mRNA_H-canaliculatus_M_contigs75140.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs75140.1.1 vs.
Match: Periplasmic (serine endoprotease DegP-like n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A357I6M6_9GAMM) HSP 1 Score: 164 bits (416), Expect = 1.270e-45 Identity = 91/187 (48.66%), Postives = 128/187 (68.45%), Query Frame = 1
Query: 1 NTAIVGPSGGNVGIGFAIPANMAVNIIDQLIEYGEVKRGSLGIAAQELTPRLAEAFGIEARYGVIISRIREGSSADKAGLRVGDVITAIDGRPVRDIKAVRNRIGLVRLGQRMQLSVLRDN----VSVDIDAVVERLIY--INPLLEGVEFETRSSSNGCKNIVVSSVAQGSSFDRYGLEESDVALS 543
NTAIVGPSGGNVGIGFAIP+NMA I+ LI++GEV+RG LG+++Q LT LAEAFGI+ GV+I + S+ADKAGLR GDV+ A++GRPVR+ ++VRN +GL+ +G ++L ++RD V +DA +RL ++ LL+GV F + NG + + + +GS + GL E D+ LS
Sbjct: 222 NTAIVGPSGGNVGIGFAIPSNMAQQILQHLIDFGEVRRGRLGVSSQNLTRELAEAFGIDDSRGVVIIDVVPDSAADKAGLRRGDVVVAVEGRPVRNAESVRNIMGLMLVGHEVELDIVRDGQRRKVVARVDARDDRLAGAGLSRLLKGVMFINAETRNGRAYVQIGQLERGSRLYKQGLREGDIILS 408
BLAST of mRNA_H-canaliculatus_M_contigs75140.1.1 vs.
Match: Periplasmic (serine endoprotease DegP-like n=1 Tax=Acidihalobacter prosperus TaxID=160660 RepID=A0A1A6C1B8_9GAMM) HSP 1 Score: 160 bits (405), Expect = 6.460e-44 Identity = 86/195 (44.10%), Postives = 130/195 (66.67%), Query Frame = 1
Query: 1 NTAIVGPSGGNVGIGFAIPANMAVNIIDQLIEYGEVKRGSLGIAAQELTPRLAEAFGIEARYGVIISRIREGSSADKAGLRVGDVITAIDGRPVRDIKAVRNRIGLVRLGQRMQLSVLRDNVSVDIDAVVERLIY-------INPLLEGV-------EFETRSSSNGCKNIVVSSVAQGSSFDRYGLEESDVALS 543
NTAI+GP G N+GIGFAIP NMA++++DQL++YG V+RG +GIAAQ LTP LA+AFG++ G II++++ GS ADKAGL+ GD++TA++G +RD +RN GL+R+G R+++ VLR + + V+ + + ++PLL G E ++ +G I V +VA GS+ +R GL++ DV S
Sbjct: 227 NTAILGPDGANIGIGFAIPVNMAIDVMDQLVKYGRVERGHIGIAAQSLTPALAKAFGVKQEQGAIIAQVQPGSPADKAGLKAGDIVTAVNGHDIRDAAQMRNIFGLLRVGTRVEVQVLRHDRPLRFAVVIAKPAHATVAGARLSPLLAGATLGEVPAELALQAKLHG---IAVMAVAAGSAAERGGLQKGDVIQS 418
BLAST of mRNA_H-canaliculatus_M_contigs75140.1.1 vs.
Match: DegQ (family serine endoprotease n=2 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=UPI001C02651A) HSP 1 Score: 160 bits (404), Expect = 8.420e-44 Identity = 87/189 (46.03%), Postives = 121/189 (64.02%), Query Frame = 1
Query: 1 NTAIVGPSGGNVGIGFAIPANMAVNIIDQLIEYGEVKRGSLGIAAQELTPRLAEAFGIEARY-GVIISRIREGSSADKAGLRVGDVITAIDGRPVRDIKAVRNRIGLVRLGQRMQLSVLRDNVSVDIDAVVERLIY-------INPLLEGVEFETRSSSNGCKNIVVSSVAQGSSFDRYGLEESDVALS 543
NTAIVGPSGGNVGIGFAIPANM ++DQL+ YGEV+RG LGIA Q+LT L++A G+ + G +++ + GS+A++AGL+ GDVIT++D PVR A+RN+IGL+R+G +L+V R S+ I A V + +NPLL+G F + + + V SV G R GL + D+ S
Sbjct: 227 NTAIVGPSGGNVGIGFAIPANMIREVMDQLVRYGEVRRGRLGIAVQDLTAELSDAMGLPSHQSGAVVANVEAGSAAERAGLKSGDVITSVDNTPVRSASALRNKIGLLRVGDTAELAVTRGGKSMVIRATVATPVQKLFQGGQVNPLLDGATFGPVTVDTSIRGVEVISVQAGRKAARAGLRKGDIITS 415
BLAST of mRNA_H-canaliculatus_M_contigs75140.1.1 vs.
Match: Periplasmic (serine endoprotease DegP-like n=1 Tax=Aquisalimonas sp. 2447 TaxID=2740807 RepID=A0A6H0IZR5_9GAMM) HSP 1 Score: 159 bits (402), Expect = 1.570e-43 Identity = 83/191 (43.46%), Postives = 127/191 (66.49%), Query Frame = 1
Query: 1 NTAIVGPSGGNVGIGFAIPANMAVNIIDQLIEYGEVKRGSLGIAAQELTPRLAEAFGIEARYGVIISRIREGSSADKAGLRVGDVITAIDGRPVRDIKAVRNRIGLVRLGQRMQLSVLRDNVSVDIDAVVERLIY-------INPLLEGVEF---ETRSSSNGCKNIVVSSVAQGSSFDRYGLEESDVALS 543
NTAI+ P+GGNVGIGFAIP NMA ++++QLIE+GE++RG LG++AQ+LTP LAEAF + R GV+I+R+ GS AD+AG+ GD++ A++GR +R + +RN IGL+R+G+ + L V R+ +++ ++ I+ LEG F + R ++ + +VV +V GS R GL + D+ LS
Sbjct: 223 NTAILSPAGGNVGIGFAIPTNMARSVMEQLIEHGEIQRGQLGVSAQDLTPDLAEAFDLRERSGVVITRVESGSPADQAGIETGDIVLAVNGRGIRQVSDLRNAIGLLRVGETVTLRVSREGEVMELAVPIQEPALTTLDGGRIHTRLEGATFGDVQQRVRADSVQRVVVRNVEPGSPAQRAGLRDDDIILS 413
BLAST of mRNA_H-canaliculatus_M_contigs75140.1.1 vs.
Match: Periplasmic (serine endoprotease DegP-like n=1 Tax=Bosea psychrotolerans TaxID=1871628 RepID=A0A2S4LXD2_9HYPH) HSP 1 Score: 159 bits (402), Expect = 1.650e-43 Identity = 91/189 (48.15%), Postives = 122/189 (64.55%), Query Frame = 1
Query: 1 NTAIVGPSGGNVGIGFAIPANMAVNIIDQLIEYGEVKRGSLGIAAQELTPRLAEAFGIEARY-GVIISRIREGSSADKAGLRVGDVITAIDGRPVRDIKAVRNRIGLVRLGQRMQLSVLRDNVSV----DIDAVVERLI---YINPLLEGVEFETRSSSNGCKNIVVSSVAQGSSFDRYGLEESDVALS 543
NTAIVGP+GGNVGIGFAIPANM +++DQL++YG V+RG LG+ Q+LT LA A G+ G +I+ + GS+A++AGL+VGDVITAID PVR +RN+IGL+R+G L +LR S+ + A V++LI INPLLEG F ++ + V SV GS R GL + D+ S
Sbjct: 227 NTAIVGPAGGNVGIGFAIPANMVRDVMDQLVKYGSVRRGRLGVVVQDLTHDLAGAMGLATNQSGAVIANVEAGSAAERAGLKVGDVITAIDKAPVRSASDLRNKIGLLRIGDVADLVLLRGGKSMVVRASVAAPVQKLIEGGQINPLLEGASFGPVTADKSTNGVQVISVQTGSKAARAGLRKGDIITS 415
BLAST of mRNA_H-canaliculatus_M_contigs75140.1.1 vs.
Match: Periplasmic (serine endoprotease DegP-like n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E0WQK1_9GAMM) HSP 1 Score: 159 bits (402), Expect = 1.880e-43 Identity = 89/192 (46.35%), Postives = 121/192 (63.02%), Query Frame = 1
Query: 1 NTAIVGPSGGNVGIGFAIPANMAVNIIDQLIEYGEVKRGSLGIAAQELTPRLAEAFGIEARYGVIISRIREGSSADKAGLRVGDVITAIDGRPVRDIKAVRNRIGLVRLGQRMQLSVLRDNVSVDIDAVVERLIY-------INPLLEGVEFETR----SSSNGCKNIVVSSVAQGSSFDRYGLEESDVALS 543
NTAI+GPSGGNVGIGFAIPANMA ++ QL+E+G V+RG LG++ Q+LTP LA AF + R G +++ + EGS AD+AGL VGD+I ++GRPV D VRN IGL+R+G ++L+VLRD +++ A +E +P LEG S + I+V V GS R GL+ DV +S
Sbjct: 231 NTAIIGPSGGNVGIGFAIPANMARAVMQQLVEHGRVERGRLGVSVQDLTPELARAFDLSRRQGTVVADVSEGSPADRAGLEVGDIILMVNGRPVGDSADVRNHIGLLRVGDSVRLTVLRDGRKLELTARIEAAQSSRADGGRFHPRLEGARLREITGDISRPGRRRGILVEEVTPGSPAARAGLQAGDVIVS 422
BLAST of mRNA_H-canaliculatus_M_contigs75140.1.1 vs.
Match: Periplasmic (serine endoprotease DegP-like n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A431IGE7_9GAMM) HSP 1 Score: 159 bits (401), Expect = 2.870e-43 Identity = 92/197 (46.70%), Postives = 126/197 (63.96%), Query Frame = 1
Query: 1 NTAIVGPSGGNVGIGFAIPANMAVNIIDQLIEYGEVKRGSLGIAAQELTPRLAEAFGIEARYGVIISRIREGSSADKAGLRVGDVITAIDGRPVRDIKAVRNRIGLVRLGQRMQLSVLRDNVSVDIDAVVE-----RLI--------YINPLLEGVEF----ETRSSSNGCKNIVVSSVAQGSSFDRYGLEESDVAL 540
NTAI+ PSGGNVGIGFAIP NMA ++DQ++ +G ++RG LG+A Q+LTP+LAEAFGI G +IS+I S+A+KAGLRVGDVITA++ RPVRD A+RN IGL+R+G ++L +LR+ + + A + R+ +NP LEG F + S ++V++V GS R GL DV L
Sbjct: 231 NTAILAPSGGNVGIGFAIPINMARQVMDQIVRHGAIRRGLLGVATQDLTPQLAEAFGIRTDQGAVISQIGAKSAAEKAGLRVGDVITAVNDRPVRDSAALRNSIGLLRVGDEVRLGLLREGKPLSLTARLGEGRGGRVADSSGGGGKALNPRLEGASFGNLPDGHPLSGEVDGVLVNAVEAGSPAARGGLRRGDVIL 427
BLAST of mRNA_H-canaliculatus_M_contigs75140.1.1 vs.
Match: DegQ (family serine endoprotease n=1 Tax=Thioalkalivibrio thiocyanodenitrificans TaxID=243063 RepID=UPI000475C36F) HSP 1 Score: 158 bits (400), Expect = 3.370e-43 Identity = 91/192 (47.40%), Postives = 123/192 (64.06%), Query Frame = 1
Query: 1 NTAIVGPSGGNVGIGFAIPANMAVNIIDQLIEYGEVKRGSLGIAAQELTPRLAEAFGIEARYGVIISRIREGSSADKAGLRVGDVITAIDGRPVRDIKAVRNRIGLVRLGQRMQLSVLRDNVSVDIDAVVERLIY-------INPLLEGVEF----ETRSSSNGCKNIVVSSVAQGSSFDRYGLEESDVALS 543
NTAI+ GGN+GIGFAIPANMA+ I++ L+EYGEV+RG LG+ Q+LTP LA+AFGI G +ISR+ GS+AD+AGLR GDV+ +DGR VR+ +RN IGL+R+G ++L V+RDN I A V + ++ LL+G F E + ++V+S+ GS R GL E DV LS
Sbjct: 226 NTAILSRGGGNIGIGFAIPANMALQIMEHLVEYGEVRRGRLGVMVQDLTPDLAQAFGIPQTRGAVISRVEPGSAADRAGLREGDVVLQVDGRAVRNAGEMRNIIGLLRVGAEVELEVVRDNRRHTITAQVGEIEITTLEGGQLSRLLDGAGFSDIPEDSPLYGRVRGVLVASLEGGSRAARAGLREGDVILS 417
BLAST of mRNA_H-canaliculatus_M_contigs75140.1.1 vs.
Match: Periplasmic (serine endoprotease DegP-like n=1 Tax=Thiotrichales bacterium TaxID=2026796 RepID=A0A7C5WSA7_9GAMM) HSP 1 Score: 158 bits (399), Expect = 3.660e-43 Identity = 90/189 (47.62%), Postives = 123/189 (65.08%), Query Frame = 1
Query: 1 NTAIVGPSG-GNVGIGFAIPANMAVNIIDQLIEYGEVKRGSLGIAAQELTPRLAEAFGIEARYGVIISRIREGSSADKAGLRVGDVITAIDGRPVRDIKAVRNRIGLVRLGQRMQLSVLRDNVSVDIDAVVERLIY-------INPLLEGVEFETRSSSNGCKNIVVSSVAQGSSFDRYGLEESDVALS 543
NTAI+ G GNVGIGFAIP NM I+DQLIEYGEV+RG LG+ Q LTP L+ AFG+E GV+IS++ + S+A KAGL+ GDV+ +I+G+PV+ A+RN +GL+R+G M + V+RD +++ AV+E I +N LEG FE NG + +VVS V +GS L + D+ LS
Sbjct: 216 NTAILASGGTGNVGIGFAIPINMVRQIVDQLIEYGEVRRGMLGVIMQNLTPELSRAFGLETHQGVVISQVIDDSAASKAGLKAGDVVESINGKPVKSASAMRNMVGLMRVGDDMDIVVIRDGDKMEMTAVIEDEIEQTLAGEKLNARLEGAVFEAHDD-NGNQYLVVSDVERGSPAWGARLRKGDMILS 403
BLAST of mRNA_H-canaliculatus_M_contigs75140.1.1 vs.
Match: Periplasmic (serine endoprotease DegP-like n=7 Tax=Photobacterium TaxID=657 RepID=A0A0C5W7B0_9GAMM) HSP 1 Score: 158 bits (399), Expect = 4.630e-43 Identity = 79/187 (42.25%), Postives = 122/187 (65.24%), Query Frame = 1
Query: 1 NTAIVGPSGGNVGIGFAIPANMAVNIIDQLIEYGEVKRGSLGIAAQELTPRLAEAFGIEARYGVIISRIREGSSADKAGLRVGDVITAIDGRPVRDIKAVRNRIGLVRLGQRMQLSVLRDNVSVDIDAVVERLIY-------INPLLEGVEFETRSSSNGCKNIVVSSVAQGSSFDRYGLEESDVAL 540
NTAI+GP+GGNVGIGFAIP NM N+ +Q++E+GEVKRG LG+ ELT LAEAFG E +G I+++ S+A+KAGL+ GD+I +++G+ +R +R +I + G+++ L ++RD ++D+ A ++ ++ L G EF +SS+G K + V+S+ + S RYGL E D+ L
Sbjct: 229 NTAILGPNGGNVGIGFAIPVNMVKNLTEQILEFGEVKRGVLGVQGGELTSELAEAFGYETNHGAFINQVMPDSAAEKAGLKAGDIIVSVNGKQIRTFGELRAKIATLGAGKQVSLGIVRDGKAIDVTAKLKEASVNKVKADSLHEGLAGAEFANTTSSDGSKGVKVTSLQENSEAARYGLREGDIIL 415 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs75140.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs75140.1.1 >prot_H-canaliculatus_M_contigs75140.1.1 ID=prot_H-canaliculatus_M_contigs75140.1.1|Name=mRNA_H-canaliculatus_M_contigs75140.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=181bp NTAIVGPSGGNVGIGFAIPANMAVNIIDQLIEYGEVKRGSLGIAAQELTPback to top mRNA from alignment at H-canaliculatus_M_contigs75140:1..543- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs75140.1.1 ID=mRNA_H-canaliculatus_M_contigs75140.1.1|Name=mRNA_H-canaliculatus_M_contigs75140.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=543bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75140:1..543- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs75140:1..543- >mRNA_H-canaliculatus_M_contigs75140.1.1 ID=mRNA_H-canaliculatus_M_contigs75140.1.1|Name=mRNA_H-canaliculatus_M_contigs75140.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=543bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75140:1..543- (Hapterophycus canaliculatus Oshoro7m male)back to top |