mRNA_H-canaliculatus_M_contigs75372.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs75372.1.1
Unique NamemRNA_H-canaliculatus_M_contigs75372.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs75372.1.1 vs.
Match: Endonuclease (n=2 Tax=Polaribacter reichenbachii TaxID=996801 RepID=A0A1B8TPW1_9FLAO)

HSP 1 Score: 227 bits (578), Expect = 4.530e-71
Identity = 112/181 (61.88%), Postives = 141/181 (77.90%), Query Frame = 1
Query:    1 VNLKKQFILSTLILTIGWFFTPTLYKVTANNSSFNDDLKVMSYNVRMFNYWNWIDDDEILQKTKKLVAKQSPDILLIQECYDFS--NFSYPYNYINPTKHNKKVGLGIYSKFPIINKGSLNLIDTSNDVIFADIIRNKDTIRVYNVHLQSLGLKPEKENFGQENSEKIKKKKKNGFQKQAE 537
            +NLKKQF+LSTLIL +GWF  P +YK +  ++S  +DLKVMSYNVRMFNYWNWIDD  IL+     + K+SPDILL QE ++    NF+Y Y Y+ P+K N   GL IYSKFPIINKGS +  +TSN++IFADI+RNKDTIR+YN+HLQSLGL  +K+NFGQENSEK+  + + GF+KQAE
Sbjct:   62 INLKKQFLLSTLILLLGWFIIPNIYKFSEKDTSEKNDLKVMSYNVRMFNYWNWIDDKNILENINNFLKKESPDILLFQEYFNQKGINFNYKYKYLKPSKLNSNFGLAIYSKFPIINKGSFDFNNTSNNIIFADILRNKDTIRIYNIHLQSLGLNTDKDNFGQENSEKLIARLQEGFKKQAE 242          
BLAST of mRNA_H-canaliculatus_M_contigs75372.1.1 vs.
Match: Endonuclease (n=2 Tax=Polaribacter TaxID=52959 RepID=A0A1B8U126_9FLAO)

HSP 1 Score: 226 bits (577), Expect = 6.410e-71
Identity = 111/180 (61.67%), Postives = 141/180 (78.33%), Query Frame = 1
Query:    1 VNLKKQFILSTLILTIGWFFTPTLYKVTANNSSFNDDLKVMSYNVRMFNYWNWIDDDEILQKTKKLVAKQSPDILLIQECYDFSN--FSYPYNYINPTKHNKKVGLGIYSKFPIINKGSLNLIDTSNDVIFADIIRNKDTIRVYNVHLQSLGLKPEKENFGQENSEKIKKKKKNGFQKQA 534
            +NLKKQ +LST+IL +GWFFTP  YK+T N SS NDDLKVM+YNVRMFN+W WIDD+ I +K    V +++PDILL QE Y      FSYPY YI     N K+GL IYSKFPIINKGSL L +TSN++IFADI++ KDTIR+YN+HLQSL L+P++ENFG+ +SE++  + K+GF+KQA
Sbjct:   62 INLKKQLLLSTIILVMGWFFTPPFYKLTENTSSLNDDLKVMTYNVRMFNHWKWIDDETIPKKINAFVEEKTPDILLFQEYYSLEKQQFSYPYKYIKTKNENAKIGLAIYSKFPIINKGSLELENTSNNIIFADIVKKKDTIRIYNLHLQSLQLRPDQENFGEADSERLIARLKDGFKKQA 241          
BLAST of mRNA_H-canaliculatus_M_contigs75372.1.1 vs.
Match: endonuclease/exonuclease/phosphatase (family protein n=1 Tax=Polaribacter litorisediminis TaxID=1908341 RepID=UPI001CC0C0BB)

HSP 1 Score: 224 bits (572), Expect = 3.650e-70
Identity = 116/181 (64.09%), Postives = 146/181 (80.66%), Query Frame = 1
Query:    1 VNLKKQFILSTLILTIGWFFTPTLYKVTANNSSFNDDLKVMSYNVRMFNYWNWIDDDEILQKTKKLVAKQSPDILLIQECY--DFSNFSYPYNYINPTKHNK-KVGLGIYSKFPIINKGSLNLIDTSNDVIFADIIRNKDTIRVYNVHLQSLGLKPEKENFGQENSEKIKKKKKNGFQKQA 534
            + LKKQ I+STLIL IGW+FTP LYK+T+N SS NDDLKVMSYNVRMFN+W WI+++ I QK  + V ++SPD+LL QE Y  +   FSYPY Y+  TK+NK K+GL IYSKFPIINKGSLNL +TSN++IF DI R KDT+RVYN+HLQSL L+ +KENFG+ENS+K+  + + GF+KQA
Sbjct:   62 LKLKKQLIVSTLILCIGWYFTPPLYKLTSNGSSLNDDLKVMSYNVRMFNHWKWINEENIPQKINEFVMEKSPDVLLFQEYYILEKQQFSYPYKYVK-TKNNKAKIGLAIYSKFPIINKGSLNLKNTSNNIIFVDIKRKKDTVRVYNLHLQSLELRTDKENFGEENSQKLIARLEEGFKKQA 241          
BLAST of mRNA_H-canaliculatus_M_contigs75372.1.1 vs.
Match: Endonuclease/exonuclease/phosphatase (family protein n=2 Tax=Polaribacter TaxID=52959 RepID=A0A5C6YB44_9FLAO)

HSP 1 Score: 224 bits (570), Expect = 7.310e-70
Identity = 118/180 (65.56%), Postives = 134/180 (74.44%), Query Frame = 1
Query:    1 VNLKKQFILSTLILTIGWFFTPTLYKVTANNSSFNDDLKVMSYNVRMFNYWNWIDDDEILQKTKKLVAKQSPDILLIQECYDFSN--FSYPYNYINPTKHNKKVGLGIYSKFPIINKGSLNLIDTSNDVIFADIIRNKDTIRVYNVHLQSLGLKPEKENFGQENSEKIKKKKKNGFQKQA 534
            + LKKQ ILS  +LTIGWFFTP +YK+T+N SS N DLKVMSYNVRMFN+W WI  D I QK  K V  +SPDILL QE Y      FSYPY YI       K+GL IYSKFPIIN GSL+L +TSN++IFADI R KDTIRVYN+HLQSL LK +KENFGQENSEK+  + K GF KQA
Sbjct:   62 IKLKKQLILSAFVLTIGWFFTPPIYKLTSNKSSLNTDLKVMSYNVRMFNHWKWIAGDSIPQKIHKFVVDKSPDILLFQEYYSLEKQQFSYPYKYIKTKTSKAKIGLAIYSKFPIINTGSLDLKNTSNNIIFADIKREKDTIRVYNLHLQSLQLKTDKENFGQENSEKLIARLKEGFIKQA 241          
BLAST of mRNA_H-canaliculatus_M_contigs75372.1.1 vs.
Match: endonuclease/exonuclease/phosphatase (family protein n=1 Tax=Polaribacter vadi TaxID=1774273 RepID=UPI001C084C11)

HSP 1 Score: 223 bits (568), Expect = 8.890e-70
Identity = 111/181 (61.33%), Postives = 138/181 (76.24%), Query Frame = 1
Query:    1 VNLKKQFILSTLILTIGWFFTPTLYKVTANNSSFNDDLKVMSYNVRMFNYWNWIDDDEILQKTKKLVAKQSPDILLIQECYDFS--NFSYPYNYINPTKHNKKVGLGIYSKFPIINKGSLNLIDTSNDVIFADIIRNKDTIRVYNVHLQSLGLKPEKENFGQENSEKIKKKKKNGFQKQAE 537
            +N+KKQF+LSTLIL +GWF  P +YK +    S  +DLKVMSYNVRMFNYWNWIDD +I +     +  +SPDILL QE Y+    NF+Y Y Y+ P+K N  VGL IYSKFPIINKGS +  +TSN++IFADI++ KDTIR+YN+HLQSLGL  +KENFGQENSEK+  + K GF+KQAE
Sbjct:   45 INIKKQFLLSTLILLLGWFIIPNIYKFSEKEISNKEDLKVMSYNVRMFNYWNWIDDKKIPENINNFIKNESPDILLFQEYYNQKGLNFNYKYKYLKPSKLNTNVGLVIYSKFPIINKGSFDFKNTSNNIIFADILKKKDTIRIYNIHLQSLGLNTDKENFGQENSEKLVARLKEGFKKQAE 225          
BLAST of mRNA_H-canaliculatus_M_contigs75372.1.1 vs.
Match: Metal-dependent (hydrolase, endonuclease/exonuclease/phosphatase family n=4 Tax=unclassified Polaribacter TaxID=196858 RepID=A0A1H2FS21_9FLAO)

HSP 1 Score: 217 bits (552), Expect = 4.150e-67
Identity = 113/181 (62.43%), Postives = 133/181 (73.48%), Query Frame = 1
Query:    1 VNLKKQFILSTLILTIGWFFTPTLYKVTANNSSFNDDLKVMSYNVRMFNYWNWIDDDEILQKTKKLVAKQSPDILLIQECYDFSN--FSYPYNYINPTKHNKKVGLGIYSKFPIINKGSLNLIDTSNDVIFADIIRNKDTIRVYNVHLQSLGLKPEKENFGQENSEKIKKKKKNGFQKQAE 537
            + LKK FI+S  IL IGWFF+ T YK T N SS NDDLKVMSYNVRMFN+W WIDD  I +K    V+++SPDILL QE Y      F YPY YI       K+GL IYSKFPII KGSL+L +TSN++IFADI+R KDTIRVYN+HLQS  L   +ENFGQENSEK+ ++ KN F+KQAE
Sbjct:   62 LKLKKHFIMSAFILVIGWFFSNTPYKFTENKSSLNDDLKVMSYNVRMFNHWKWIDDQNIPEKINAFVSEKSPDILLFQEYYTLEKQLFLYPYKYIKTKDEKNKIGLAIYSKFPIIQKGSLDLKNTSNNIIFADIVRKKDTIRVYNLHLQSFELNTSQENFGQENSEKLIERLKNRFKKQAE 242          
BLAST of mRNA_H-canaliculatus_M_contigs75372.1.1 vs.
Match: Endonuclease (n=2 Tax=Polaribacter glomeratus TaxID=102 RepID=A0A2S7WXL3_9FLAO)

HSP 1 Score: 216 bits (549), Expect = 1.080e-66
Identity = 109/181 (60.22%), Postives = 134/181 (74.03%), Query Frame = 1
Query:    1 VNLKKQFILSTLILTIGWFFTPTLYKVTANNSSFNDDLKVMSYNVRMFNYWNWIDDDEILQKTKKLVAKQSPDILLIQECYDFSN--FSYPYNYINPTKHNKKVGLGIYSKFPIINKGSLNLIDTSNDVIFADIIRNKDTIRVYNVHLQSLGLKPEKENFGQENSEKIKKKKKNGFQKQAE 537
            +  KKQF+LS +IL IGW F+   YK+T +NSS NDD+KVMSYNVRMFN+W WIDDD+I +  K  + +QSPDI+L QE Y+     F+YPY YI       K+GL IYSKFPI+N GSLNL  TSN++IFADI+R KDTIRVYN+HLQSL L   KENFGQ NSEK+  + K  F+KQA+
Sbjct:   62 LQFKKQFMLSAIILGIGWVFSTPFYKITESNSSLNDDIKVMSYNVRMFNHWKWIDDDKISKNIKTFITEQSPDIILFQEYYNLEKPLFNYPYKYIKTKNKQDKIGLAIYSKFPILNTGSLNLEHTSNNIIFADILRKKDTIRVYNLHLQSLQLNTSKENFGQANSEKLVARLKERFKKQAD 242          
BLAST of mRNA_H-canaliculatus_M_contigs75372.1.1 vs.
Match: Endonuclease/exonuclease/phosphatase (family protein n=3 Tax=Polaribacter TaxID=52959 RepID=A0A0N0CFW3_9FLAO)

HSP 1 Score: 206 bits (523), Expect = 2.180e-63
Identity = 105/181 (58.01%), Postives = 133/181 (73.48%), Query Frame = 1
Query:    1 VNLKKQFILSTLILTIGWFFTPTLYKVTANNSSFNDDLKVMSYNVRMFNYWNWIDDDEILQKTKKLVAKQSPDILLIQECY--DFSNFSYPYNYINPTKHNKKVGLGIYSKFPIINKGSLNLIDTSNDVIFADIIRNKDTIRVYNVHLQSLGLKPEKENFGQENSEKIKKKKKNGFQKQAE 537
            + LKKQF+LS LIL +G+F T  LYK     SS N DLK+MSYNVRMFN+W WI+DD+I +K    V+ + PDILL+QE +  D   F YPY YI   K N  +GL IYS + IINKGSL L DTSN++IFAD++++KDTIR+YN+HLQSL L  + ENFGQENSEK+  + + GF+KQAE
Sbjct:   13 IQLKKQFLLSALILGLGYFVTTPLYKFDEGKSSLNSDLKIMSYNVRMFNHWQWIEDDKIPEKISNFVSDKEPDILLLQEFHKTDSPKFDYPYKYIKLKKPNSTIGLAIYSNYKIINKGSLELSDTSNNIIFADVVKDKDTIRIYNLHLQSLELNTKAENFGQENSEKLLARLRAGFKKQAE 193          
BLAST of mRNA_H-canaliculatus_M_contigs75372.1.1 vs.
Match: Metal-dependent (hydrolase, endonuclease/exonuclease/phosphatase family n=1 Tax=Polaribacter sp. KT25b TaxID=1855336 RepID=A0A1H1MCC7_9FLAO)

HSP 1 Score: 204 bits (520), Expect = 2.540e-62
Identity = 104/181 (57.46%), Postives = 129/181 (71.27%), Query Frame = 1
Query:    1 VNLKKQFILSTLILTIGWFFTPTLYKVTANNSSFNDDLKVMSYNVRMFNYWNWIDDDEILQKTKKLVAKQSPDILLIQECYDFSN--FSYPYNYINPTKHNKKVGLGIYSKFPIINKGSLNLIDTSNDVIFADIIRNKDTIRVYNVHLQSLGLKPEKENFGQENSEKIKKKKKNGFQKQAE 537
            +  KKQ +LS +IL IGW F    +K+T +NSS NDD+KVMSYNVRMFN+W WIDD+ I +K    + ++SPDILL QE Y      F+YPY YI       K+GL IYSKFPIIN GSLNL  TSN++IFAD++R KDTIRVYN+HLQSL L  + ENFGQ N EK+  + K  F++QAE
Sbjct:   62 LQFKKQLLLSLIILVIGWLFITPFFKMTEHNSSLNDDVKVMSYNVRMFNHWQWIDDENISKKINAFITEKSPDILLFQEYYSLEKQQFNYPYKYIKTKNKKDKIGLAIYSKFPIINSGSLNLEHTSNNIIFADVLRKKDTIRVYNLHLQSLELNTKMENFGQANPEKLVARLKERFKQQAE 242          
BLAST of mRNA_H-canaliculatus_M_contigs75372.1.1 vs.
Match: Endonuclease/exonuclease/phosphatase (family protein n=2 Tax=Polaribacter sp. MED152 TaxID=313598 RepID=A2U2K9_9FLAO)

HSP 1 Score: 199 bits (506), Expect = 2.330e-60
Identity = 102/181 (56.35%), Postives = 132/181 (72.93%), Query Frame = 1
Query:    1 VNLKKQFILSTLILTIGWFFTPTLYKVTANNSSFNDDLKVMSYNVRMFNYWNWIDDDEILQKTKKLVAKQSPDILLIQECYDFSN--FSYPYNYINPTKHNKKVGLGIYSKFPIINKGSLNLIDTSNDVIFADIIRNKDTIRVYNVHLQSLGLKPEKENFGQENSEKIKKKKKNGFQKQAE 537
            + LKKQ +LS +IL IG+F T  LYK   + SS N DLK+MSYNVRMFN+W WI+++ I  K  + V+ + PDILL+QE ++  N  F+YPY YI     N  +GL IYS + IINKGSL L DTSN++IFAD+++ KDTIR+YN+HLQSL L  E ENFGQENSEK+  + + GF+KQAE
Sbjct:   50 LQLKKQLLLSAIILGIGYFVTSPLYKFDESRSSLNSDLKIMSYNVRMFNHWQWIEEEGIPNKISEFVSAKEPDILLLQEFHNSDNPSFNYPYKYIKLKNTNSNIGLAIYSNYKIINKGSLELTDTSNNIIFADVLKGKDTIRIYNLHLQSLELNAEAENFGQENSEKLLARLRAGFKKQAE 230          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs75372.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Endonuclease4.530e-7161.88n=2 Tax=Polaribacter reichenbachii TaxID=996801 Re... [more]
Endonuclease6.410e-7161.67n=2 Tax=Polaribacter TaxID=52959 RepID=A0A1B8U126_... [more]
endonuclease/exonuclease/phosphatase3.650e-7064.09family protein n=1 Tax=Polaribacter litorisedimini... [more]
Endonuclease/exonuclease/phosphatase7.310e-7065.56family protein n=2 Tax=Polaribacter TaxID=52959 Re... [more]
endonuclease/exonuclease/phosphatase8.890e-7061.33family protein n=1 Tax=Polaribacter vadi TaxID=177... [more]
Metal-dependent4.150e-6762.43hydrolase, endonuclease/exonuclease/phosphatase fa... [more]
Endonuclease1.080e-6660.22n=2 Tax=Polaribacter glomeratus TaxID=102 RepID=A0... [more]
Endonuclease/exonuclease/phosphatase2.180e-6358.01family protein n=3 Tax=Polaribacter TaxID=52959 Re... [more]
Metal-dependent2.540e-6257.46hydrolase, endonuclease/exonuclease/phosphatase fa... [more]
Endonuclease/exonuclease/phosphatase2.330e-6056.35family protein n=2 Tax=Polaribacter sp. MED152 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs75372contigH-canaliculatus_M_contigs75372:3..539 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1336803.PHEL49_2036
PFAMsExo_endo_phos
Model size537
Max annot lvl976|Bacteroidetes
Hectar predicted targeting categorysignal anchor
Exons1
Evalue6.82e-68
EggNOG OGsCOG3021@1|root,COG3021@2|Bacteria,4PKDH@976|Bacteroidetes,1HYUN@117743|Flavobacteriia,3VV7F@52959|Polaribacter
DescriptionEndonuclease/Exonuclease/phosphatase family
Cds size537
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854090.860166-CDS-H-canaliculatus_M_contigs75372:2..5391696854090.860166-CDS-H-canaliculatus_M_contigs75372:2..539Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs75372 3..539 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs75372.1.1prot_H-canaliculatus_M_contigs75372.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs75372 3..539 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs75372.1.1

>prot_H-canaliculatus_M_contigs75372.1.1 ID=prot_H-canaliculatus_M_contigs75372.1.1|Name=mRNA_H-canaliculatus_M_contigs75372.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=179bp
VNLKKQFILSTLILTIGWFFTPTLYKVTANNSSFNDDLKVMSYNVRMFNY
WNWIDDDEILQKTKKLVAKQSPDILLIQECYDFSNFSYPYNYINPTKHNK
KVGLGIYSKFPIINKGSLNLIDTSNDVIFADIIRNKDTIRVYNVHLQSLG
LKPEKENFGQENSEKIKKKKKNGFQKQAE
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mRNA from alignment at H-canaliculatus_M_contigs75372:3..539-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs75372.1.1 ID=mRNA_H-canaliculatus_M_contigs75372.1.1|Name=mRNA_H-canaliculatus_M_contigs75372.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=537bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75372:3..539- (Hapterophycus canaliculatus Oshoro7m male)
GTCAACCTAAAAAAACAATTTATATTATCTACTTTAATTTTAACTATTGG TTGGTTTTTTACGCCTACTTTGTATAAAGTAACAGCAAATAATTCTTCTT TTAATGATGACTTGAAAGTTATGAGTTATAACGTTAGAATGTTTAATTAT TGGAATTGGATTGACGATGACGAAATTCTTCAAAAAACAAAAAAATTAGT AGCAAAACAATCTCCAGATATTTTGTTAATTCAAGAATGTTATGATTTTA GTAATTTTTCTTATCCATATAATTATATAAATCCTACAAAACATAACAAA AAAGTCGGCTTAGGTATTTATTCTAAATTTCCGATTATCAATAAAGGCTC TTTAAATTTAATAGATACTTCTAATGATGTAATTTTTGCTGATATTATTA GAAATAAAGATACCATAAGAGTCTATAATGTGCATTTGCAATCACTAGGA CTTAAACCAGAAAAAGAGAATTTTGGACAAGAAAATTCTGAAAAAATAAA AAAAAAAAAAAAAAATGGGTTTCAAAAACAAGCAGAA
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs75372:3..539-

>mRNA_H-canaliculatus_M_contigs75372.1.1 ID=mRNA_H-canaliculatus_M_contigs75372.1.1|Name=mRNA_H-canaliculatus_M_contigs75372.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=537bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75372:3..539- (Hapterophycus canaliculatus Oshoro7m male)
GTCAACCTAAAAAAACAATTTATATTATCTACTTTAATTTTAACTATTGG
TTGGTTTTTTACGCCTACTTTGTATAAAGTAACAGCAAATAATTCTTCTT
TTAATGATGACTTGAAAGTTATGAGTTATAACGTTAGAATGTTTAATTAT
TGGAATTGGATTGACGATGACGAAATTCTTCAAAAAACAAAAAAATTAGT
AGCAAAACAATCTCCAGATATTTTGTTAATTCAAGAATGTTATGATTTTA
GTAATTTTTCTTATCCATATAATTATATAAATCCTACAAAACATAACAAA
AAAGTCGGCTTAGGTATTTATTCTAAATTTCCGATTATCAATAAAGGCTC
TTTAAATTTAATAGATACTTCTAATGATGTAATTTTTGCTGATATTATTA
GAAATAAAGATACCATAAGAGTCTATAATGTGCATTTGCAATCACTAGGA
CTTAAACCAGAAAAAGAGAATTTTGGACAAGAAAATTCTGAAAAAATAAA
AAAAAAAAAAAAAAATGGGTTTCAAAAACAAGCAGAA
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