mRNA_H-canaliculatus_M_contigs75058.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs75058.1.1
Unique NamemRNA_H-canaliculatus_M_contigs75058.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs75058.1.1 vs.
Match: Phosphorylase (kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT01_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 8.370e-17
Identity = 37/42 (88.10%), Postives = 41/42 (97.62%), Query Frame = 1 
Query:   10 QPENLLLVDKKDDANLKIADFGFAKKHDAGSEILKTQCGTPG 135
            +PENLLLVDK+D+ANLKIADFGFAKKHDA SE+LKTQCGTPG
Sbjct:  143 KPENLLLVDKEDNANLKIADFGFAKKHDARSEVLKTQCGTPG 184
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BLAST of mRNA_H-canaliculatus_M_contigs75058.1.1 vs.
Match: Phosphorylase (kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE50_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 1.140e-16
Identity = 37/42 (88.10%), Postives = 41/42 (97.62%), Query Frame = 1 
Query:   10 QPENLLLVDKKDDANLKIADFGFAKKHDAGSEILKTQCGTPG 135
            +PENLLLVDK+D+ANLKIADFGFAKKHDA SE+LKTQCGTPG
Sbjct:  142 KPENLLLVDKQDNANLKIADFGFAKKHDARSEVLKTQCGTPG 183
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BLAST of mRNA_H-canaliculatus_M_contigs75058.1.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BZ50_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 4.180e-11
Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = 1 
Query:    1 LLPQPENLLLVDKKDDANLKIADFGFAKKHDAGSEILKTQCGTPG 135
            +L QPENLLL  K DDA++K+ADFGFAK+ D   E LKT CGTPG
Sbjct:   97 VLKQPENLLLTSKMDDASIKLADFGFAKRVDMHDEGLKTACGTPG 141
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BLAST of mRNA_H-canaliculatus_M_contigs75058.1.1 vs.
Match: Uncharacterized (protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AXS0_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 1.040e-10
Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = 1 
Query:    1 LLPQPENLLLVDKKDDANLKIADFGFAKKHDAGSEILKTQCGTPG 135
            +L QPENLLL  K DDA++K+ADFGFAK+ D   E LKT CGTPG
Sbjct: 1521 VLKQPENLLLTSKMDDASIKLADFGFAKRVDMHDEGLKTACGTPG 1565
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BLAST of mRNA_H-canaliculatus_M_contigs75058.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425D1E9_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 1.050e-10
Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = 1 
Query:    1 LLPQPENLLLVDKKDDANLKIADFGFAKKHDAGSEILKTQCGTPG 135
            +L QPENLLL  K DDA++K+ADFGFAK+ D   E LKT CGTPG
Sbjct:  465 VLKQPENLLLTSKMDDASIKLADFGFAKRVDMHDEGLKTACGTPG 509
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BLAST of mRNA_H-canaliculatus_M_contigs75058.1.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6VF10_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 3.280e-10
Identity = 29/42 (69.05%), Postives = 33/42 (78.57%), Query Frame = 1 
Query:   10 QPENLLLVDKKDDANLKIADFGFAKKHDAGSEILKTQCGTPG 135
            QPENLLL  K DDA++K+ADFGFAK+ D   E LKT CGTPG
Sbjct:  123 QPENLLLTSKLDDASIKLADFGFAKRVDMHDEGLKTACGTPG 164
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BLAST of mRNA_H-canaliculatus_M_contigs75058.1.1 vs.
Match: Protein (kinase domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AAZ6_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 6.060e-10
Identity = 28/41 (68.29%), Postives = 32/41 (78.05%), Query Frame = 1 
Query:   13 PENLLLVDKKDDANLKIADFGFAKKHDAGSEILKTQCGTPG 135
            PENLLL  K DDA++K+ADFGFAK+ D   E LKT CGTPG
Sbjct:    1 PENLLLTSKMDDASIKLADFGFAKRVDMHDEGLKTACGTPG 41
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BLAST of mRNA_H-canaliculatus_M_contigs75058.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DK86_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 9.330e-10
Identity = 28/45 (62.22%), Postives = 35/45 (77.78%), Query Frame = 1 
Query:    1 LLPQPENLLLVDKKDDANLKIADFGFAKKHDAGSEILKTQCGTPG 135
            ++ +PENLLL  K DDA++K+ADFGFAK+ D   E LKT CGTPG
Sbjct:  527 VVEKPENLLLTSKMDDASIKLADFGFAKRVDMHDEGLKTACGTPG 571
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BLAST of mRNA_H-canaliculatus_M_contigs75058.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DFG8_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 9.330e-10
Identity = 28/45 (62.22%), Postives = 35/45 (77.78%), Query Frame = 1 
Query:    1 LLPQPENLLLVDKKDDANLKIADFGFAKKHDAGSEILKTQCGTPG 135
            ++ +PENLLL  K DDA++K+ADFGFAK+ D   E LKT CGTPG
Sbjct:  369 VVEKPENLLLTSKMDDASIKLADFGFAKRVDMHDEGLKTACGTPG 413
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BLAST of mRNA_H-canaliculatus_M_contigs75058.1.1 vs.
Match: CAMK/CAMK1 (protein kinase n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FK29_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.270e-9
Identity = 28/42 (66.67%), Postives = 33/42 (78.57%), Query Frame = 1 
Query:   10 QPENLLLVDKKDDANLKIADFGFAKKHDAGSEILKTQCGTPG 135
            +PENLLL  K DDA++K+ADFGFAK+ D   E LKT CGTPG
Sbjct:  211 KPENLLLTSKMDDASIKLADFGFAKRVDMHDEGLKTACGTPG 252
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs75058.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Phosphorylase8.370e-1788.10kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=8... [more]
Phosphorylase1.140e-1688.10kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 R... [more]
Protein4.180e-1166.67kinase domain-containing protein n=1 Tax=Aphanomyc... [more]
Uncharacterized1.040e-1066.67protein n=3 Tax=Aphanomyces astaci TaxID=112090 Re... [more]
Uncharacterized1.050e-1066.67protein n=1 Tax=Aphanomyces astaci TaxID=112090 Re... [more]
Protein3.280e-1069.05kinase domain-containing protein n=1 Tax=Aphanomyc... [more]
Protein6.060e-1068.29kinase domain-containing protein (Fragment) n=1 Ta... [more]
Uncharacterized9.330e-1062.22protein n=1 Tax=Aphanomyces astaci TaxID=112090 Re... [more]
Uncharacterized9.330e-1062.22protein n=2 Tax=Aphanomyces astaci TaxID=112090 Re... [more]
CAMK/CAMK11.270e-966.67protein kinase n=4 Tax=Aphanomyces astaci TaxID=11... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs75058contigH-canaliculatus_M_contigs75058:362..496 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LE50
PFAMsPkinase,Pkinase_C
Model size135
Max annot lvl2759|Eukaryota
KEGG koko:K04373,ko:K04445
KEGG Pathwayko04010,ko04114,ko04150,ko04261,ko04668,ko04713,ko04714,ko04720,ko04722,ko04914,ko04931,ko05200,ko05206,ko05219,map04010,map04114,map04150,map04261,map04668,map04713,map04714,map04720,map04722,map04914,map04931,map05200,map05206,map05219
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Evalue1.86e-17
EggNOG OGsKOG0603@1|root,KOG0603@2759|Eukaryota
EC2.7.11.1
Descriptionprotein serine/threonine kinase activity
Cds size135
COG categoryG
BRITEko00000,ko00001,ko01000,ko01001,ko03019
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854088.444015-CDS-H-canaliculatus_M_contigs75058:361..4961696854088.444015-CDS-H-canaliculatus_M_contigs75058:361..496Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs75058 362..496 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs75058.1.1prot_H-canaliculatus_M_contigs75058.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs75058 362..496 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs75058.1.1

>prot_H-canaliculatus_M_contigs75058.1.1 ID=prot_H-canaliculatus_M_contigs75058.1.1|Name=mRNA_H-canaliculatus_M_contigs75058.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=45bp
LLPQPENLLLVDKKDDANLKIADFGFAKKHDAGSEILKTQCGTPG
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mRNA from alignment at H-canaliculatus_M_contigs75058:362..496-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs75058.1.1 ID=mRNA_H-canaliculatus_M_contigs75058.1.1|Name=mRNA_H-canaliculatus_M_contigs75058.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=135bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75058:362..496- (Hapterophycus canaliculatus Oshoro7m male)
TTGTTGCCTCAGCCCGAGAACCTGCTTCTGGTGGACAAGAAGGACGACGC
TAACCTAAAAATTGCCGACTTCGGCTTCGCTAAGAAGCACGACGCTGGCT
CCGAGATCCTTAAGACGCAGTGCGGCACACCAGGA
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs75058:362..496-

>mRNA_H-canaliculatus_M_contigs75058.1.1 ID=mRNA_H-canaliculatus_M_contigs75058.1.1|Name=mRNA_H-canaliculatus_M_contigs75058.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=135bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75058:362..496- (Hapterophycus canaliculatus Oshoro7m male)
TTGTTGCCTCAGCCCGAGAACCTGCTTCTGGTGGACAAGAAGGACGACGC
TAACCTAAAAATTGCCGACTTCGGCTTCGCTAAGAAGCACGACGCTGGCT
CCGAGATCCTTAAGACGCAGTGCGGCACACCAGGA
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