMQLVREGDLKVDKLQYFVLDECDKMLDQKDMRAQVQEIFFKTPHTKQVMMFSATLSPEVRPICRKFCHEK
Sbjct: 93 AILGVDIVCQAKSGMGKTAVFVLATLHQLNPQPGEVSCLVLCHTRELAWQIAREYERFCKHLPEVKVAVLYGGLPVQKQREMLKNDTPHIVVGCPGRVMQLVREGDLKVDKLQYFVLDECDKMLDQKDMRAQVQEIFFKTPHTKQVMMFSATLSPEVRPICRKFCHEK 260
BLAST of mRNA_H-canaliculatus_M_contigs754.3.1 vs.
Match: Dead (box family RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDU8_9STRA) HSP 1 Score: 251 bits (640), Expect = 2.720e-79 Identity = 117/167 (70.06%), Postives = 142/167 (85.03%), Query Frame = 1
Query: 1 AILGVDIVCQAKSGMGKTAVFVLATLHQLNPQPGEVSCLVLCHTRELAWQIAREYERFCKHLPEVKVAVLYGGLPVQKQREMLKNDTPHIVVGCPGRVMQLVREGDLKVDKLQYFVLDECDKMLDQKDMRAQVQEIFFKTPHTKQVMMFSATLSPEVRPICRKFCHE 501
A+LG+D++CQAKSGMGKTAVFVLATL+Q+NP PGEVS LVLCHTRELAWQIA EY+RF K+LP VKV V YGG+P+ R LK++ P+IVVG PGR++QLV E +LK+DKL++FVLDECD+ML+ DMR VQ+IF TPHTKQVMMFSATL E+RP+CRKFC +
Sbjct: 80 AVLGMDVICQAKSGMGKTAVFVLATLNQVNPVPGEVSALVLCHTRELAWQIAHEYDRFSKYLPNVKVGVFYGGVPIGTNRAALKDNCPNIVVGTPGRILQLVTEKNLKLDKLKHFVLDECDRMLEALDMRRDVQQIFMATPHTKQVMMFSATLPKEIRPVCRKFCQD 246
BLAST of mRNA_H-canaliculatus_M_contigs754.3.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WKG8_9STRA) HSP 1 Score: 241 bits (614), Expect = 8.410e-77 Identity = 118/172 (68.60%), Postives = 140/172 (81.40%), Query Frame = 1
Query: 1 AILGVDIVCQAKSGMGKTAVFVLATLHQLNPQP-----GEVSCLVLCHTRELAWQIAREYERFCKHLPEVKVAVLYGGLPVQKQREMLKNDTPHIVVGCPGRVMQLVREGDLKVDKLQYFVLDECDKMLDQKDMRAQVQEIFFKTPHTKQVMMFSATLSPEVRPICRKFCHE 501
A+LG+DIVCQAKSGMGKTAVFVLATLHQLNP +VS LVLCHTRELA+QIA EYERF K+LPEVK AV YGG+ ++ R++LKND PHIVVG PGRV+ L RE LK+D +++FVLDECD++L+ DMR VQEIF TPH KQVMMFSATLS E+RP+C+KFC +
Sbjct: 63 AVLGMDIVCQAKSGMGKTAVFVLATLHQLNPSAFPAGENQVSVLVLCHTRELAFQIAHEYERFSKYLPEVKTAVFYGGVAIKTNRDVLKNDCPHIVVGTPGRVLGLAREKTLKLDHIKHFVLDECDRILESLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCKKFCQD 234
BLAST of mRNA_H-canaliculatus_M_contigs754.3.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYK1_9STRA) HSP 1 Score: 243 bits (620), Expect = 2.710e-76 Identity = 113/167 (67.66%), Postives = 142/167 (85.03%), Query Frame = 1
Query: 1 AILGVDIVCQAKSGMGKTAVFVLATLHQLNPQPGEVSCLVLCHTRELAWQIAREYERFCKHLPEVKVAVLYGGLPVQKQREMLKNDTPHIVVGCPGRVMQLVREGDLKVDKLQYFVLDECDKMLDQKDMRAQVQEIFFKTPHTKQVMMFSATLSPEVRPICRKFCHE 501
A+LG+DI+CQAKSGMGKTAVFVLATLHQL P GEVS LV+CHTRELA+QI+REY RF K+LP+VK AV YGG+ +++ R+ L NDTPHIVVG PGR++QL +E LK+DK+++FV+DECD++LDQ DMR VQ IF TPH KQV+MF+ATLS E+RP+C+KFC +
Sbjct: 79 AVLGMDIICQAKSGMGKTAVFVLATLHQLQPTDGEVSVLVICHTRELAFQISREYARFSKYLPDVKTAVFYGGVNIKQNRDTLTNDTPHIVVGTPGRLLQLAKEKALKLDKIKHFVIDECDRVLDQLDMRRDVQHIFRMTPHEKQVVMFTATLSKEMRPVCKKFCQD 245
BLAST of mRNA_H-canaliculatus_M_contigs754.3.1 vs.
Match: Uncharacterized (protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GTY9_9STRA) HSP 1 Score: 241 bits (615), Expect = 8.340e-76 Identity = 112/167 (67.07%), Postives = 140/167 (83.83%), Query Frame = 1
Query: 1 AILGVDIVCQAKSGMGKTAVFVLATLHQLNPQPGEVSCLVLCHTRELAWQIAREYERFCKHLPEVKVAVLYGGLPVQKQREMLKNDTPHIVVGCPGRVMQLVREGDLKVDKLQYFVLDECDKMLDQKDMRAQVQEIFFKTPHTKQVMMFSATLSPEVRPICRKFCHE 501
A+LG+DI+CQAKSGMGKTAVFVLATLHQ+ P G++S +VLCHTRELA+QIA EYERF K+L VK AV YGG+ + K RE LK++TPHIVVG PGR++ L++E +K+DK+++FV+DECDK+L+ DMR VQEIF TPH KQVMMFSATLS E+RP+CRKFC +
Sbjct: 57 AVLGMDIICQAKSGMGKTAVFVLATLHQIEPVDGQISVMVLCHTRELAFQIAHEYERFSKYLYNVKTAVFYGGIAITKDRETLKSNTPHIVVGTPGRILGLLKEKSIKLDKVKHFVMDECDKLLEALDMRRDVQEIFRSTPHDKQVMMFSATLSKEIRPVCRKFCQD 223
BLAST of mRNA_H-canaliculatus_M_contigs754.3.1 vs.
Match: Hypothetical (protein n=4 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S4JCU7_9STRA) HSP 1 Score: 242 bits (617), Expect = 9.020e-76 Identity = 118/172 (68.60%), Postives = 141/172 (81.98%), Query Frame = 1
Query: 1 AILGVDIVCQAKSGMGKTAVFVLATLHQLNPQP-----GEVSCLVLCHTRELAWQIAREYERFCKHLPEVKVAVLYGGLPVQKQREMLKNDTPHIVVGCPGRVMQLVREGDLKVDKLQYFVLDECDKMLDQKDMRAQVQEIFFKTPHTKQVMMFSATLSPEVRPICRKFCHE 501
A+LG+DIVCQAKSGMGKTAVFVLATLHQLNP+ +VS LVLCHTRELA+QIA EYERF K+LPE+K AV YGG+ ++ R++LKND PHIVVG PGRV+ L RE LK+D +++F+LDECDKML+ DMR VQEIF TPH KQVMMFSATLS E+RP+C+KFC +
Sbjct: 80 AVLGMDIVCQAKSGMGKTAVFVLATLHQLNPKAFAEGENQVSVLVLCHTRELAFQIAHEYERFSKYLPEIKTAVFYGGVNIKTNRDILKNDCPHIVVGTPGRVLGLAREKTLKLDHIKHFILDECDKMLEGLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCKKFCQD 251
BLAST of mRNA_H-canaliculatus_M_contigs754.3.1 vs.
Match: Predicted (protein putative n=2 Tax=Oomycota TaxID=4762 RepID=F0WAE6_9STRA) HSP 1 Score: 241 bits (616), Expect = 1.080e-75 Identity = 112/167 (67.07%), Postives = 140/167 (83.83%), Query Frame = 1
Query: 1 AILGVDIVCQAKSGMGKTAVFVLATLHQLNPQPGEVSCLVLCHTRELAWQIAREYERFCKHLPEVKVAVLYGGLPVQKQREMLKNDTPHIVVGCPGRVMQLVREGDLKVDKLQYFVLDECDKMLDQKDMRAQVQEIFFKTPHTKQVMMFSATLSPEVRPICRKFCHE 501
A+LG+DI+CQAKSGMGKTAVFVLATLHQ+ P G++S +VLCHTRELA+QIA EYERF K+L VK AV YGG+ + K R+ LK++TPHIVVG PGR++ L+RE +K+DK+++FV+DECDK+L+ DMR VQEIF TPH KQVMMFSATLS E+RP+CRKFC +
Sbjct: 79 AVLGMDIICQAKSGMGKTAVFVLATLHQIEPVDGQISVMVLCHTRELAFQIAHEYERFSKYLHNVKTAVFYGGIAITKDRDTLKSNTPHIVVGTPGRILGLLREKSIKLDKVKHFVMDECDKLLEALDMRRDVQEIFRSTPHDKQVMMFSATLSKEIRPVCRKFCQD 245
BLAST of mRNA_H-canaliculatus_M_contigs754.3.1 vs.
Match: Hypothetical (protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JCS3_9STRA) HSP 1 Score: 242 bits (617), Expect = 1.540e-75 Identity = 118/172 (68.60%), Postives = 141/172 (81.98%), Query Frame = 1
Query: 1 AILGVDIVCQAKSGMGKTAVFVLATLHQLNPQP-----GEVSCLVLCHTRELAWQIAREYERFCKHLPEVKVAVLYGGLPVQKQREMLKNDTPHIVVGCPGRVMQLVREGDLKVDKLQYFVLDECDKMLDQKDMRAQVQEIFFKTPHTKQVMMFSATLSPEVRPICRKFCHE 501
A+LG+DIVCQAKSGMGKTAVFVLATLHQLNP+ +VS LVLCHTRELA+QIA EYERF K+LPE+K AV YGG+ ++ R++LKND PHIVVG PGRV+ L RE LK+D +++F+LDECDKML+ DMR VQEIF TPH KQVMMFSATLS E+RP+C+KFC +
Sbjct: 100 AVLGMDIVCQAKSGMGKTAVFVLATLHQLNPKAFAEGENQVSVLVLCHTRELAFQIAHEYERFSKYLPEIKTAVFYGGVNIKTNRDILKNDCPHIVVGTPGRVLGLAREKTLKLDHIKHFILDECDKMLEGLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCKKFCQD 271
BLAST of mRNA_H-canaliculatus_M_contigs754.3.1 vs.
Match: Hypothetical (protein n=3 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BVY3_9STRA) HSP 1 Score: 241 bits (615), Expect = 1.760e-75 Identity = 112/167 (67.07%), Postives = 139/167 (83.23%), Query Frame = 1
Query: 1 AILGVDIVCQAKSGMGKTAVFVLATLHQLNPQPGEVSCLVLCHTRELAWQIAREYERFCKHLPEVKVAVLYGGLPVQKQREMLKNDTPHIVVGCPGRVMQLVREGDLKVDKLQYFVLDECDKMLDQKDMRAQVQEIFFKTPHTKQVMMFSATLSPEVRPICRKFCHE 501
A+LG+DI+CQAKSGMGKTAVFVLATLHQL P EVS LVLCHTRELA+QIA EYERF K+LP+VK AV YGG+ ++ RE L+ND PHIVVG PGR++ L +E LK+DK+++FVLDECD++L+ DMR +Q+IF TPH KQVMMFSATL+ E+RP+C+KFC +
Sbjct: 84 AVLGMDIICQAKSGMGKTAVFVLATLHQLTPVDNEVSVLVLCHTRELAFQIAHEYERFSKYLPDVKTAVFYGGVNIKSNRETLQNDCPHIVVGTPGRILGLAKEKTLKLDKIKHFVLDECDRVLESLDMRRDIQQIFMLTPHEKQVMMFSATLAKEIRPVCKKFCQD 250 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs754.3.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs754.3.1 >prot_H-canaliculatus_M_contigs754.3.1 ID=prot_H-canaliculatus_M_contigs754.3.1|Name=mRNA_H-canaliculatus_M_contigs754.3.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=179bp AILGVDIVCQAKSGMGKTAVFVLATLHQLNPQPGEVSCLVLCHTRELAWQback to top mRNA from alignment at H-canaliculatus_M_contigs754:5969..7613- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs754.3.1 ID=mRNA_H-canaliculatus_M_contigs754.3.1|Name=mRNA_H-canaliculatus_M_contigs754.3.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=1645bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs754:5969..7613- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs754:5969..7613- >mRNA_H-canaliculatus_M_contigs754.3.1 ID=mRNA_H-canaliculatus_M_contigs754.3.1|Name=mRNA_H-canaliculatus_M_contigs754.3.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=537bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs754:5969..7613- (Hapterophycus canaliculatus Oshoro7m male)back to top |