mRNA_H-canaliculatus_M_contigs75046.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs75046.1.1
Unique NamemRNA_H-canaliculatus_M_contigs75046.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs75046.1.1 vs.
Match: Proline (dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU94_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 6.190e-23
Identity = 46/49 (93.88%), Postives = 48/49 (97.96%), Query Frame = 1 
Query:    1 QAYKYIPYGKVGETIPYLLRRAQENSAMLGGASHERGLLVKEIRRRIFG 147
            +AYKYIPYGKVGETIPYLLRRAQENS MLGGASHERGLLVKEIRRR+FG
Sbjct: 1023 KAYKYIPYGKVGETIPYLLRRAQENSGMLGGASHERGLLVKEIRRRVFG 1071
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BLAST of mRNA_H-canaliculatus_M_contigs75046.1.1 vs.
Match: Proline (dehydrogenase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPM4_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 6.190e-23
Identity = 46/49 (93.88%), Postives = 48/49 (97.96%), Query Frame = 1 
Query:    1 QAYKYIPYGKVGETIPYLLRRAQENSAMLGGASHERGLLVKEIRRRIFG 147
            +AYKYIPYGKVGETIPYLLRRAQENS MLGGASHERGLLVKEIRRR+FG
Sbjct:  738 KAYKYIPYGKVGETIPYLLRRAQENSGMLGGASHERGLLVKEIRRRVFG 786
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BLAST of mRNA_H-canaliculatus_M_contigs75046.1.1 vs.
Match: Proline (dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z648_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 2.640e-16
Identity = 33/48 (68.75%), Postives = 44/48 (91.67%), Query Frame = 1 
Query:    4 AYKYIPYGKVGETIPYLLRRAQENSAMLGGASHERGLLVKEIRRRIFG 147
            A+KY+PYG+V E +PYLLRRA+ENSA+LGGA+HER LL++E+RRR+ G
Sbjct:  521 AFKYLPYGRVAEVVPYLLRRARENSALLGGATHERALLLREVRRRMLG 568
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BLAST of mRNA_H-canaliculatus_M_contigs75046.1.1 vs.
Match: Proline (dehydrogenase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G8D0_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 5.310e-14
Identity = 32/46 (69.57%), Postives = 40/46 (86.96%), Query Frame = 1 
Query:    4 AYKYIPYGKVGETIPYLLRRAQENSAMLGGASHERGLLVKEIRRRI 141
            AYKY+PYG+V E +PYL+RRAQENS ++ GA HERGLL+KEI +RI
Sbjct:  526 AYKYLPYGQVHEVLPYLIRRAQENSGLMAGAVHERGLLLKEITQRI 571
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BLAST of mRNA_H-canaliculatus_M_contigs75046.1.1 vs.
Match: Proline (dehydrogenase n=4 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SR17_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 1.350e-13
Identity = 32/46 (69.57%), Postives = 38/46 (82.61%), Query Frame = 1 
Query:    4 AYKYIPYGKVGETIPYLLRRAQENSAMLGGASHERGLLVKEIRRRI 141
            AYKY+PYGKV E +PYL+RRAQENS ++ GA HER LL  EI+RRI
Sbjct:  539 AYKYLPYGKVEEVLPYLIRRAQENSGLMAGAVHERNLLKNEIKRRI 584
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BLAST of mRNA_H-canaliculatus_M_contigs75046.1.1 vs.
Match: Proline (dehydrogenase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UPP5_SALR5)

HSP 1 Score: 70.9 bits (172), Expect = 4.720e-13
Identity = 31/47 (65.96%), Postives = 38/47 (80.85%), Query Frame = 1 
Query:    1 QAYKYIPYGKVGETIPYLLRRAQENSAMLGGASHERGLLVKEIRRRI 141
            +AYKY+PYG V E +PYL+RRA ENS MLGGASHE  ++  EI+RRI
Sbjct:  588 KAYKYVPYGPVNEVMPYLIRRAHENSGMLGGASHELTMISNEIKRRI 634
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BLAST of mRNA_H-canaliculatus_M_contigs75046.1.1 vs.
Match: Proline (dehydrogenase n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137PJ88_CONC2)

HSP 1 Score: 70.5 bits (171), Expect = 6.450e-13
Identity = 31/48 (64.58%), Postives = 39/48 (81.25%), Query Frame = 1 
Query:    4 AYKYIPYGKVGETIPYLLRRAQENSAMLGGASHERGLLVKEIRRRIFG 147
            AYKYIPYG V E +PYL+RRAQENSA+L G + E+ LL+ EI+ R+FG
Sbjct:  559 AYKYIPYGPVAEVMPYLIRRAQENSAVLTGVTREQDLLIAEIKSRLFG 606
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BLAST of mRNA_H-canaliculatus_M_contigs75046.1.1 vs.
Match: Proline (dehydrogenase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BAV2_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 7.850e-13
Identity = 28/49 (57.14%), Postives = 39/49 (79.59%), Query Frame = 1 
Query:    1 QAYKYIPYGKVGETIPYLLRRAQENSAMLGGASHERGLLVKEIRRRIFG 147
            +AYKY+PYG V E +PYL+RRAQENS +LGG + +R +L++E+R R  G
Sbjct:  139 KAYKYVPYGPVSEVLPYLIRRAQENSDLLGGVAQQRSMLLEELRSRAAG 187
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BLAST of mRNA_H-canaliculatus_M_contigs75046.1.1 vs.
Match: Proline (dehydrogenase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CG77_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.220e-12
Identity = 31/49 (63.27%), Postives = 39/49 (79.59%), Query Frame = 1 
Query:    1 QAYKYIPYGKVGETIPYLLRRAQENSAMLGGASHERGLLVKEIRRRIFG 147
            +AYKY+PYG VGE +PYLLRRAQENS++LG  + E  +L +EI RR FG
Sbjct:  275 KAYKYVPYGAVGEVMPYLLRRAQENSSLLGSVAMETRMLRQEITRRAFG 323
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BLAST of mRNA_H-canaliculatus_M_contigs75046.1.1 vs.
Match: Proline (dehydrogenase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKB9_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 3.080e-12
Identity = 28/48 (58.33%), Postives = 39/48 (81.25%), Query Frame = 1 
Query:    1 QAYKYIPYGKVGETIPYLLRRAQENSAMLGGASHERGLLVKEIRRRIF 144
            +AYKY+PYG VG+ +PYL+RRAQENS ++GG  HE+GL+  E+ RR+ 
Sbjct:  550 KAYKYVPYGLVGQVLPYLIRRAQENSDVMGGVKHEQGLIRAELWRRML 597
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs75046.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Proline6.190e-2393.88dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID... [more]
Proline6.190e-2393.88dehydrogenase n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
Proline2.640e-1668.75dehydrogenase n=1 Tax=Tribonema minus TaxID=303371... [more]
Proline5.310e-1469.57dehydrogenase n=1 Tax=Hondaea fermentalgiana TaxID... [more]
Proline1.350e-1369.57dehydrogenase n=4 Tax=labyrinthulid quahog parasit... [more]
Proline4.720e-1365.96dehydrogenase n=1 Tax=Salpingoeca rosetta (strain ... [more]
Proline6.450e-1364.58dehydrogenase n=1 Tax=Conidiobolus coronatus (stra... [more]
Proline7.850e-1357.14dehydrogenase n=1 Tax=Dictyocha speculum TaxID=356... [more]
Proline1.220e-1263.27dehydrogenase n=1 Tax=Florenciella parvula TaxID=2... [more]
Proline3.080e-1258.33dehydrogenase n=2 Tax=Monodopsidaceae TaxID=425072... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs75046contigH-canaliculatus_M_contigs75046:36..185 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FU94
PFAMsEF-hand_5,Pro_dh
Model size150
Max annot lvl2759|Eukaryota
KEGG rclassRC00083
KEGG koko:K00318
KEGG ReactionR10507
KEGG Pathwayko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Evalue1.01e-23
EggNOG OGsCOG0506@1|root,KOG0186@2759|Eukaryota
Descriptionproline dehydrogenase activity
Cds size150
COG categoryE
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854088.3443542-CDS-H-canaliculatus_M_contigs75046:35..1851696854088.3443542-CDS-H-canaliculatus_M_contigs75046:35..185Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs75046 36..185 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs75046.1.1prot_H-canaliculatus_M_contigs75046.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs75046 36..185 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs75046.1.1

>prot_H-canaliculatus_M_contigs75046.1.1 ID=prot_H-canaliculatus_M_contigs75046.1.1|Name=mRNA_H-canaliculatus_M_contigs75046.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=50bp
QAYKYIPYGKVGETIPYLLRRAQENSAMLGGASHERGLLVKEIRRRIFG*
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mRNA from alignment at H-canaliculatus_M_contigs75046:36..185+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs75046.1.1 ID=mRNA_H-canaliculatus_M_contigs75046.1.1|Name=mRNA_H-canaliculatus_M_contigs75046.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=150bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75046:36..185+ (Hapterophycus canaliculatus Oshoro7m male)
CAGGCATACAAGTACATCCCTTATGGAAAGGTTGGAGAGACGATCCCTTA
CCTCCTGCGCAGGGCCCAGGAGAATAGCGCCATGCTCGGCGGGGCCAGCC
ACGAGCGCGGCCTCCTCGTCAAGGAAATCCGCCGCCGCATCTTCGGGTGA
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs75046:36..185+

>mRNA_H-canaliculatus_M_contigs75046.1.1 ID=mRNA_H-canaliculatus_M_contigs75046.1.1|Name=mRNA_H-canaliculatus_M_contigs75046.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=150bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75046:36..185+ (Hapterophycus canaliculatus Oshoro7m male)
CAGGCATACAAGTACATCCCTTATGGAAAGGTTGGAGAGACGATCCCTTA
CCTCCTGCGCAGGGCCCAGGAGAATAGCGCCATGCTCGGCGGGGCCAGCC
ACGAGCGCGGCCTCCTCGTCAAGGAAATCCGCCGCCGCATCTTCGGGTGA
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