mRNA_H-canaliculatus_M_contigs75370.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs75370.1.1
Unique NamemRNA_H-canaliculatus_M_contigs75370.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs75370.1.1 vs.
Match: Imidazole (acetol-phosphate transaminase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KK66_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 1.140e-26
Identity = 51/60 (85.00%), Postives = 54/60 (90.00%), Query Frame = 1 
Query:   46 IQLDQAQEIYKSMANNGVVVRFRGNELHCKDCLRVTVGTVEENNRFLELLEKTVAAVSIP 225
            +Q+D AQEIYK MANNGVVVRFRGNELHCKDCLRVTVGT EENNR LELLEKTVA +S P
Sbjct:  341 VQVDHAQEIYKRMANNGVVVRFRGNELHCKDCLRVTVGTAEENNRLLELLEKTVATISAP 400
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BLAST of mRNA_H-canaliculatus_M_contigs75370.1.1 vs.
Match: Imidazole (acetol-phosphate transaminase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1XHV7_HETAK)

HSP 1 Score: 84.0 bits (206), Expect = 2.490e-17
Identity = 38/54 (70.37%), Postives = 43/54 (79.63%), Query Frame = 1 
Query:   49 QLDQAQEIYKSMANNGVVVRFRGNELHCKDCLRVTVGTVEENNRFLELLEKTVA 210
            Q+D AQ IYK MA NG VVRFRGNELHC DC+R TVGT EEN++ LE+LE T A
Sbjct:  326 QIDHAQAIYKDMAENGCVVRFRGNELHCTDCIRATVGTAEENDKMLEMLEATHA 379
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BLAST of mRNA_H-canaliculatus_M_contigs75370.1.1 vs.
Match: Imidazole (acetol-phosphate transaminase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9P4_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 2.650e-16
Identity = 37/57 (64.91%), Postives = 43/57 (75.44%), Query Frame = 1 
Query:   46 IQLDQAQEIYKSMANNGVVVRFRGNELHCKDCLRVTVGTVEENNRFLELLEKTVAAV 216
            ++++ A  IY  MA NGVVVRFRGNELHC DCLR+TVGT EEN + LELL  TV  V
Sbjct:  349 VEIEHAHTIYLHMAENGVVVRFRGNELHCTDCLRITVGTAEENAKLLELLRATVKGV 405
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BLAST of mRNA_H-canaliculatus_M_contigs75370.1.1 vs.
Match: uncharacterized (protein LOC110054690 n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E5AE7C)

HSP 1 Score: 74.7 bits (182), Expect = 2.430e-15
Identity = 32/58 (55.17%), Postives = 48/58 (82.76%), Query Frame = 1 
Query:   46 IQLDQAQEIYKSMANN-GVVVRFRGNELHCKDCLRVTVGTVEENNRFLELLEKTVAAV 216
            +++D AQ+IYK MA+  GVV+R++GN++HCKDC+R+TVGT E+N   L+ L+KTVA +
Sbjct:   76 LRIDHAQKIYKKMASEKGVVIRYQGNKIHCKDCVRITVGTPEQNRVLLDTLKKTVAEI 133
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BLAST of mRNA_H-canaliculatus_M_contigs75370.1.1 vs.
Match: Histidinol-phosphate (aminotransferase n=3 Tax=Balneolaceae TaxID=1813606 RepID=A0A2D8CKP2_9BACT)

HSP 1 Score: 75.9 bits (185), Expect = 1.800e-14
Identity = 32/60 (53.33%), Postives = 43/60 (71.67%), Query Frame = 1 
Query:   22 PVDTAEPTIQLDQAQEIYKSMANNGVVVRFRGNELHCKDCLRVTVGTVEENNRFLELLEK 201
            P D      ++  A E+YK MAN GV++R+RGNE HC+DCLR+T+GT  EN+RF E LE+
Sbjct:  290 PTDANFVLFKIQNALEVYKKMANQGVIIRYRGNEPHCEDCLRLTIGTAAENDRFFEALEQ 349
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BLAST of mRNA_H-canaliculatus_M_contigs75370.1.1 vs.
Match: Imidazole (acetol-phosphate transaminase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKC7_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 2.530e-14
Identity = 34/61 (55.74%), Postives = 45/61 (73.77%), Query Frame = 1 
Query:   22 PVDTAEPTIQLDQAQEIYKSMANNGVVVRFRGNELHCKDCLRVTVGTVEENNRFLELLEKT 204
            P DT     ++ +AQEIY+ MA  GVV RFRG+ELHCKDC+R+T+G   EN+ FL+L +KT
Sbjct:  470 PSDTNFILFEVPRAQEIYRDMAEAGVVARFRGHELHCKDCIRLTIGQAHENDTFLDLFKKT 530
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BLAST of mRNA_H-canaliculatus_M_contigs75370.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XKP5_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 6.180e-14
Identity = 31/49 (63.27%), Postives = 39/49 (79.59%), Query Frame = 1 
Query:   55 DQAQEIYKSMANNGVVVRFRGNELHCKDCLRVTVGTVEENNRFLELLEK 201
            D+A+  Y  MAN GVV RFRGNE+HCK+C+RVT+G+ EEN +FLE L K
Sbjct:   78 DKAKSSYTLMANRGVVTRFRGNEMHCKECIRVTIGSKEENVKFLEELPK 126
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BLAST of mRNA_H-canaliculatus_M_contigs75370.1.1 vs.
Match: Imidazole (acetol-phosphate transaminase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BPZ8_THAPS)

HSP 1 Score: 74.3 bits (181), Expect = 7.430e-14
Identity = 31/47 (65.96%), Postives = 40/47 (85.11%), Query Frame = 1 
Query:   58 QAQEIYKSMANNGVVVRFRGNELHCKDCLRVTVGTVEENNRFLELLE 198
            +A E+YK MA+ GVV RFRGNELHC +C+RVT+GT +EN +FLE+LE
Sbjct:  331 KANEVYKMMADKGVVSRFRGNELHCNECIRVTIGTPDENKQFLEMLE 377
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BLAST of mRNA_H-canaliculatus_M_contigs75370.1.1 vs.
Match: Imidazole (acetol-phosphate transaminase n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FHM3_9EUKA)

HSP 1 Score: 73.6 bits (179), Expect = 1.260e-13
Identity = 30/66 (45.45%), Postives = 46/66 (69.70%), Query Frame = 1 
Query:   22 PVDTAEPTIQLDQAQEIYKSMANNGVVVRFRGNELHCKDCLRVTVGTVEENNRFLELLEKTVAAVS 219
            P D     +Q+D + E+YK MA+ GVV+R+RG++ HC DC+R+T+GT +EN + L LL +  A +S
Sbjct:  291 PTDANFLLVQIDHSLEVYKRMADRGVVIRYRGDQTHCDDCVRITIGTADENEKMLSLLREIAAELS 356
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs75370.1.1 vs.
Match: Histidinol-phosphate (aminotransferase n=1 Tax=Gracilimonas mengyeensis TaxID=1302730 RepID=A0A521DFF6_9BACT)

HSP 1 Score: 73.2 bits (178), Expect = 1.680e-13
Identity = 32/58 (55.17%), Postives = 43/58 (74.14%), Query Frame = 1 
Query:   22 PVDTAEPTIQLDQAQEIYKSMANNGVVVRFRGNELHCKDCLRVTVGTVEENNRFLELL 195
            P D      ++D AQE+YK +A+ GV+VR+RGNE HC++CLR+TVGT  EN+RF E L
Sbjct:  289 PTDANFVMFRIDDAQEVYKKLADEGVIVRYRGNEPHCENCLRLTVGTSVENDRFFEAL 346
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs75370.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Imidazole1.140e-2685.00acetol-phosphate transaminase n=2 Tax=Ectocarpus T... [more]
Imidazole2.490e-1770.37acetol-phosphate transaminase n=1 Tax=Heterosigma ... [more]
Imidazole2.650e-1664.91acetol-phosphate transaminase n=1 Tax=Tribonema mi... [more]
uncharacterized2.430e-1555.17protein LOC110054690 n=1 Tax=Orbicella faveolata T... [more]
Histidinol-phosphate1.800e-1453.33aminotransferase n=3 Tax=Balneolaceae TaxID=181360... [more]
Imidazole2.530e-1455.74acetol-phosphate transaminase n=2 Tax=Monodopsidac... [more]
Hypothetical6.180e-1463.27protein n=1 Tax=Attheya septentrionalis TaxID=4202... [more]
Imidazole7.430e-1465.96acetol-phosphate transaminase n=1 Tax=Thalassiosir... [more]
Imidazole1.260e-1345.45acetol-phosphate transaminase n=1 Tax=Sphaeroforma... [more]
Histidinol-phosphate1.680e-1355.17aminotransferase n=1 Tax=Gracilimonas mengyeensis ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs75370contigH-canaliculatus_M_contigs75370:111..341 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FPJ8
Preferred nameHIS5
PFAMsAminotran_1_2
Model size231
Max annot lvl2759|Eukaryota
KEGG rclassRC00006,RC00888,RC00945
KEGG koko:K00817,ko:K01814
KEGG ReactionR00694,R00734,R03243,R04640
KEGG Pathwayko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230
KEGG ModuleM00026
Hectar predicted targeting categoryother localisation
GOsGO:0000105,GO:0003674,GO:0003824,GO:0004400,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0010035,GO:0010038,GO:0010045,GO:0016053,GO:0016740,GO:0016769,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046483,GO:0050896,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
Exons1
Evalue3.63e-27
EggNOG OGsCOG0079@1|root,KOG0633@2759|Eukaryota
EC2.6.1.9,5.3.1.16
Descriptionhistidinol-phosphate transaminase activity
Cds size231
COG categoryE
BiGG ReactioniMM904.YIL116W,iND750.YIL116W
BRITEko00000,ko00001,ko00002,ko01000,ko01007
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854090.8170953-CDS-H-canaliculatus_M_contigs75370:110..3411696854090.8170953-CDS-H-canaliculatus_M_contigs75370:110..341Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs75370 111..341 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs75370.1.1prot_H-canaliculatus_M_contigs75370.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs75370 111..341 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs75370.1.1

>prot_H-canaliculatus_M_contigs75370.1.1 ID=prot_H-canaliculatus_M_contigs75370.1.1|Name=mRNA_H-canaliculatus_M_contigs75370.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=77bp
PPLATTSPVDTAEPTIQLDQAQEIYKSMANNGVVVRFRGNELHCKDCLRV
TVGTVEENNRFLELLEKTVAAVSIPK*
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mRNA from alignment at H-canaliculatus_M_contigs75370:111..341-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs75370.1.1 ID=mRNA_H-canaliculatus_M_contigs75370.1.1|Name=mRNA_H-canaliculatus_M_contigs75370.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=231bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75370:111..341- (Hapterophycus canaliculatus Oshoro7m male)
CCTCCGCTGGCAACAACGTCACCTGTGGATACCGCCGAACCGACAATTCA
GTTGGATCAGGCGCAGGAGATCTACAAGAGCATGGCCAACAACGGAGTTG
TGGTACGTTTCCGCGGAAACGAACTGCACTGCAAGGACTGCTTGCGCGTG
ACAGTTGGGACGGTGGAAGAGAATAACCGCTTCTTGGAACTCCTAGAGAA
GACCGTCGCAGCGGTTTCAATTCCCAAGTGA
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs75370:111..341-

>mRNA_H-canaliculatus_M_contigs75370.1.1 ID=mRNA_H-canaliculatus_M_contigs75370.1.1|Name=mRNA_H-canaliculatus_M_contigs75370.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=231bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75370:111..341- (Hapterophycus canaliculatus Oshoro7m male)
CCTCCGCTGGCAACAACGTCACCTGTGGATACCGCCGAACCGACAATTCA
GTTGGATCAGGCGCAGGAGATCTACAAGAGCATGGCCAACAACGGAGTTG
TGGTACGTTTCCGCGGAAACGAACTGCACTGCAAGGACTGCTTGCGCGTG
ACAGTTGGGACGGTGGAAGAGAATAACCGCTTCTTGGAACTCCTAGAGAA
GACCGTCGCAGCGGTTTCAATTCCCAAGTGA
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