mRNA_H-canaliculatus_M_contigs751.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs751.1.1 vs.
Match: Kinesin-like (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQV1_ECTSI) HSP 1 Score: 224 bits (571), Expect = 2.020e-66 Identity = 123/142 (86.62%), Postives = 131/142 (92.25%), Query Frame = 1
Query: 1 LRQPAGGGAGRVPYRESVLTFLLKDSLGGNSHTTMIATIRPGLRYLEETMSTLRYADQAKRIVNSVRINEDPFARTVRRLQEEISALKRELAASRRKESLALAQADGLRREIDLLQVVDATLIASIKRHEVNGAGQTVTRKV 426
LRQ GGG GRVPYRESVLTFLLKDSLGGNSHTTMIATIRPG+R+LEETMSTLRYADQAK IVNSV++NEDPFARTVRRLQEEISALKRELA+SRR+ESLA AQADGL+REIDLLQVVDATLIASIKRH+ N G VT KV
Sbjct: 624 LRQSIGGG-GRVPYRESVLTFLLKDSLGGNSHTTMIATIRPGVRFLEETMSTLRYADQAKSIVNSVKVNEDPFARTVRRLQEEISALKRELASSRRRESLARAQADGLKREIDLLQVVDATLIASIKRHD-NNTGHGVTSKV 763
BLAST of mRNA_H-canaliculatus_M_contigs751.1.1 vs.
Match: Kinesin-like (protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ89_9STRA) HSP 1 Score: 113 bits (282), Expect = 2.510e-26 Identity = 56/94 (59.57%), Postives = 74/94 (78.72%), Query Frame = 1
Query: 16 GGGAGRVPYRESVLTFLLKDSLGGNSHTTMIATIRPGLRYLEETMSTLRYADQAKRIVNSVRINEDPFARTVRRLQEEISALKRELAASRRKES 297
G G VPYR+SVLTFLLKDSLGGNS TTM+ATIRPGL + EE++STLRYAD+AK IVN +NEDP + +R +Q++I L +LA+++ +E+
Sbjct: 385 GNGKPVVPYRDSVLTFLLKDSLGGNSRTTMLATIRPGLAFYEESLSTLRYADRAKSIVNQAVVNEDPLTKKIRSMQDQIEFLTLQLASAQEREA 478
BLAST of mRNA_H-canaliculatus_M_contigs751.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D535_9STRA) HSP 1 Score: 113 bits (282), Expect = 2.650e-26 Identity = 56/94 (59.57%), Postives = 74/94 (78.72%), Query Frame = 1
Query: 16 GGGAGRVPYRESVLTFLLKDSLGGNSHTTMIATIRPGLRYLEETMSTLRYADQAKRIVNSVRINEDPFARTVRRLQEEISALKRELAASRRKES 297
G G VPYR+SVLTFLLKDSLGGNS TTM+ATIRPGL + EE++STLRYAD+AK IVN +NEDP + +R +Q++I L +LA+++ +E+
Sbjct: 1021 GNGKPVVPYRDSVLTFLLKDSLGGNSRTTMLATIRPGLAFYEESLSTLRYADRAKSIVNQAVVNEDPLTKKIRSMQDQIEFLTLQLASAQEREA 1114
BLAST of mRNA_H-canaliculatus_M_contigs751.1.1 vs.
Match: Kinesin-like (protein (Fragment) n=1 Tax=Micrurus paraensis TaxID=1970185 RepID=A0A2D4KNP4_9SAUR) HSP 1 Score: 106 bits (265), Expect = 1.460e-25 Identity = 57/91 (62.64%), Postives = 69/91 (75.82%), Query Frame = 1
Query: 7 QPAGGGAGR-VPYRESVLTFLLKDSLGGNSHTTMIATIRPGLRYLEETMSTLRYADQAKRIVNSVRINEDPFARTVRRLQEEISALKRELA 276
Q AG G + VPYR+SVLT+LLKD+LGGNS T MIATI P EET+STLRYAD+AKRIVN +NEDP AR +R L+EE+ LK +L+
Sbjct: 164 QAAGKGKNKFVPYRDSVLTWLLKDNLGGNSQTAMIATISPAADNYEETLSTLRYADRAKRIVNHAIVNEDPNARLIRELREEVEKLKEQLS 254
BLAST of mRNA_H-canaliculatus_M_contigs751.1.1 vs.
Match: Putative (kinesin-like protein KIF13B (Fragment) n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8JF69_STIJA) HSP 1 Score: 102 bits (254), Expect = 5.730e-25 Identity = 59/107 (55.14%), Postives = 80/107 (74.77%), Query Frame = 1
Query: 34 VPYRESVLTFLLKDSLGGNSHTTMIATIRPGLRYLEETMSTLRYADQAKRIVNSVRINEDPFARTVRRLQEEISALKREL--AASRRKESLA--LAQADGLRREIDL 342
VPYR+SVLT+LLKDSLGGNS T M+ATI P + EET+STLRYAD+AKRIVN +NEDP AR + L+EE++ L+ +L A S + ++L LA+++ L +E+ L
Sbjct: 25 VPYRDSVLTWLLKDSLGGNSKTVMVATISPAMDNYEETLSTLRYADRAKRIVNHAVVNEDPNARIIFDLREEVTVLRNQLIEAESMKADNLKERLAESEKLIQEMTL 131
BLAST of mRNA_H-canaliculatus_M_contigs751.1.1 vs.
Match: LOW (QUALITY PROTEIN: kinesin-like protein KIF13A n=2 Tax=Gymnophiona TaxID=8445 RepID=A0A6P8QVA2_GEOSA) HSP 1 Score: 108 bits (271), Expect = 8.020e-25 Identity = 59/91 (64.84%), Postives = 70/91 (76.92%), Query Frame = 1
Query: 7 QPAGGGAGR-VPYRESVLTFLLKDSLGGNSHTTMIATIRPGLRYLEETMSTLRYADQAKRIVNSVRINEDPFARTVRRLQEEISALKRELA 276
Q AG G G+ VPYR+SVLT+LLKD+LGGNS T MIATI P EET+STLRYAD+AKRIVN INEDP AR +R L+EE+ LK +L+
Sbjct: 293 QAAGKGKGKFVPYRDSVLTWLLKDNLGGNSKTAMIATISPAADNYEETLSTLRYADRAKRIVNHAVINEDPNARLIRELREEVEKLKEQLS 383
BLAST of mRNA_H-canaliculatus_M_contigs751.1.1 vs.
Match: Kinesin-like (protein (Fragment) n=2 Tax=Lithobates catesbeianus TaxID=8400 RepID=A0A2G9P7T0_LITCT) HSP 1 Score: 106 bits (265), Expect = 9.440e-25 Identity = 57/91 (62.64%), Postives = 69/91 (75.82%), Query Frame = 1
Query: 7 QPAGGGAGR-VPYRESVLTFLLKDSLGGNSHTTMIATIRPGLRYLEETMSTLRYADQAKRIVNSVRINEDPFARTVRRLQEEISALKRELA 276
Q AG G + VPYR+SVLT+LLKD+LGGNS T MIATI P EET+STLRYAD+AKRIVN +NEDP AR +R L+EE+ LK +L+
Sbjct: 111 QAAGKGKNKFVPYRDSVLTWLLKDNLGGNSKTAMIATISPAADNYEETLSTLRYADRAKRIVNHAVVNEDPNARVIRELREEVDKLKEQLS 201
BLAST of mRNA_H-canaliculatus_M_contigs751.1.1 vs.
Match: Kinesin (motor domain-containing protein n=1 Tax=Pavo cristatus TaxID=9049 RepID=A0A8C9EJI1_PAVCR) HSP 1 Score: 107 bits (266), Expect = 1.990e-24 Identity = 57/91 (62.64%), Postives = 69/91 (75.82%), Query Frame = 1
Query: 7 QPAGGGAGR-VPYRESVLTFLLKDSLGGNSHTTMIATIRPGLRYLEETMSTLRYADQAKRIVNSVRINEDPFARTVRRLQEEISALKRELA 276
Q AG G + VPYR+SVLT+LLKD+LGGNS T MIATI P EET+STLRYAD+AKRIVN +NEDP AR +R L+EE+ LK +L+
Sbjct: 49 QAAGKGKNKFVPYRDSVLTWLLKDNLGGNSQTAMIATISPAADNYEETLSTLRYADRAKRIVNHAVVNEDPNARVIRELREEVEKLKEQLS 139
BLAST of mRNA_H-canaliculatus_M_contigs751.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Timema genevievae TaxID=629358 RepID=A0A7R9JV39_TIMGE) HSP 1 Score: 102 bits (254), Expect = 2.390e-24 Identity = 53/91 (58.24%), Postives = 67/91 (73.63%), Query Frame = 1
Query: 1 LRQPAGGGAGR---VPYRESVLTFLLKDSLGGNSHTTMIATIRPGLRYLEETMSTLRYADQAKRIVNSVRINEDPFARTVRRLQEEISALK 264
L + GG + VPYR+SVLT+LLKD+LGGNS T M+AT+ P EET+STLRYAD+AKRIVN +NEDP AR +R L++E+ ALK
Sbjct: 29 LADQSSGGKNKDKFVPYRDSVLTWLLKDNLGGNSRTVMVATVSPASDNYEETLSTLRYADRAKRIVNYAIVNEDPNARIIRELRQEVEALK 119
BLAST of mRNA_H-canaliculatus_M_contigs751.1.1 vs.
Match: Kinesin (family member 13A n=1 Tax=Loxodonta africana TaxID=9785 RepID=G3U6H2_LOXAF) HSP 1 Score: 107 bits (267), Expect = 2.750e-24 Identity = 57/91 (62.64%), Postives = 70/91 (76.92%), Query Frame = 1
Query: 7 QPAGGGAGR-VPYRESVLTFLLKDSLGGNSHTTMIATIRPGLRYLEETMSTLRYADQAKRIVNSVRINEDPFARTVRRLQEEISALKRELA 276
Q AG G + VPYR+SVLT+LLKD+LGGNS T+MIATI P EET+STLRYAD+AKRIVN +NEDP AR +R L+EE+ LK +L+
Sbjct: 274 QAAGKGKNKFVPYRDSVLTWLLKDNLGGNSQTSMIATISPAADNYEETLSTLRYADRAKRIVNHAIVNEDPNARVIRELREEVEKLKEQLS 364 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs751.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs751.1.1 >prot_H-canaliculatus_M_contigs751.1.1 ID=prot_H-canaliculatus_M_contigs751.1.1|Name=mRNA_H-canaliculatus_M_contigs751.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=142bp LRQPAGGGAGRVPYRESVLTFLLKDSLGGNSHTTMIATIRPGLRYLEETMback to top mRNA from alignment at H-canaliculatus_M_contigs751:2..3727+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs751.1.1 ID=mRNA_H-canaliculatus_M_contigs751.1.1|Name=mRNA_H-canaliculatus_M_contigs751.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=3726bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs751:2..3727+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs751:2..3727+ >mRNA_H-canaliculatus_M_contigs751.1.1 ID=mRNA_H-canaliculatus_M_contigs751.1.1|Name=mRNA_H-canaliculatus_M_contigs751.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=426bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs751:2..3727+ (Hapterophycus canaliculatus Oshoro7m male)back to top |