mRNA_H-canaliculatus_M_contigs75193.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs75193.1.1 vs.
Match: Xaa-Pro (peptidase family protein n=1 Tax=Planktotalea arctica TaxID=1481893 RepID=UPI000A1771A9) HSP 1 Score: 282 bits (722), Expect = 1.640e-92 Identity = 142/180 (78.89%), Postives = 156/180 (86.67%), Query Frame = 1
Query: 1 LSADTAMQCAWAAMRVGMTEADVASIIRESFKSQGATPLFTIIGAGGNGAFPHHHTGNTHLKSGDIVVMDIGGGMDGYSSDMTRMASMGPASSEYHRIHAIVESAVQAAMTAARPGVKAHVVDDAARQVITEAGFGEYFVHRTGHGMGIEVHETPYITSSSQTVLDEGMVFSIEPGIYLP 540
LSADTAM+ AWAAM+VGMTE DVA ++R SFK QGATPLF I+GAGGNGAFPHH TG T LK GD VVMDIGG M+GYSSDMTRMA MG A Y +H IVE AVQAAM AARPGV+AHVVDDAAR VI++AG+G YFVHRTGHGMGIEVHETPYIT++SQTVL+EGMVFSIEPGIYLP
Sbjct: 149 LSADTAMRAAWAAMKVGMTENDVADVVRASFKEQGATPLFYIVGAGGNGAFPHHQTGGTVLKPGDAVVMDIGGAMNGYSSDMTRMAVMGDAPEGYREVHDIVERAVQAAMEAARPGVRAHVVDDAARAVISDAGYGAYFVHRTGHGMGIEVHETPYITAASQTVLEEGMVFSIEPGIYLP 328
BLAST of mRNA_H-canaliculatus_M_contigs75193.1.1 vs.
Match: Aminopeptidase (YpdF n=2 Tax=unclassified Rhodobacteraceae TaxID=58840 RepID=B6ATJ4_9RHOB) HSP 1 Score: 281 bits (720), Expect = 2.420e-92 Identity = 140/180 (77.78%), Postives = 155/180 (86.11%), Query Frame = 1
Query: 1 LSADTAMQCAWAAMRVGMTEADVASIIRESFKSQGATPLFTIIGAGGNGAFPHHHTGNTHLKSGDIVVMDIGGGMDGYSSDMTRMASMGPASSEYHRIHAIVESAVQAAMTAARPGVKAHVVDDAARQVITEAGFGEYFVHRTGHGMGIEVHETPYITSSSQTVLDEGMVFSIEPGIYLP 540
+SADTAMQ AWAAM++GM+E VA II +SF SQ PLF I+GAGGNGAFPHHHTG T LK GD VVMDIGGG DGYSSDMTRMA MG Y IHAIVE+AVQAAM AARPGVKAHVVDDAAR VIT+AG+G+YF+HRTGHGMG+E+HETPYIT+SSQTVL+EGMVFSIEPGIYLP
Sbjct: 139 VSADTAMQAAWAAMKIGMSETQVADIIHDSFASQEVKPLFAIVGAGGNGAFPHHHTGETTLKGGDAVVMDIGGGKDGYSSDMTRMAVMGTPPEGYLEIHAIVEAAVQAAMAAARPGVKAHVVDDAARGVITDAGYGDYFMHRTGHGMGVEIHETPYITASSQTVLEEGMVFSIEPGIYLP 318
BLAST of mRNA_H-canaliculatus_M_contigs75193.1.1 vs.
Match: M24 (family metallopeptidase n=1 Tax=Ruegeria sp. HKCCD7255 TaxID=2683004 RepID=UPI001489B0D3) HSP 1 Score: 271 bits (693), Expect = 3.930e-88 Identity = 137/178 (76.97%), Postives = 151/178 (84.83%), Query Frame = 1
Query: 7 ADTAMQCAWAAMRVGMTEADVASIIRESFKSQGATPLFTIIGAGGNGAFPHHHTGNTHLKSGDIVVMDIGGGMDGYSSDMTRMASMGPASSEYHRIHAIVESAVQAAMTAARPGVKAHVVDDAARQVITEAGFGEYFVHRTGHGMGIEVHETPYITSSSQTVLDEGMVFSIEPGIYLP 540
ADTAM AWAAM+ GMTE VA +IR +F QGA PLFTIIGAG NGAFPHHHTG+T L+ GD VVMDIG GMD YSSD+TRMA +G A Y IHAIV +AV+AA+ AARPGVKAHVVDDAAR VITEAG+GEYFVHRTGHGMG+EVHE PYIT++SQTVLDEGMVFSIEPGIYLP
Sbjct: 151 ADTAMMAAWAAMKPGMTERAVAEVIRANFAKQGAKPLFTIIGAGRNGAFPHHHTGDTVLQRGDAVVMDIGAGMDSYSSDITRMALIGEAPEGYAEIHAIVNAAVEAALAAARPGVKAHVVDDAARNVITEAGYGEYFVHRTGHGMGVEVHEPPYITAASQTVLDEGMVFSIEPGIYLP 328
BLAST of mRNA_H-canaliculatus_M_contigs75193.1.1 vs.
Match: Peptidase (M24 n=1 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A3C0PQ70_9RHOB) HSP 1 Score: 268 bits (686), Expect = 4.650e-87 Identity = 132/179 (73.74%), Postives = 151/179 (84.36%), Query Frame = 1
Query: 4 SADTAMQCAWAAMRVGMTEADVASIIRESFKSQGATPLFTIIGAGGNGAFPHHHTGNTHLKSGDIVVMDIGGGMDGYSSDMTRMASMGPASSEYHRIHAIVESAVQAAMTAARPGVKAHVVDDAARQVITEAGFGEYFVHRTGHGMGIEVHETPYITSSSQTVLDEGMVFSIEPGIYLP 540
+AD AM+ AW AMRVGM+E DVA ++R +FK QGATPLF I+GAG NGAFPHHHTG T +K+GD VVMDIGG M+GYSSDMTRMA MG Y +H IVE AVQA + AA+PGV+AHVVDDAAR +I AG+GEYF+HRTGHGMGIEVHETPYIT+SSQTVL+EGMVFSIEPGIYLP
Sbjct: 150 TADFAMKAAWDAMRVGMSENDVAGVVRSAFKEQGATPLFYIVGAGANGAFPHHHTGETVIKTGDAVVMDIGGAMEGYSSDMTRMAVMGIVPEGYQAVHEIVERAVQAGIAAAKPGVRAHVVDDAARGIIAAAGYGEYFLHRTGHGMGIEVHETPYITASSQTVLEEGMVFSIEPGIYLP 328
BLAST of mRNA_H-canaliculatus_M_contigs75193.1.1 vs.
Match: M24 (family metallopeptidase n=1 Tax=Sulfitobacter sp. TaxID=1903071 RepID=A0A7Y2CZX3_9RHOB) HSP 1 Score: 268 bits (685), Expect = 6.800e-87 Identity = 131/179 (73.18%), Postives = 150/179 (83.80%), Query Frame = 1
Query: 4 SADTAMQCAWAAMRVGMTEADVASIIRESFKSQGATPLFTIIGAGGNGAFPHHHTGNTHLKSGDIVVMDIGGGMDGYSSDMTRMASMGPASSEYHRIHAIVESAVQAAMTAARPGVKAHVVDDAARQVITEAGFGEYFVHRTGHGMGIEVHETPYITSSSQTVLDEGMVFSIEPGIYLP 540
+AD AMQ AWA M GMTE VA I+R +FK QG P+FTIIGAGGNGA+PHH TG T LK GD +VMDIGGGMDGYSSDMTRMA +G +Y +H +VE AVQAA+ AA+PGVKAHVVDDAAR VIT+AG+GEYFVHRTGHGMG+EVHE PYIT++S+TVL+EGMVFSIEPGIYLP
Sbjct: 151 TADQAMQAAWAEMAPGMTETQVADIVRNAFKRQGVKPMFTIIGAGGNGAYPHHQTGETVLKRGDAIVMDIGGGMDGYSSDMTRMAVIGTPPEDYDVVHQVVEGAVQAALAAAKPGVKAHVVDDAARGVITDAGYGEYFVHRTGHGMGVEVHEPPYITATSETVLEEGMVFSIEPGIYLP 329
BLAST of mRNA_H-canaliculatus_M_contigs75193.1.1 vs.
Match: Peptidase (M24 n=1 Tax=Pararhodobacter oceanensis TaxID=2172121 RepID=A0A2T8HQU2_9RHOB) HSP 1 Score: 267 bits (683), Expect = 1.500e-86 Identity = 135/178 (75.84%), Postives = 148/178 (83.15%), Query Frame = 1
Query: 7 ADTAMQCAWAAMRVGMTEADVASIIRESFKSQGATPLFTIIGAGGNGAFPHHHTGNTHLKSGDIVVMDIGGGMDGYSSDMTRMASMGPASSEYHRIHAIVESAVQAAMTAARPGVKAHVVDDAARQVITEAGFGEYFVHRTGHGMGIEVHETPYITSSSQTVLDEGMVFSIEPGIYLP 540
ADTAM+ AWAAMR GMTE +VA+IIR SF GA PLF I+GAG NGAFPHHHTG T LKSGD VVMDIG +GYSSD+TRMA +G Y +HA+VE AVQAA+ AARPGVKAH VDDAAR VITEAG+GEYFVHRTGHGMG+EVHE PYIT+SSQTVL EGMVFSIEPGIYLP
Sbjct: 155 ADTAMRAAWAAMRPGMTETEVATIIRSSFAGSGAKPLFNIVGAGPNGAFPHHHTGETVLKSGDAVVMDIGAASEGYSSDITRMALIGDGPEGYAEVHAVVERAVQAALKAARPGVKAHEVDDAARGVITEAGYGEYFVHRTGHGMGVEVHEPPYITASSQTVLQEGMVFSIEPGIYLP 332
BLAST of mRNA_H-canaliculatus_M_contigs75193.1.1 vs.
Match: M24 (family metallopeptidase n=1 Tax=Sulfitobacter sediminilitoris TaxID=2698830 RepID=A0A6P0CE05_9RHOB) HSP 1 Score: 263 bits (672), Expect = 6.120e-85 Identity = 129/180 (71.67%), Postives = 149/180 (82.78%), Query Frame = 1
Query: 1 LSADTAMQCAWAAMRVGMTEADVASIIRESFKSQGATPLFTIIGAGGNGAFPHHHTGNTHLKSGDIVVMDIGGGMDGYSSDMTRMASMGPASSEYHRIHAIVESAVQAAMTAARPGVKAHVVDDAARQVITEAGFGEYFVHRTGHGMGIEVHETPYITSSSQTVLDEGMVFSIEPGIYLP 540
L D AM+ AW+ MRVGMTE DVA+I+R+SFK+QGA P+F+I+GA GNGAFPHH TG T LKSGD VVMDIGGG+ GY SDMTRMA MG Y IHA+VE+AVQAA+ A+PG KAH VDDAAR VI EAG+G YF+HRTGHG+G+E+HE PYIT+SSQ VLDEGMVFSIEPGIYLP
Sbjct: 149 LVGDAAMRKAWSEMRVGMTERDVAAIVRDSFKAQGAVPMFSIVGAAGNGAFPHHQTGETVLKSGDAVVMDIGGGLGGYPSDMTRMAVMGEQPEGYEEIHAVVEAAVQAALAVAKPGAKAHEVDDAARGVIAEAGYGAYFMHRTGHGLGVEIHEPPYITASSQEVLDEGMVFSIEPGIYLP 328
BLAST of mRNA_H-canaliculatus_M_contigs75193.1.1 vs.
Match: Aminopeptidase (P family protein n=1 Tax=Qingshengfaniella alkalisoli TaxID=2599296 RepID=A0A5B8IXK5_9RHOB) HSP 1 Score: 263 bits (671), Expect = 8.660e-85 Identity = 134/182 (73.63%), Postives = 150/182 (82.42%), Query Frame = 1
Query: 1 LSADTAMQCAWAAMRVGMTEADVASIIRESFKSQGATPLFTIIGAGGNGAFPHHHTGNTHLKSGDIVVMDIGGGMDGYS--SDMTRMASMGPASSEYHRIHAIVESAVQAAMTAARPGVKAHVVDDAARQVITEAGFGEYFVHRTGHGMGIEVHETPYITSSSQTVLDEGMVFSIEPGIYLP 540
L AD AM+ WAAM+ GMTE +VA IIR F +QGA PLF+I+G GGNGAFPHH TG+T LK GD VVMDIGGGMD YS SDMTRMA +G Y +HAIVE+AVQAAM AARPGVKAH VDDAAR VITEAG+GEYFVHRTGHGMG+EVHE PY+TS SQT+L+EGMVFSIEPGIY+P
Sbjct: 149 LIADKAMRAGWAAMKPGMTELEVAQIIRAEFTAQGAKPLFSIVGTGGNGAFPHHQTGDTVLKDGDSVVMDIGGGMDSYSYSSDMTRMAVLGTPPVGYEEVHAIVEAAVQAAMKAARPGVKAHEVDDAARGVITEAGYGEYFVHRTGHGMGVEVHEQPYLTSVSQTILEEGMVFSIEPGIYIP 330
BLAST of mRNA_H-canaliculatus_M_contigs75193.1.1 vs.
Match: M24 (family metallopeptidase (Fragment) n=1 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A520ZJC4_9RHOB) HSP 1 Score: 256 bits (654), Expect = 2.670e-83 Identity = 128/178 (71.91%), Postives = 144/178 (80.90%), Query Frame = 1
Query: 7 ADTAMQCAWAAMRVGMTEADVASIIRESFKSQGATPLFTIIGAGGNGAFPHHHTGNTHLKSGDIVVMDIGGGMDGYSSDMTRMASMGPASSEYHRIHAIVESAVQAAMTAARPGVKAHVVDDAARQVITEAGFGEYFVHRTGHGMGIEVHETPYITSSSQTVLDEGMVFSIEPGIYLP 540
AD AMQ AWAAMR GMTE +VA ++ ESF + GA PLF IIG GGNGA+PHHHTG T L GD VVMDIG G DG+SSD+TRMA +G Y IHAIVE AVQAAM AARPG KAH VDDAAR VITEAG+G+YFVHRTGHGMG+EVHE P+IT++SQT L+ GMVFSIEPG+YLP
Sbjct: 71 ADRAMQAAWAAMRPGMTETEVADVVAESFAAAGAAPLFRIIGTGGNGAYPHHHTGRTKLAMGDAVVMDIGAGKDGFSSDITRMAVIGAPPEGYAEIHAIVERAVQAAMAAARPGAKAHEVDDAARGVITEAGYGDYFVHRTGHGMGVEVHEPPWITATSQTPLEVGMVFSIEPGVYLP 248
BLAST of mRNA_H-canaliculatus_M_contigs75193.1.1 vs.
Match: Aminopeptidase (P family protein n=2 Tax=Rhodophyticola porphyridii TaxID=1852017 RepID=A0A3L9Y1E3_9RHOB) HSP 1 Score: 258 bits (658), Expect = 8.020e-83 Identity = 129/179 (72.07%), Postives = 147/179 (82.12%), Query Frame = 1
Query: 4 SADTAMQCAWAAMRVGMTEADVASIIRESFKSQGATPLFTIIGAGGNGAFPHHHTGNTHLKSGDIVVMDIGGGMDGYSSDMTRMASMGPASSEYHRIHAIVESAVQAAMTAARPGVKAHVVDDAARQVITEAGFGEYFVHRTGHGMGIEVHETPYITSSSQTVLDEGMVFSIEPGIYLP 540
SAD AM+ AWAAMR GMTEA+VA + RESF SQGA PLFTIIGAG NGAFPHHHTG T L G VVMDIG GM GYSSD+TRMA +G A Y R+H IV++AV+AA+ AARPGV A VD AAR VI EAG+G+YF+HRTGHGMG+EVHE PY+T +S+T+LDEGMVFSIEPGIYLP
Sbjct: 150 SADAAMKAAWAAMRPGMTEAEVAEVARESFLSQGAKPLFTIIGAGPNGAFPHHHTGQTRLAGGQAVVMDIGAGMAGYSSDITRMAILGQAPEGYDRVHDIVDAAVEAALAAARPGVPAKAVDAAARGVIAEAGYGDYFLHRTGHGMGVEVHEPPYLTGASETLLDEGMVFSIEPGIYLP 328 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs75193.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs75193.1.1 >prot_H-canaliculatus_M_contigs75193.1.1 ID=prot_H-canaliculatus_M_contigs75193.1.1|Name=mRNA_H-canaliculatus_M_contigs75193.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=174bp MQCAWAAMRVGMTEADVASIIRESFKSQGATPLFTIIGAGGNGAFPHHHTback to top mRNA from alignment at H-canaliculatus_M_contigs75193:3..542+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs75193.1.1 ID=mRNA_H-canaliculatus_M_contigs75193.1.1|Name=mRNA_H-canaliculatus_M_contigs75193.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=540bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75193:3..542+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs75193:3..542+ >mRNA_H-canaliculatus_M_contigs75193.1.1 ID=mRNA_H-canaliculatus_M_contigs75193.1.1|Name=mRNA_H-canaliculatus_M_contigs75193.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=522bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75193:3..542+ (Hapterophycus canaliculatus Oshoro7m male)back to top |