mRNA_H-canaliculatus_M_contigs75007.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs75007.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=A0A0J8B0I3_BETVV) HSP 1 Score: 153 bits (387), Expect = 1.540e-44 Identity = 81/138 (58.70%), Postives = 98/138 (71.01%), Query Frame = 1
Query: 52 RDYRITKAYFRTCSTYGSRSQAHFYLYALRLIADQTECTFALLRYSLGGDRPSQTARLTLSFAPLQGIKVRIKI*PGWYFNNGSEHTSVRTSKPPSYPTQIISQPNSSLQ*RFTGSFRLAAGMWHLHHNYNFTGSVVE 465
RD+RITKA FR CS + +RSQA FYLYA IA++ E TFALLRY LGGDRP+QTA L LS G++++ + GW F +GS S PP+Y T + S+PN+ LQ RFTGSFRLAAGM HLH NYNFT S+VE
Sbjct: 6 RDHRITKADFRPCSPHRARSQAPFYLYARCPIANRAEGTFALLRYLLGGDRPNQTAHLALSLRSRDGVRIQTQ--QGWCFIDGSPGAETPGSMPPTYTTHVGSKPNTKLQLRFTGSFRLAAGMSHLHDNYNFTESLVE 141
BLAST of mRNA_H-canaliculatus_M_contigs75007.1.1 vs.
Match: Cell (wall-associated hydrolase n=1 Tax=Geobacillus sp. BCO2 TaxID=1547578 RepID=A0A0N0I3T1_9BACI) HSP 1 Score: 129 bits (325), Expect = 1.120e-34 Identity = 70/127 (55.12%), Postives = 86/127 (67.72%), Query Frame = 1
Query: 1 ACYPRSTFYLMSDNPSIRDYRITKAYFRTCSTYGSRSQAHFYLYALRLIADQTECTFALLRYSLGGDRPSQTARLTLSFAPLQGIKVRIKI*PGWYFNNGSEHTSVRTSKPPSYPTQIISQPNSSLQ 381
ACYPR +FY +SD PS+R++RITK FR CST SRSQA L LR+I++ +E TF LRY LGGDRPSQTARLTLS PL+ ++VRI I PGWY S S+ P+YP Q I + + LQ
Sbjct: 100 ACYPRGSFYPLSDGPSMRNHRITKPDFRPCSTCPSRSQAPLCLCTLRMISNHSEGTFGRLRYLLGGDRPSQTARLTLSPTPLR-VRVRISIPPGWYPTAASTEAGAPASQAPTYPVQAIPKFHIRLQ 225
BLAST of mRNA_H-canaliculatus_M_contigs75007.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Amblyomma maculatum TaxID=34609 RepID=G3MSX4_AMBMU) HSP 1 Score: 123 bits (309), Expect = 5.940e-34 Identity = 60/78 (76.92%), Postives = 65/78 (83.33%), Query Frame = 1
Query: 1 ACYPRSTFYLMSDNPSIRDYRITKAYFRTCSTYGSRSQAHFYLYALRLIADQTECTFALLRYSLGGDRPSQTARLTLS 234
ACYPRSTFY +SD PSIRD+RITK YFRTCS+ SRSQAHF LY L I+D+TECTF LLRYSLGGDRPSQT TLS
Sbjct: 8 ACYPRSTFYPLSDGPSIRDHRITKTYFRTCSSRHSRSQAHFCLYTLGTISDRTECTFVLLRYSLGGDRPSQTTNHTLS 85
BLAST of mRNA_H-canaliculatus_M_contigs75007.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=uncultured bacterium TaxID=77133 RepID=A0A1B2YRG6_9BACT) HSP 1 Score: 123 bits (308), Expect = 3.290e-33 Identity = 66/126 (52.38%), Postives = 80/126 (63.49%), Query Frame = 1
Query: 1 ACYPRSTFYLMSDNPSIRDYRITKAYFRTCSTYGSRSQAHFYLYALRLIADQTECTFALLRYSLGGDRPSQTARLTLSFAPLQGIKVRIKI*PGWYFNNGSEHTSVRTSKPPSYPTQIISQPNSSL 378
ACYPRSTFY +SD PS+R++RIT +YFRTCST S SQA Y YALR + ++TE TF LRYS GGD PSQT L I VR+ + GWYF + S S SK P+YP I + N+ L
Sbjct: 15 ACYPRSTFYPLSDGPSMRNHRITMSYFRTCSTCKSCSQAPLYHYALRTVTNRTEGTFESLRYSFGGDHPSQTTHHALF-----PIGVRLSVYKGWYFKDDSTQPSGHASKSPTYPAHHILKINAKL 135
BLAST of mRNA_H-canaliculatus_M_contigs75007.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L145_LUPAL) HSP 1 Score: 119 bits (298), Expect = 8.830e-31 Identity = 61/95 (64.21%), Postives = 71/95 (74.74%), Query Frame = 1
Query: 1 ACYPRSTFYLMSDNPSIRDYRITKAYFRTCSTYGSRSQAHFYLYALRLIADQTECTFALLRYSLGGDRPSQTARLTLSFAPLQGIKVRIKI*PGW 285
ACYPRSTFY +SD PSI+++RITK YFRTCST SRSQA F LY LR I+D++E TF LLRYSLGGDRPSQTA TLS + + I + GW
Sbjct: 8 ACYPRSTFYPLSDGPSIQNHRITKTYFRTCSTCLSRSQARFCLYTLRPISDRSERTFVLLRYSLGGDRPSQTAHHTLSSIRMTDQTISISLSLGW 102
BLAST of mRNA_H-canaliculatus_M_contigs75007.1.1 vs.
Match: Uncharacterized (protein n=4 Tax=Pseudomonas syringae group TaxID=136849 RepID=A0A0N8SDS7_PSESH) HSP 1 Score: 113 bits (283), Expect = 7.190e-30 Identity = 57/78 (73.08%), Postives = 64/78 (82.05%), Query Frame = 1
Query: 1 ACYPRSTFYLMSDNPSIRDYRITKAYFRTCSTYGSRSQAHFYLYALRLIADQTECTFALLRYSLGGDRPSQTARLTLS 234
ACYPRSTFY +SD PSI+++RITK YFRTCST SRSQA F LY LR I+D++E TF LLRYSLGGDRPSQT TLS
Sbjct: 15 ACYPRSTFYPLSDGPSIQNHRITKTYFRTCSTCLSRSQARFCLYTLRPISDRSERTFVLLRYSLGGDRPSQTTHHTLS 92
BLAST of mRNA_H-canaliculatus_M_contigs75007.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Legionella quinlivanii TaxID=45073 RepID=A0A0W0XYZ0_9GAMM) HSP 1 Score: 112 bits (281), Expect = 1.770e-29 Identity = 59/79 (74.68%), Postives = 64/79 (81.01%), Query Frame = -2
Query: 4 GKGQCQSGSLTGAVSSQRVTEECKGTLSLVGNQT*SVKVKVCLTARPISRAGTKVGLSDPVIPNGRVIAHQIKGTPGIT 240
G+GQC GSLTGAVSSQRVTEE KGTL VG++T SVK K CLTAR RAGTKVGLSDPV+ GR IA +IKGTPGIT
Sbjct: 28 GRGQCMVGSLTGAVSSQRVTEEHKGTLGTVGHRTKSVKAKGCLTARRTCRAGTKVGLSDPVVLYGRAIAQRIKGTPGIT 106
BLAST of mRNA_H-canaliculatus_M_contigs75007.1.1 vs.
Match: Hipothetical (protein n=1 Tax=Anopheles darlingi TaxID=43151 RepID=A0A2M4CSR9_ANODA) HSP 1 Score: 110 bits (276), Expect = 3.200e-28 Identity = 61/126 (48.41%), Postives = 71/126 (56.35%), Query Frame = 1
Query: 1 ACYPRSTFYLMSDNPSIRDYRITKAYFRTCSTYGSRSQAHFYLYALRLIADQTECTFALLRYSLGGDRPSQTARLTLSFAPLQGIKVRIKI*PGWYFNNGSEHTSVRTSKPPSYPTQIISQPNSSL 378
ACYPR TFY +SD + +IT FR CST S SQA Y Y LI +Q E TF LRY+LGG+RPSQT LS + G R P WYFNN S TS S+ P+YPTQ N+ L
Sbjct: 22 ACYPRGTFYPLSDTTTTSKRQITSPNFRPCSTSHSHSQAPLYTYTQHLITNQNEGTFGRLRYNLGGNRPSQTTHQALSPTQIMGQGSRGAERPEWYFNNNSTTTSGTASQSPTYPTQTEPNTNTKL 147
BLAST of mRNA_H-canaliculatus_M_contigs75007.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=uncultured Pseudomonadales bacterium HF0010_05E14 TaxID=710778 RepID=E0XWS9_9GAMM) HSP 1 Score: 107 bits (268), Expect = 6.430e-28 Identity = 57/72 (79.17%), Postives = 61/72 (84.72%), Query Frame = -2
Query: 4 GSLTGAVSSQRVTEECKGTLSLVGNQT*SVKVKVCLTARPISRAGTKVGLSDPVIPNGRVIAHQIKGTPGIT 219
GSLTGAVSSQRVTEE +GTLS+VGN S KVKVCLTAR SRAGTKVGLSDPV+ GR IA +IKGTPGIT
Sbjct: 2 GSLTGAVSSQRVTEEREGTLSMVGNHAMSAKVKVCLTARLTSRAGTKVGLSDPVVLYGRAIAQRIKGTPGIT 73
BLAST of mRNA_H-canaliculatus_M_contigs75007.1.1 vs.
Match: Hypothetical (CTC00065, TC0129 n=1 Tax=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) TaxID=272624 RepID=Q5ZY04_LEGPH) HSP 1 Score: 107 bits (266), Expect = 2.210e-27 Identity = 54/84 (64.29%), Postives = 65/84 (77.38%), Query Frame = 1
Query: 1 ACYPRSTFYLMSDNPSIRDYRITKAYFRTCSTYGSRSQAHFYLYALRLIADQTECTFALLRYSLGGDRPSQTARLTLSFAPLQG 252
ACYPRSTFY +SD PSI+++RITK FR+CS+ SRSQA F LY L ++D+TE TF LLRYSLGGDRPSQT TLS + + G
Sbjct: 8 ACYPRSTFYPLSDGPSIQNHRITKTNFRSCSSRHSRSQAPFCLYTLGTMSDRTEGTFVLLRYSLGGDRPSQTTHHTLSSSRITG 91 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs75007.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs75007.1.1 >prot_H-canaliculatus_M_contigs75007.1.1 ID=prot_H-canaliculatus_M_contigs75007.1.1|Name=mRNA_H-canaliculatus_M_contigs75007.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=82bp MSDNPSIRDYRITKAYFRTCSTYGSRSQAHFYLYALRLIADQTECTFALLback to top mRNA from alignment at H-canaliculatus_M_contigs75007:1..466- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs75007.1.1 ID=mRNA_H-canaliculatus_M_contigs75007.1.1|Name=mRNA_H-canaliculatus_M_contigs75007.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=466bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75007:1..466- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs75007:1..466- >mRNA_H-canaliculatus_M_contigs75007.1.1 ID=mRNA_H-canaliculatus_M_contigs75007.1.1|Name=mRNA_H-canaliculatus_M_contigs75007.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=246bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75007:1..466- (Hapterophycus canaliculatus Oshoro7m male)back to top |