mRNA_H-canaliculatus_M_contigs7524.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7524.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRK3_ECTSI) HSP 1 Score: 142 bits (359), Expect = 6.050e-39 Identity = 69/96 (71.88%), Postives = 78/96 (81.25%), Query Frame = 1
Query: 1 YQSSKVLTIAGEGFNPAGTRFRFGNTLVEGKNYTVSVASVSATFTLVDGSKWRQNTAALPGPLVLLSADYGDGFVPLGATTAKAGRKVATIFADPK 288
YQSSKVLTIAG+GFN TRFRFGN L+EGKN+T V SATFTL +GSKWRQ+ A P PL+LL+AD GDGFVPLGAT AK GRKVATI+ DP+
Sbjct: 181 YQSSKVLTIAGQGFNTGNTRFRFGNGLLEGKNFTQIVTPESATFTLEEGSKWRQDAPAWPAPLILLAADAGDGFVPLGATIAKTGRKVATIYEDPR 276
BLAST of mRNA_H-canaliculatus_M_contigs7524.1.1 vs.
Match: Trypsin (domain protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRJ9_ECTSI) HSP 1 Score: 144 bits (363), Expect = 5.030e-38 Identity = 71/96 (73.96%), Postives = 80/96 (83.33%), Query Frame = 1
Query: 1 YQSSKVLTIAGEGFNPAGTRFRFGNTLVEGKNYTVSVASVSATFTLVDGSKWRQNTAALPGPLVLLSADYGDGFVPLGATTAKAGRKVATIFADPK 288
YQSSKVLTIAG+GFN + TRFRF N+LVEGKN+T V SATF L +GSKWRQ+ + P PLVLL+AD GDGFVPLGATTAKAGRKVATIF DP+
Sbjct: 181 YQSSKVLTIAGQGFNSSYTRFRFANSLVEGKNFTQVVTPESATFALEEGSKWRQDAPSWPAPLVLLAADAGDGFVPLGATTAKAGRKVATIFEDPR 276
BLAST of mRNA_H-canaliculatus_M_contigs7524.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDJ8_9PHAE) HSP 1 Score: 129 bits (324), Expect = 3.490e-35 Identity = 65/96 (67.71%), Postives = 78/96 (81.25%), Query Frame = 1
Query: 1 YQSSKVLTIAGEGFNPAGTRFRFGNTLVEGKNYTVSVASVSATFTLVDGSKWRQNTAALPGPLVLLSADYGDGFVPLGATTAKAGRKVATIFADPK 288
YQSSKVLTIAG+GFN + T+FRF ++VEG+NYT V SATFTL +GSKWRQ+ + P PLVLL+A+ GDGFVPLGAT KAGRKVATI+ DP+
Sbjct: 159 YQSSKVLTIAGQGFNASYTKFRFAASIVEGRNYTQVVTPESATFTLEEGSKWRQDAPSWPTPLVLLAANAGDGFVPLGAT--KAGRKVATIYEDPR 252
BLAST of mRNA_H-canaliculatus_M_contigs7524.1.1 vs.
Match: Peptidase (S1 and S6, chymotrypsin/Hap n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLV2_9STRA) HSP 1 Score: 101 bits (251), Expect = 6.880e-23 Identity = 56/97 (57.73%), Postives = 62/97 (63.92%), Query Frame = 1
Query: 1 YQSSKVLTIAGEGFNPAGTRFRFGNTLVEG-KNYTVS-VASVSATFTLVDGSKWRQNTAALPGPLVLLSADYGDGFVPLGATTAKAGRKVATIFADP 285
YQS+ L I G GFNP GT+ RF N L G NYT S V T L GSKWR N LPG LVLL+AD G GFV LGAT K+GRKVAT++ DP
Sbjct: 236 YQSTPTLEIDGVGFNPDGTQLRFANGLRGGGANYTASTVTPTRMTLDLAPGSKWRGNVDNLPGALVLLAADAGAGFVALGATAVKSGRKVATVYEDP 332
BLAST of mRNA_H-canaliculatus_M_contigs7524.1.1 vs.
Match: Peptidase (S1 and S6, chymotrypsin/Hap n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG95_ECTSI) HSP 1 Score: 99.8 bits (247), Expect = 2.390e-22 Identity = 55/97 (56.70%), Postives = 67/97 (69.07%), Query Frame = 1
Query: 1 YQSSKVLTIAGEGFNPAGTRFRFGNTLVEG-KNYTVSVASVSA-TFTLVDGSKWRQNTAALPGPLVLLSADYGDGFVPLGATTAKAGRKVATIFADP 285
YQSSK I+G GF GT+ RF N L G N+T++ + T L +GSKWR+N +ALPG LVLL+AD GDG+VPLG T AKAG KVAT+F DP
Sbjct: 232 YQSSKSFQISGSGFVD-GTKVRFANALRGGGTNFTITDSQPELLTLELAEGSKWRKNPSALPGALVLLAADSGDGWVPLGPTQAKAGSKVATVFEDP 327
BLAST of mRNA_H-canaliculatus_M_contigs7524.1.1 vs.
Match: Hypothetical (protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A1T6_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 4.450e-22 Identity = 55/99 (55.56%), Postives = 66/99 (66.67%), Query Frame = 1
Query: 1 YQSSKVLTIAGEGFNPAG--TRFRFGNTLV-EGKNYTVSVASVSA-TFTLVDGSKWRQNTAALPGPLVLLSADYGDGFVPLGATTAKAGRKVATIFADP 285
YQS+ L + G GFN R R+GN L G NYTV+ A+ +A T +L+ GSKWR N A LPGPL LL+ D G G VP+GAT AK GR VATI+ADP
Sbjct: 238 YQSAPELKVIGHGFNETAPMNRLRWGNKLQGRGVNYTVTSATTNALTLSLLAGSKWRPNAANLPGPLTLLAVDAGAGLVPVGATDAKKGRVVATIYADP 336
BLAST of mRNA_H-canaliculatus_M_contigs7524.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XT65_HETAK) HSP 1 Score: 97.4 bits (241), Expect = 1.540e-21 Identity = 51/97 (52.58%), Postives = 62/97 (63.92%), Query Frame = 1
Query: 1 YQSSKVLTIAGEGFNPAGTRFRFGNTLV-EGKNYTVSVASV-SATFTLVDGSKWRQNTAALPGPLVLLSADYGDGFVPLGATTAKAGRKVATIFADP 285
YQS+ + I G GFNP GT+ RF N L G NYT A+ S T L G KWR+N LPGPL +L+AD G G+V LGAT AK GR +AT++ DP
Sbjct: 274 YQSTPTVMITGSGFNPEGTKLRFYNNLRGSGANYTTIAATPNSLTLQLNPGVKWRENVRQLPGPLTVLAADGGAGWVALGATAAKRGRTIATVYEDP 370
BLAST of mRNA_H-canaliculatus_M_contigs7524.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XT52_HETAK) HSP 1 Score: 97.4 bits (241), Expect = 1.550e-21 Identity = 51/97 (52.58%), Postives = 62/97 (63.92%), Query Frame = 1
Query: 1 YQSSKVLTIAGEGFNPAGTRFRFGNTLV-EGKNYTVSVASV-SATFTLVDGSKWRQNTAALPGPLVLLSADYGDGFVPLGATTAKAGRKVATIFADP 285
YQS+ + I G GFNP GT+ RF N L G NYT A+ S T L G KWR+N LPGPL +L+AD G G+V LGAT AK GR +AT++ DP
Sbjct: 274 YQSTPTVMITGSGFNPEGTKLRFYNNLRGSGANYTTIAATPNSLTLQLNPGVKWRENVRQLPGPLTVLAADGGAGWVALGATAAKRGRTIATVYEDP 370
BLAST of mRNA_H-canaliculatus_M_contigs7524.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM60_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 1.010e-20 Identity = 51/93 (54.84%), Postives = 59/93 (63.44%), Query Frame = 1
Query: 1 YQSSKVLTIAGEGFNPAGTRFRFGNTLVEG-KNYTVS-VASVSATFTLVDGSKWRQNTAALPGPLVLLSADYGDGFVPLGATTAKAGRKVATI 273
YQS+ L + G GFNP GT RF N L G NYT S + T L GS+WR N LPG LVLL+AD GDG+V LGAT AKAGRK+A +
Sbjct: 223 YQSTPTLELDGAGFNPKGTSLRFANALRGGGANYTASAITPTHMTLELAPGSRWRGNADNLPGALVLLAADAGDGYVALGATAAKAGRKIAMV 315
BLAST of mRNA_H-canaliculatus_M_contigs7524.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y596_AURAN) HSP 1 Score: 79.0 bits (193), Expect = 4.680e-15 Identity = 48/105 (45.71%), Postives = 59/105 (56.19%), Query Frame = 1
Query: 1 YQSSKVLTIAGEGF-------NPAGTRFRFGNTLV-EGKNYTVSVASVSAT-FTLVDGSKWRQNTAALPGPLVLLSADYGDGFVPLGATTAKAGRKVATIFADPK 288
YQ++ L I G GF N R R+GN L+ G NYTVS + L GS WR+N A LP PL LL+AD G G V +GAT A+ G +VAT+F PK
Sbjct: 90 YQNAPSLVIKGSGFAHVNEVANFGSPRLRWGNGLLGRGVNYTVSTFDDNKVELVLKPGSVWRRNGANLPAPLTLLAADVGSGLVAMGATEARKGVRVATVFEAPK 194 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7524.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7524.1.1 >prot_H-canaliculatus_M_contigs7524.1.1 ID=prot_H-canaliculatus_M_contigs7524.1.1|Name=mRNA_H-canaliculatus_M_contigs7524.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=97bp YQSSKVLTIAGEGFNPAGTRFRFGNTLVEGKNYTVSVASVSATFTLVDGSback to top mRNA from alignment at H-canaliculatus_M_contigs7524:4784..5264- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7524.1.1 ID=mRNA_H-canaliculatus_M_contigs7524.1.1|Name=mRNA_H-canaliculatus_M_contigs7524.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=481bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7524:4784..5264- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7524:4784..5264- >mRNA_H-canaliculatus_M_contigs7524.1.1 ID=mRNA_H-canaliculatus_M_contigs7524.1.1|Name=mRNA_H-canaliculatus_M_contigs7524.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=291bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7524:4784..5264- (Hapterophycus canaliculatus Oshoro7m male)back to top |