mRNA_H-canaliculatus_M_contigs75372.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs75372.1.1 vs.
Match: Endonuclease (n=2 Tax=Polaribacter reichenbachii TaxID=996801 RepID=A0A1B8TPW1_9FLAO) HSP 1 Score: 227 bits (578), Expect = 4.530e-71 Identity = 112/181 (61.88%), Postives = 141/181 (77.90%), Query Frame = 1
Query: 1 VNLKKQFILSTLILTIGWFFTPTLYKVTANNSSFNDDLKVMSYNVRMFNYWNWIDDDEILQKTKKLVAKQSPDILLIQECYDFS--NFSYPYNYINPTKHNKKVGLGIYSKFPIINKGSLNLIDTSNDVIFADIIRNKDTIRVYNVHLQSLGLKPEKENFGQENSEKIKKKKKNGFQKQAE 537
+NLKKQF+LSTLIL +GWF P +YK + ++S +DLKVMSYNVRMFNYWNWIDD IL+ + K+SPDILL QE ++ NF+Y Y Y+ P+K N GL IYSKFPIINKGS + +TSN++IFADI+RNKDTIR+YN+HLQSLGL +K+NFGQENSEK+ + + GF+KQAE
Sbjct: 62 INLKKQFLLSTLILLLGWFIIPNIYKFSEKDTSEKNDLKVMSYNVRMFNYWNWIDDKNILENINNFLKKESPDILLFQEYFNQKGINFNYKYKYLKPSKLNSNFGLAIYSKFPIINKGSFDFNNTSNNIIFADILRNKDTIRIYNIHLQSLGLNTDKDNFGQENSEKLIARLQEGFKKQAE 242
BLAST of mRNA_H-canaliculatus_M_contigs75372.1.1 vs.
Match: Endonuclease (n=2 Tax=Polaribacter TaxID=52959 RepID=A0A1B8U126_9FLAO) HSP 1 Score: 226 bits (577), Expect = 6.410e-71 Identity = 111/180 (61.67%), Postives = 141/180 (78.33%), Query Frame = 1
Query: 1 VNLKKQFILSTLILTIGWFFTPTLYKVTANNSSFNDDLKVMSYNVRMFNYWNWIDDDEILQKTKKLVAKQSPDILLIQECYDFSN--FSYPYNYINPTKHNKKVGLGIYSKFPIINKGSLNLIDTSNDVIFADIIRNKDTIRVYNVHLQSLGLKPEKENFGQENSEKIKKKKKNGFQKQA 534
+NLKKQ +LST+IL +GWFFTP YK+T N SS NDDLKVM+YNVRMFN+W WIDD+ I +K V +++PDILL QE Y FSYPY YI N K+GL IYSKFPIINKGSL L +TSN++IFADI++ KDTIR+YN+HLQSL L+P++ENFG+ +SE++ + K+GF+KQA
Sbjct: 62 INLKKQLLLSTIILVMGWFFTPPFYKLTENTSSLNDDLKVMTYNVRMFNHWKWIDDETIPKKINAFVEEKTPDILLFQEYYSLEKQQFSYPYKYIKTKNENAKIGLAIYSKFPIINKGSLELENTSNNIIFADIVKKKDTIRIYNLHLQSLQLRPDQENFGEADSERLIARLKDGFKKQA 241
BLAST of mRNA_H-canaliculatus_M_contigs75372.1.1 vs.
Match: endonuclease/exonuclease/phosphatase (family protein n=1 Tax=Polaribacter litorisediminis TaxID=1908341 RepID=UPI001CC0C0BB) HSP 1 Score: 224 bits (572), Expect = 3.650e-70 Identity = 116/181 (64.09%), Postives = 146/181 (80.66%), Query Frame = 1
Query: 1 VNLKKQFILSTLILTIGWFFTPTLYKVTANNSSFNDDLKVMSYNVRMFNYWNWIDDDEILQKTKKLVAKQSPDILLIQECY--DFSNFSYPYNYINPTKHNK-KVGLGIYSKFPIINKGSLNLIDTSNDVIFADIIRNKDTIRVYNVHLQSLGLKPEKENFGQENSEKIKKKKKNGFQKQA 534
+ LKKQ I+STLIL IGW+FTP LYK+T+N SS NDDLKVMSYNVRMFN+W WI+++ I QK + V ++SPD+LL QE Y + FSYPY Y+ TK+NK K+GL IYSKFPIINKGSLNL +TSN++IF DI R KDT+RVYN+HLQSL L+ +KENFG+ENS+K+ + + GF+KQA
Sbjct: 62 LKLKKQLIVSTLILCIGWYFTPPLYKLTSNGSSLNDDLKVMSYNVRMFNHWKWINEENIPQKINEFVMEKSPDVLLFQEYYILEKQQFSYPYKYVK-TKNNKAKIGLAIYSKFPIINKGSLNLKNTSNNIIFVDIKRKKDTVRVYNLHLQSLELRTDKENFGEENSQKLIARLEEGFKKQA 241
BLAST of mRNA_H-canaliculatus_M_contigs75372.1.1 vs.
Match: Endonuclease/exonuclease/phosphatase (family protein n=2 Tax=Polaribacter TaxID=52959 RepID=A0A5C6YB44_9FLAO) HSP 1 Score: 224 bits (570), Expect = 7.310e-70 Identity = 118/180 (65.56%), Postives = 134/180 (74.44%), Query Frame = 1
Query: 1 VNLKKQFILSTLILTIGWFFTPTLYKVTANNSSFNDDLKVMSYNVRMFNYWNWIDDDEILQKTKKLVAKQSPDILLIQECYDFSN--FSYPYNYINPTKHNKKVGLGIYSKFPIINKGSLNLIDTSNDVIFADIIRNKDTIRVYNVHLQSLGLKPEKENFGQENSEKIKKKKKNGFQKQA 534
+ LKKQ ILS +LTIGWFFTP +YK+T+N SS N DLKVMSYNVRMFN+W WI D I QK K V +SPDILL QE Y FSYPY YI K+GL IYSKFPIIN GSL+L +TSN++IFADI R KDTIRVYN+HLQSL LK +KENFGQENSEK+ + K GF KQA
Sbjct: 62 IKLKKQLILSAFVLTIGWFFTPPIYKLTSNKSSLNTDLKVMSYNVRMFNHWKWIAGDSIPQKIHKFVVDKSPDILLFQEYYSLEKQQFSYPYKYIKTKTSKAKIGLAIYSKFPIINTGSLDLKNTSNNIIFADIKREKDTIRVYNLHLQSLQLKTDKENFGQENSEKLIARLKEGFIKQA 241
BLAST of mRNA_H-canaliculatus_M_contigs75372.1.1 vs.
Match: endonuclease/exonuclease/phosphatase (family protein n=1 Tax=Polaribacter vadi TaxID=1774273 RepID=UPI001C084C11) HSP 1 Score: 223 bits (568), Expect = 8.890e-70 Identity = 111/181 (61.33%), Postives = 138/181 (76.24%), Query Frame = 1
Query: 1 VNLKKQFILSTLILTIGWFFTPTLYKVTANNSSFNDDLKVMSYNVRMFNYWNWIDDDEILQKTKKLVAKQSPDILLIQECYDFS--NFSYPYNYINPTKHNKKVGLGIYSKFPIINKGSLNLIDTSNDVIFADIIRNKDTIRVYNVHLQSLGLKPEKENFGQENSEKIKKKKKNGFQKQAE 537
+N+KKQF+LSTLIL +GWF P +YK + S +DLKVMSYNVRMFNYWNWIDD +I + + +SPDILL QE Y+ NF+Y Y Y+ P+K N VGL IYSKFPIINKGS + +TSN++IFADI++ KDTIR+YN+HLQSLGL +KENFGQENSEK+ + K GF+KQAE
Sbjct: 45 INIKKQFLLSTLILLLGWFIIPNIYKFSEKEISNKEDLKVMSYNVRMFNYWNWIDDKKIPENINNFIKNESPDILLFQEYYNQKGLNFNYKYKYLKPSKLNTNVGLVIYSKFPIINKGSFDFKNTSNNIIFADILKKKDTIRIYNIHLQSLGLNTDKENFGQENSEKLVARLKEGFKKQAE 225
BLAST of mRNA_H-canaliculatus_M_contigs75372.1.1 vs.
Match: Metal-dependent (hydrolase, endonuclease/exonuclease/phosphatase family n=4 Tax=unclassified Polaribacter TaxID=196858 RepID=A0A1H2FS21_9FLAO) HSP 1 Score: 217 bits (552), Expect = 4.150e-67 Identity = 113/181 (62.43%), Postives = 133/181 (73.48%), Query Frame = 1
Query: 1 VNLKKQFILSTLILTIGWFFTPTLYKVTANNSSFNDDLKVMSYNVRMFNYWNWIDDDEILQKTKKLVAKQSPDILLIQECYDFSN--FSYPYNYINPTKHNKKVGLGIYSKFPIINKGSLNLIDTSNDVIFADIIRNKDTIRVYNVHLQSLGLKPEKENFGQENSEKIKKKKKNGFQKQAE 537
+ LKK FI+S IL IGWFF+ T YK T N SS NDDLKVMSYNVRMFN+W WIDD I +K V+++SPDILL QE Y F YPY YI K+GL IYSKFPII KGSL+L +TSN++IFADI+R KDTIRVYN+HLQS L +ENFGQENSEK+ ++ KN F+KQAE
Sbjct: 62 LKLKKHFIMSAFILVIGWFFSNTPYKFTENKSSLNDDLKVMSYNVRMFNHWKWIDDQNIPEKINAFVSEKSPDILLFQEYYTLEKQLFLYPYKYIKTKDEKNKIGLAIYSKFPIIQKGSLDLKNTSNNIIFADIVRKKDTIRVYNLHLQSFELNTSQENFGQENSEKLIERLKNRFKKQAE 242
BLAST of mRNA_H-canaliculatus_M_contigs75372.1.1 vs.
Match: Endonuclease (n=2 Tax=Polaribacter glomeratus TaxID=102 RepID=A0A2S7WXL3_9FLAO) HSP 1 Score: 216 bits (549), Expect = 1.080e-66 Identity = 109/181 (60.22%), Postives = 134/181 (74.03%), Query Frame = 1
Query: 1 VNLKKQFILSTLILTIGWFFTPTLYKVTANNSSFNDDLKVMSYNVRMFNYWNWIDDDEILQKTKKLVAKQSPDILLIQECYDFSN--FSYPYNYINPTKHNKKVGLGIYSKFPIINKGSLNLIDTSNDVIFADIIRNKDTIRVYNVHLQSLGLKPEKENFGQENSEKIKKKKKNGFQKQAE 537
+ KKQF+LS +IL IGW F+ YK+T +NSS NDD+KVMSYNVRMFN+W WIDDD+I + K + +QSPDI+L QE Y+ F+YPY YI K+GL IYSKFPI+N GSLNL TSN++IFADI+R KDTIRVYN+HLQSL L KENFGQ NSEK+ + K F+KQA+
Sbjct: 62 LQFKKQFMLSAIILGIGWVFSTPFYKITESNSSLNDDIKVMSYNVRMFNHWKWIDDDKISKNIKTFITEQSPDIILFQEYYNLEKPLFNYPYKYIKTKNKQDKIGLAIYSKFPILNTGSLNLEHTSNNIIFADILRKKDTIRVYNLHLQSLQLNTSKENFGQANSEKLVARLKERFKKQAD 242
BLAST of mRNA_H-canaliculatus_M_contigs75372.1.1 vs.
Match: Endonuclease/exonuclease/phosphatase (family protein n=3 Tax=Polaribacter TaxID=52959 RepID=A0A0N0CFW3_9FLAO) HSP 1 Score: 206 bits (523), Expect = 2.180e-63 Identity = 105/181 (58.01%), Postives = 133/181 (73.48%), Query Frame = 1
Query: 1 VNLKKQFILSTLILTIGWFFTPTLYKVTANNSSFNDDLKVMSYNVRMFNYWNWIDDDEILQKTKKLVAKQSPDILLIQECY--DFSNFSYPYNYINPTKHNKKVGLGIYSKFPIINKGSLNLIDTSNDVIFADIIRNKDTIRVYNVHLQSLGLKPEKENFGQENSEKIKKKKKNGFQKQAE 537
+ LKKQF+LS LIL +G+F T LYK SS N DLK+MSYNVRMFN+W WI+DD+I +K V+ + PDILL+QE + D F YPY YI K N +GL IYS + IINKGSL L DTSN++IFAD++++KDTIR+YN+HLQSL L + ENFGQENSEK+ + + GF+KQAE
Sbjct: 13 IQLKKQFLLSALILGLGYFVTTPLYKFDEGKSSLNSDLKIMSYNVRMFNHWQWIEDDKIPEKISNFVSDKEPDILLLQEFHKTDSPKFDYPYKYIKLKKPNSTIGLAIYSNYKIINKGSLELSDTSNNIIFADVVKDKDTIRIYNLHLQSLELNTKAENFGQENSEKLLARLRAGFKKQAE 193
BLAST of mRNA_H-canaliculatus_M_contigs75372.1.1 vs.
Match: Metal-dependent (hydrolase, endonuclease/exonuclease/phosphatase family n=1 Tax=Polaribacter sp. KT25b TaxID=1855336 RepID=A0A1H1MCC7_9FLAO) HSP 1 Score: 204 bits (520), Expect = 2.540e-62 Identity = 104/181 (57.46%), Postives = 129/181 (71.27%), Query Frame = 1
Query: 1 VNLKKQFILSTLILTIGWFFTPTLYKVTANNSSFNDDLKVMSYNVRMFNYWNWIDDDEILQKTKKLVAKQSPDILLIQECYDFSN--FSYPYNYINPTKHNKKVGLGIYSKFPIINKGSLNLIDTSNDVIFADIIRNKDTIRVYNVHLQSLGLKPEKENFGQENSEKIKKKKKNGFQKQAE 537
+ KKQ +LS +IL IGW F +K+T +NSS NDD+KVMSYNVRMFN+W WIDD+ I +K + ++SPDILL QE Y F+YPY YI K+GL IYSKFPIIN GSLNL TSN++IFAD++R KDTIRVYN+HLQSL L + ENFGQ N EK+ + K F++QAE
Sbjct: 62 LQFKKQLLLSLIILVIGWLFITPFFKMTEHNSSLNDDVKVMSYNVRMFNHWQWIDDENISKKINAFITEKSPDILLFQEYYSLEKQQFNYPYKYIKTKNKKDKIGLAIYSKFPIINSGSLNLEHTSNNIIFADVLRKKDTIRVYNLHLQSLELNTKMENFGQANPEKLVARLKERFKQQAE 242
BLAST of mRNA_H-canaliculatus_M_contigs75372.1.1 vs.
Match: Endonuclease/exonuclease/phosphatase (family protein n=2 Tax=Polaribacter sp. MED152 TaxID=313598 RepID=A2U2K9_9FLAO) HSP 1 Score: 199 bits (506), Expect = 2.330e-60 Identity = 102/181 (56.35%), Postives = 132/181 (72.93%), Query Frame = 1
Query: 1 VNLKKQFILSTLILTIGWFFTPTLYKVTANNSSFNDDLKVMSYNVRMFNYWNWIDDDEILQKTKKLVAKQSPDILLIQECYDFSN--FSYPYNYINPTKHNKKVGLGIYSKFPIINKGSLNLIDTSNDVIFADIIRNKDTIRVYNVHLQSLGLKPEKENFGQENSEKIKKKKKNGFQKQAE 537
+ LKKQ +LS +IL IG+F T LYK + SS N DLK+MSYNVRMFN+W WI+++ I K + V+ + PDILL+QE ++ N F+YPY YI N +GL IYS + IINKGSL L DTSN++IFAD+++ KDTIR+YN+HLQSL L E ENFGQENSEK+ + + GF+KQAE
Sbjct: 50 LQLKKQLLLSAIILGIGYFVTSPLYKFDESRSSLNSDLKIMSYNVRMFNHWQWIEEEGIPNKISEFVSAKEPDILLLQEFHNSDNPSFNYPYKYIKLKNTNSNIGLAIYSNYKIINKGSLELTDTSNNIIFADVLKGKDTIRIYNLHLQSLELNAEAENFGQENSEKLLARLRAGFKKQAE 230 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs75372.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs75372.1.1 >prot_H-canaliculatus_M_contigs75372.1.1 ID=prot_H-canaliculatus_M_contigs75372.1.1|Name=mRNA_H-canaliculatus_M_contigs75372.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=179bp VNLKKQFILSTLILTIGWFFTPTLYKVTANNSSFNDDLKVMSYNVRMFNYback to top mRNA from alignment at H-canaliculatus_M_contigs75372:3..539- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs75372.1.1 ID=mRNA_H-canaliculatus_M_contigs75372.1.1|Name=mRNA_H-canaliculatus_M_contigs75372.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=537bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75372:3..539- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs75372:3..539- >mRNA_H-canaliculatus_M_contigs75372.1.1 ID=mRNA_H-canaliculatus_M_contigs75372.1.1|Name=mRNA_H-canaliculatus_M_contigs75372.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=537bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75372:3..539- (Hapterophycus canaliculatus Oshoro7m male)back to top |