mRNA_H-canaliculatus_M_contigs75154.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs75154.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE) HSP 1 Score: 127 bits (319), Expect = 1.940e-31 Identity = 68/136 (50.00%), Postives = 87/136 (63.97%), Query Frame = 1
Query: 1 MFIDPAEERVERERALDDSVEKAVQNGLSTDGACRLRDILGRRVNDFQRALHGDPPARMEPMRVQLKPHAKAVKGKPRRYNPVKTGWLASCIAAVVAFGLLVHNIQAVWASPAMAVPKRDA----FRLVSDYQAVN 396
M + PAEE R ALD +V+ A GLS G RLR ++ RR N F+R + GDPPA + PM V+LK AK VK + R YNP KT WL +C+AA+VA GL+ N+QA+WAS M PKR +R V D++AVN
Sbjct: 587 MVMTPAEEEAGRADALDRAVDSAADAGLSPWGLDRLRQVVDRRFNVFRRGVRGDPPANVPPMTVKLKTGAKPVKARLRTYNPDKTKWLTTCLAALVALGLVYVNLQAIWASAIMLTPKRSGDKVTYRFVGDFRAVN 722
BLAST of mRNA_H-canaliculatus_M_contigs75154.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE) HSP 1 Score: 122 bits (307), Expect = 8.050e-30 Identity = 67/133 (50.38%), Postives = 83/133 (62.41%), Query Frame = 1
Query: 1 MFIDPAEERVERERALDDSVEKAVQNGLSTDGACRLRDILGRRVNDFQRAL-HGDPPARMEPMRVQLKPHAKAVKGKPRRYNPVKTGWLASCIAAVVAFGLLVHNIQAVWASPAMAVPKRDAFRLVSDYQAVN 396
M + P EE R +LD +V A GL RLR I+ R N F+R L HGDPPA +EP+RV LKP A+ VK +PR YNP+KT WLA GL+ N+QAVWAS AMA PK+ +RLVSD++A N
Sbjct: 695 MDMSPEEEASARSASLDSAVSSAAAAGLEEPHVGRLRGIISERWNAFRRGLRHGDPPANVEPLRVTLKPGARPVKARPRVYNPIKTAWLAG-------LGLVFLNMQAVWASAAMATPKKGGYRLVSDFRAAN 820
BLAST of mRNA_H-canaliculatus_M_contigs75154.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK9_9PHAE) HSP 1 Score: 122 bits (305), Expect = 1.380e-29 Identity = 65/132 (49.24%), Postives = 85/132 (64.39%), Query Frame = 1
Query: 7 IDPAEERVERERALDDSVEKAVQNGLSTDGACRLRDILGRRVNDFQRALH-GDPPARMEPMRVQLKPHAKAVKGKPRRYNPVKTGWLASCIAAVVAFGLLVHNIQAVWASPAMAVPKRDAFRLVSDYQAVNS 399
+ P EE R +LD +V AV GL RLR I+ R N F+ + GDPPA +EP+RV LKP A VK +PR YNP+KT WLA C+A+ V GL+ N+QAV AS AMA PK+ +RL+SD++A N+
Sbjct: 471 MSPEEEASARSASLDSAVSSAVVAGLDEPHVGRLRSIIRERWNAFRPGMRPGDPPANVEPLRVTLKPGALPVKARPRTYNPIKTAWLAGCMASPVVLGLVFLNMQAVSASAAMATPKKGGYRLLSDFRAANN 602
BLAST of mRNA_H-canaliculatus_M_contigs75154.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XQJ2_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 3.800e-15 Identity = 48/133 (36.09%), Postives = 74/133 (55.64%), Query Frame = 1
Query: 19 EERVERERA----LDDSVEKAVQNGLSTDGACRLRDILGRRVNDFQRALHGDPPARMEPMRVQLKPHAKAVKGKPRRYNPVKTGWLASCIAAVVAFGLLVHNIQAVWASPAMAVPKRDA--FRLVSDYQAVNS 399
E R ++E A L V A GL+ + RL +L R V+ F+ L DPP ++EP++V++KP +K VK RRY P ++ +AA+ A G++ N +A WA+ VPKRDA R+ D + +N+
Sbjct: 359 ERRKKKEEAVLGILMSKVADAQARGLTAEETARLESLLSRHVDVFREDLGNDPPVKVEPLKVRVKPDSKPVKCAMRRYPPAHLEYMREHVAALEANGMVYKNNRATWAAAPRIVPKRDAGALRMTIDSRPINA 491
BLAST of mRNA_H-canaliculatus_M_contigs75154.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WYH1_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 7.810e-15 Identity = 45/120 (37.50%), Postives = 67/120 (55.83%), Query Frame = 1
Query: 46 LDDSVEKAVQNGLSTDGACRLRDILGRRVNDFQRALHGDPPARMEPMRVQLKPHAKAVKGKPRRYNPVKTGWLASCIAAVVAFGLLVHNIQAVWASPAMAVPKRDA--FRLVSDYQAVNS 399
LD + V NGL+ A RLR++L R + F+ + GDPP ++EP++V+LKP + VK RRY P +L + + GL+ N +A WAS VPK+D R+ D Q +N+
Sbjct: 32 LDKVHDAEVHNGLTNQDAGRLREMLLRYADVFREDVEGDPPVKVEPIKVRLKPGSVPVKCSMRRYPPAHMDFLKRHVEQLERAGLVYKNNRATWASAPRIVPKKDPGDLRMTIDSQPINA 151
BLAST of mRNA_H-canaliculatus_M_contigs75154.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0M9I6_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 1.160e-14 Identity = 46/119 (38.66%), Postives = 67/119 (56.30%), Query Frame = 1
Query: 43 ALDDSVEKAVQNGLSTDGACRLRDILGRRVNDFQRALHGDPPARMEPMRVQLKPHAKAVKGKPRRYNPVKTGWLASCIAAVVAFGLLVHNIQAVWASPAMAVPKRDA-FRLVSDYQAVN 396
A++ +E AVQ G + RLR I R + ++ L DPPAR+ PM+++LKP AK + KPR+Y P +L A +V G + N ++ WA PA+ V K FR +DY+ VN
Sbjct: 47 AVEKMIESAVQKGFPKESVPRLRRIATR-YDIWRLRLGDDPPARVPPMKIRLKPGAKPYRCKPRKYPPEVRRFLDDFNAELVRLGWVYENTESRWACPALPVRKTGGEFRQTADYKPVN 164
BLAST of mRNA_H-canaliculatus_M_contigs75154.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WKQ3_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 1.690e-14 Identity = 41/109 (37.61%), Postives = 65/109 (59.63%), Query Frame = 1
Query: 79 GLSTDGACRLRDILGRRVNDFQRALHGDPPARMEPMRVQLKPHAKAVKGKPRRYNPVKTGWLASCIAAVVAFGLLVHNIQAVWASPAMAVPKRDA--FRLVSDYQAVNS 399
GL+ + A RL +L R V+ F+ L DPP ++EP++V++KP +K VK RRY P ++ +AA+ A G++ N +A WA+ PKRDA R+ D + +N+
Sbjct: 358 GLTAEEAARLESLLSRHVDVFREDLGNDPPVKVEPLKVRVKPDSKPVKCGMRRYPPAHLEYMREHVAALEANGMVYKNNRATWAAAPRIFPKRDAGALRMTIDSRPINA 466
BLAST of mRNA_H-canaliculatus_M_contigs75154.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XUC8_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 1.690e-14 Identity = 43/116 (37.07%), Postives = 67/116 (57.76%), Query Frame = 1
Query: 58 VEKAVQNGLSTDGACRLRDILGRRVNDFQRALHGDPPARMEPMRVQLKPHAKAVKGKPRRYNPVKTGWLASCIAAVVAFGLLVHNIQAVWASPAMAVPKRDA--FRLVSDYQAVNS 399
V A GL+ + RL +L R V+ F+ L DPP ++EP++V++KP +K VK RRY P ++ +AA+ A G++ N +A WA+ VPKRDA R+ D + +N+
Sbjct: 207 VADAQARGLTAEEPARLESLLSRHVDVFRDDLGNDPPVKVEPLKVRVKPDSKPVKCGMRRYPPAHLEYMREHVAALEANGMVYKNNRATWAAAPRIVPKRDAGVLRMTIDSRPINA 322
BLAST of mRNA_H-canaliculatus_M_contigs75154.1.1 vs.
Match: Reverse (transcriptase domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ADY1_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 4.570e-14 Identity = 45/138 (32.61%), Postives = 77/138 (55.80%), Query Frame = 1
Query: 16 AEERVERERALDDSVE--------KAVQNGLSTDGACRLRDILGRRVNDFQRALHGDPPARMEPMRVQLKPHAKAVKGKPRRYNPVKTGWLASCIAAVVAFGLLVHNIQAVWASPAMAVPKRDA--FRLVSDYQAVNS 399
AE+ ER R +V+ +A GL+ A RL D+L + ++ F+ L DPP ++EP++V++KP + VK RRY P+ ++ S +AA+ A G++ N +A WA+ VPK++ R+ D + +N+
Sbjct: 744 AEDEAERRRTKQGAVQAILTAKAAEAETRGLAPAEATRLHDLLAKHIDVFREDLGDDPPVKVEPLKVRIKPGSTPVKCGMRRYPPLHVEYMRSHVAALEANGMVYQNNRATWAAAPRIVPKKEVGDLRMTIDSRPINA 881
BLAST of mRNA_H-canaliculatus_M_contigs75154.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0Q2T5_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 5.030e-14 Identity = 46/119 (38.66%), Postives = 67/119 (56.30%), Query Frame = 1
Query: 43 ALDDSVEKAVQNGLSTDGACRLRDILGRRVNDFQRALHGDPPARMEPMRVQLKPHAKAVKGKPRRYNPVKTGWLASCIAAVVAFGLLVHNIQAVWASPAMAVPKRDA-FRLVSDYQAVN 396
A++ +E AVQ G + RLR I R + ++ L DPPAR+ PM+++LKP AK + KPR+Y P +L A +V G + N ++ WA PA+ V K FR +DY+ VN
Sbjct: 128 AVEKMIESAVQKGFPKESVPRLRRIATR-YDIWRLRLGDDPPARVPPMKIRLKPGAKPYRCKPRKYPPEVRRFLDDFNAELVRLGWVYENTESRWACPALPVRKTGGEFRQTADYKPVN 245 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs75154.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs75154.1.1 >prot_H-canaliculatus_M_contigs75154.1.1 ID=prot_H-canaliculatus_M_contigs75154.1.1|Name=mRNA_H-canaliculatus_M_contigs75154.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=133bp MFIDPAEERVERERALDDSVEKAVQNGLSTDGACRLRDILGRRVNDFQRAback to top mRNA from alignment at H-canaliculatus_M_contigs75154:140..538+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs75154.1.1 ID=mRNA_H-canaliculatus_M_contigs75154.1.1|Name=mRNA_H-canaliculatus_M_contigs75154.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=399bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75154:140..538+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs75154:140..538+ >mRNA_H-canaliculatus_M_contigs75154.1.1 ID=mRNA_H-canaliculatus_M_contigs75154.1.1|Name=mRNA_H-canaliculatus_M_contigs75154.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=399bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75154:140..538+ (Hapterophycus canaliculatus Oshoro7m male)back to top |