mRNA_H-canaliculatus_M_contigs75203.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs75203.1.1 vs.
Match: Short (chain dehydrogenase n=12 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A1H2Y546_9RHOB) HSP 1 Score: 259 bits (661), Expect = 5.130e-85 Identity = 129/179 (72.07%), Postives = 152/179 (84.92%), Query Frame = 1
Query: 4 QVAFLGRNAERLATVEAEALAAGAPKAAGLLCDMQNIAQITATVARIIADFGGIDILINNAGIWHKAGPLDTIAPDMLEATVQTNLTGLMQITQAALPAIREAEQGAVLNVVSKSGVVAQAGQSVYSATKYGVRGFTDVLKEDEIGNGVRVAGLYQSGTNTGMFAKADEDVPNHIFTEP 540
++A LGR+A+RLA VEAE +AAGA +A G+ CD+QN I+ V ++ A FGG+DILINNAGIWHK GPLD I P +L+ATVQTNLTGLMQITQAA+PA+R ++G +LNVVSKSGVVAQAGQSVY+ATKYGVRGFT+VLK DE GVRV G+YQSGTNTGMF+KA EDVPNHIFTEP
Sbjct: 31 RLAILGRDADRLAAVEAECVAAGASEAIGIACDVQNPDAISGAVEQVTAAFGGLDILINNAGIWHKTGPLDEIPPQLLQATVQTNLTGLMQITQAAIPALRANDEGIILNVVSKSGVVAQAGQSVYTATKYGVRGFTEVLKADEENTGVRVGGVYQSGTNTGMFSKAGEDVPNHIFTEP 209
BLAST of mRNA_H-canaliculatus_M_contigs75203.1.1 vs.
Match: NADP-dependent (3-hydroxy acid dehydrogenase YdfG n=2 Tax=Sulfitobacter TaxID=60136 RepID=A0A1G7Y883_9RHOB) HSP 1 Score: 256 bits (654), Expect = 5.950e-84 Identity = 131/180 (72.78%), Postives = 149/180 (82.78%), Query Frame = 1
Query: 1 AQVAFLGRNAERLATVEAEALAAGAPKAAGLLCDMQNIAQITATVARIIADFGGIDILINNAGIWHKAGPLDTIAPDMLEATVQTNLTGLMQITQAALPAIREAEQGAVLNVVSKSGVVAQAGQSVYSATKYGVRGFTDVLKEDEIGNGVRVAGLYQSGTNTGMFAKADEDVPNHIFTEP 540
A++A LGRNAERL V AGAP+A L CD+Q+ A I+A A ++ FGG+DI+INNAGIWHKAGPLDTIAP+ML+ATVQTNLTGLMQ+TQA LPA+RE ++ VLNVVSKSGVVAQ GQSVY+ATKYGVRGFT+VLK DE GVRV GLYQSGTNT MFAKA EDVPNHIFTEP
Sbjct: 30 ARLAILGRNAERLEAVAQACKEAGAPEALPLTCDLQDPAAISAVTADVLESFGGLDIVINNAGIWHKAGPLDTIAPEMLQATVQTNLTGLMQMTQALLPALRENDESIVLNVVSKSGVVAQVGQSVYTATKYGVRGFTEVLKADEAETGVRVGGLYQSGTNTEMFAKAGEDVPNHIFTEP 209
BLAST of mRNA_H-canaliculatus_M_contigs75203.1.1 vs.
Match: Short (chain dehydrogenase n=11 Tax=Rhodobacterales TaxID=204455 RepID=A9DRR9_9RHOB) HSP 1 Score: 255 bits (651), Expect = 1.700e-83 Identity = 129/180 (71.67%), Postives = 149/180 (82.78%), Query Frame = 1
Query: 1 AQVAFLGRNAERLATVEAEALAAGAPKAAGLLCDMQNIAQITATVARIIADFGGIDILINNAGIWHKAGPLDTIAPDMLEATVQTNLTGLMQITQAALPAIREAEQGAVLNVVSKSGVVAQAGQSVYSATKYGVRGFTDVLKEDEIGNGVRVAGLYQSGTNTGMFAKADEDVPNHIFTEP 540
A++A LGR+ RL V AAGA +A GL CD+Q+ I T A+++ FGG+DILINNAGIWHKAGPLDTIAP+ML+ATVQTNLTGLMQ+TQA LPA+R+ ++ +LNVVSKSGVVAQAGQSVY+ATKYGVRGFT+VLK DE GVRV GLYQSGTNTGMFAKA EDVPNHIFTEP
Sbjct: 30 ARLAILGRDGTRLQAVAEACKAAGASEAIGLTCDLQDPLAIDQTAAQVVERFGGLDILINNAGIWHKAGPLDTIAPEMLQATVQTNLTGLMQMTQATLPALRDNDEAIILNVVSKSGVVAQAGQSVYTATKYGVRGFTEVLKADEENTGVRVGGLYQSGTNTGMFAKAGEDVPNHIFTEP 209
BLAST of mRNA_H-canaliculatus_M_contigs75203.1.1 vs.
Match: 3-ketoacyl-(Acyl-carrier-protein) (reductase n=1 Tax=Roseobacter sp. SK209-2-6 TaxID=388739 RepID=A4ET39_9RHOB) HSP 1 Score: 246 bits (628), Expect = 5.330e-80 Identity = 126/178 (70.79%), Postives = 144/178 (80.90%), Query Frame = 1
Query: 7 VAFLGRNAERLATVEAEALAAGAPKAAGLLCDMQNIAQITATVARIIADFGGIDILINNAGIWHKAGPLDTIAPDMLEATVQTNLTGLMQITQAALPAIREAEQGAVLNVVSKSGVVAQAGQSVYSATKYGVRGFTDVLKEDEIGNGVRVAGLYQSGTNTGMFAKADEDVPNHIFTEP 540
+A LGRN RL+ V EA GA KA G DM + A + + VA I ADF G+DIL+NNAGIWHKAGPLDTI+ +ML ATVQTNLTGLMQ+T+A LP +R ++ A+LNV SKSGVVAQAGQSVY+ATKYGVRGFTDVLKEDE +GVRVAGLYQSGTNTGMF KA E+VPNHIFTEP
Sbjct: 32 LAILGRNEARLSAVAVEARTLGAAKARGYSADMTDAAALQSVVAEIEADFDGVDILVNNAGIWHKAGPLDTISDEMLIATVQTNLTGLMQLTKAVLPRLRSRDEAAILNVSSKSGVVAQAGQSVYTATKYGVRGFTDVLKEDEAESGVRVAGLYQSGTNTGMFVKAGEEVPNHIFTEP 209
BLAST of mRNA_H-canaliculatus_M_contigs75203.1.1 vs.
Match: Oxidoreductase (n=6 Tax=Sulfitobacter mediterraneus TaxID=83219 RepID=A0A061SST1_9RHOB) HSP 1 Score: 244 bits (624), Expect = 2.160e-79 Identity = 123/180 (68.33%), Postives = 147/180 (81.67%), Query Frame = 1
Query: 1 AQVAFLGRNAERLATVEAEALAAGAPKAAGLLCDMQNIAQITATVARIIADFGGIDILINNAGIWHKAGPLDTIAPDMLEATVQTNLTGLMQITQAALPAIREAEQGAVLNVVSKSGVVAQAGQSVYSATKYGVRGFTDVLKEDEIGNGVRVAGLYQSGTNTGMFAKADEDVPNHIFTEP 540
A++A LGRN +RL V AEAL AGAP A G +CD+ + AQI I+ DFG IDILINNAGIWHKAGPLD+I P M+EAT+ TNL+G + +T+A LP +R ++ A+LNVVSKSGV+AQAGQSVY+A+KYG+RGFTDVLK+DE +GVRVAGLYQSGTNTGMF KA EDVPNHIFTEP
Sbjct: 30 ARIAALGRNKDRLDAVAAEALQAGAPAAQGFVCDLTHKAQIDTAATAILDDFGPIDILINNAGIWHKAGPLDSIDPAMIEATLATNLSGAIHLTRALLPGLRSRKEAAILNVVSKSGVLAQAGQSVYTASKYGMRGFTDVLKDDEAESGVRVAGLYQSGTNTGMFDKAGEDVPNHIFTEP 209
BLAST of mRNA_H-canaliculatus_M_contigs75203.1.1 vs.
Match: Short (chain dehydrogenase n=1 Tax=Epibacterium ulvae TaxID=1156985 RepID=A0A1G5PXU5_9RHOB) HSP 1 Score: 244 bits (623), Expect = 3.060e-79 Identity = 128/179 (71.51%), Postives = 142/179 (79.33%), Query Frame = 1
Query: 4 QVAFLGRNAERLATVEAEALAAGAPKAAGLLCDMQNIAQITATVARIIADFGGIDILINNAGIWHKAGPLDTIAPDMLEATVQTNLTGLMQITQAALPAIREAEQGAVLNVVSKSGVVAQAGQSVYSATKYGVRGFTDVLKEDEIGNGVRVAGLYQSGTNTGMFAKADEDVPNHIFTEP 540
++A LGRN RL TV AE LA GA +A D+ + A I +I+ADFGG DILINNAGIWHKAGPLD+I DML TVQTNLT LMQ+T+ LPA+R ++ AVLNV SKSGVVAQAGQSVYSATKYGVRGFTDVLKEDE GVRVAGLYQSGTNTGMFAKA E+VPNHIFTEP
Sbjct: 31 RIAVLGRNQTRLDTVVAETLALGAAEARAYAVDLMDPAAIETGAQQILADFGGADILINNAGIWHKAGPLDSIDADMLVTTVQTNLTALMQLTRHVLPALRTRDEAAVLNVASKSGVVAQAGQSVYSATKYGVRGFTDVLKEDEAETGVRVAGLYQSGTNTGMFAKASEEVPNHIFTEP 209
BLAST of mRNA_H-canaliculatus_M_contigs75203.1.1 vs.
Match: SDR (family oxidoreductase n=1 Tax=Parasedimentitalea marina TaxID=2483033 RepID=A0A3T0N7A9_9RHOB) HSP 1 Score: 243 bits (620), Expect = 8.750e-79 Identity = 124/179 (69.27%), Postives = 143/179 (79.89%), Query Frame = 1
Query: 4 QVAFLGRNAERLATVEAEALAAGAPKAAGLLCDMQNIAQITATVARIIADFGGIDILINNAGIWHKAGPLDTIAPDMLEATVQTNLTGLMQITQAALPAIREAEQGAVLNVVSKSGVVAQAGQSVYSATKYGVRGFTDVLKEDEIGNGVRVAGLYQSGTNTGMFAKADEDVPNHIFTEP 540
++A LGRN+ RL V AEA+ GA +A G D + A + +T I ADFGG+DIL+NNAGIWHKAGPLDTI D+L ATVQTNLT LMQ+T+ LPA+R ++ +LNV SKSGVVAQAGQSVYSATKYGVRGFT+VLKEDE GVRVAGLYQSGTNTGMFAKA E+VPNHIFTEP
Sbjct: 31 KLAILGRNSARLEAVVAEAMTLGAAEARGYAVDFMDSAALDSTAQAIQADFGGVDILVNNAGIWHKAGPLDTIDADLLVATVQTNLTALMQLTRHVLPALRNQDEAIILNVASKSGVVAQAGQSVYSATKYGVRGFTEVLKEDEAETGVRVAGLYQSGTNTGMFAKAGEEVPNHIFTEP 209
BLAST of mRNA_H-canaliculatus_M_contigs75203.1.1 vs.
Match: SDR (family oxidoreductase n=1 Tax=Pseudophaeobacter sp. EL27 TaxID=2107580 RepID=UPI000EFACD59) HSP 1 Score: 242 bits (617), Expect = 2.500e-78 Identity = 125/179 (69.83%), Postives = 145/179 (81.01%), Query Frame = 1
Query: 4 QVAFLGRNAERLATVEAEALAAGAPKAAGLLCDMQNIAQITATVARIIADFGGIDILINNAGIWHKAGPLDTIAPDMLEATVQTNLTGLMQITQAALPAIREAEQGAVLNVVSKSGVVAQAGQSVYSATKYGVRGFTDVLKEDEIGNGVRVAGLYQSGTNTGMFAKADEDVPNHIFTEP 540
++A LGR+ RL V A++ GA +A D+ + I A A+I+ADFGGIDILINNAGIWHKAGPLDTI P +L TVQTNLTGLMQ+TQA LP++R AE+ A+LNVVSKSGVVAQAGQSVY+ATKYGVRGF+DVLK+DE GVRVA LYQSGTNTGMFAKA E+VPNHIFTEP
Sbjct: 31 RLAILGRDEARLNLVCKAAVSEGATEARSYAMDLMDAQTIAAIAAQILADFGGIDILINNAGIWHKAGPLDTIPPALLSETVQTNLTGLMQLTQAFLPSLRTAEEAAILNVVSKSGVVAQAGQSVYTATKYGVRGFSDVLKQDEAETGVRVAALYQSGTNTGMFAKAGEEVPNHIFTEP 209
BLAST of mRNA_H-canaliculatus_M_contigs75203.1.1 vs.
Match: SDR (family oxidoreductase n=1 Tax=unclassified Roseobacter TaxID=196798 RepID=UPI0014915FD9) HSP 1 Score: 242 bits (617), Expect = 2.500e-78 Identity = 124/179 (69.27%), Postives = 145/179 (81.01%), Query Frame = 1
Query: 4 QVAFLGRNAERLATVEAEALAAGAPKAAGLLCDMQNIAQITATVARIIADFGGIDILINNAGIWHKAGPLDTIAPDMLEATVQTNLTGLMQITQAALPAIREAEQGAVLNVVSKSGVVAQAGQSVYSATKYGVRGFTDVLKEDEIGNGVRVAGLYQSGTNTGMFAKADEDVPNHIFTEP 540
++A LGRNAERL V AEA+AAGA +A D+ + A + AT I+ADF +DILINNAGIWHKAGPLD+I+PD+L ATVQTNLT LMQ+T+ LP +R ++ A+LN+ SKSGV+AQAGQSVYSATKYGVRGFTDVLKEDE GVRVAGLYQSGTNT MFAKA E+VPN IFTEP
Sbjct: 31 RLAILGRNAERLDRVVAEAIAAGAKEARAYAFDLTDSAALDATATTILADFDAVDILINNAGIWHKAGPLDSISPDLLVATVQTNLTALMQLTRHILPHLRARDEAAILNIASKSGVIAQAGQSVYSATKYGVRGFTDVLKEDEAETGVRVAGLYQSGTNTQMFAKAGEEVPNQIFTEP 209
BLAST of mRNA_H-canaliculatus_M_contigs75203.1.1 vs.
Match: 3-oxoacyl-[acyl-carrier-protein] (reductase FabG n=4 Tax=Phaeobacter italicus TaxID=481446 RepID=A0A0H5DJ53_9RHOB) HSP 1 Score: 241 bits (616), Expect = 3.550e-78 Identity = 125/178 (70.22%), Postives = 140/178 (78.65%), Query Frame = 1
Query: 7 VAFLGRNAERLATVEAEALAAGAPKAAGLLCDMQNIAQITATVARIIADFGGIDILINNAGIWHKAGPLDTIAPDMLEATVQTNLTGLMQITQAALPAIREAEQGAVLNVVSKSGVVAQAGQSVYSATKYGVRGFTDVLKEDEIGNGVRVAGLYQSGTNTGMFAKADEDVPNHIFTEP 540
+A +GRN RL V AE A GA +A D+ + A I A ++ DFGG+DILINNAGIWHKAGPLD+I DML ATVQTNLT LMQ+T+ LP +R+ E+ A+LNV SKSGVVAQAGQSVYSATKYGVRGFTDVLK DE GVRVAGLYQSGTNTGMFAKADEDVPNHIFTEP
Sbjct: 32 IAIVGRNQARLDAVVAECKARGAAEARAYAADLTDAAAIEQAAAAMLDDFGGMDILINNAGIWHKAGPLDSIDADMLVATVQTNLTALMQLTRHVLPVLRQQEEAAILNVASKSGVVAQAGQSVYSATKYGVRGFTDVLKVDEAETGVRVAGLYQSGTNTGMFAKADEDVPNHIFTEP 209 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs75203.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs75203.1.1 >prot_H-canaliculatus_M_contigs75203.1.1 ID=prot_H-canaliculatus_M_contigs75203.1.1|Name=mRNA_H-canaliculatus_M_contigs75203.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=180bp AQVAFLGRNAERLATVEAEALAAGAPKAAGLLCDMQNIAQITATVARIIAback to top mRNA from alignment at H-canaliculatus_M_contigs75203:3..542+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs75203.1.1 ID=mRNA_H-canaliculatus_M_contigs75203.1.1|Name=mRNA_H-canaliculatus_M_contigs75203.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=540bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75203:3..542+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs75203:3..542+ >mRNA_H-canaliculatus_M_contigs75203.1.1 ID=mRNA_H-canaliculatus_M_contigs75203.1.1|Name=mRNA_H-canaliculatus_M_contigs75203.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=540bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75203:3..542+ (Hapterophycus canaliculatus Oshoro7m male)back to top |