mRNA_H-canaliculatus_M_contigs74954.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs74954.1.1
Unique NamemRNA_H-canaliculatus_M_contigs74954.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs74954.1.1 vs.
Match: Caltractin (n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NME6_PHYIT)

HSP 1 Score: 61.6 bits (148), Expect = 2.770e-11
Identity = 32/36 (88.89%), Postives = 32/36 (88.89%), Query Frame = 1 
Query:    4 ARRTPTKRAAKTYERPGLSEEEIEEIREAFNLFDTD 111
            ARR   KR AKTYERPGLSEEEIEEIREAFNLFDTD
Sbjct:    2 ARRISQKRNAKTYERPGLSEEEIEEIREAFNLFDTD 37
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BLAST of mRNA_H-canaliculatus_M_contigs74954.1.1 vs.
Match: Uncharacterized (protein n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0A662XQ59_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 1.420e-10
Identity = 31/36 (86.11%), Postives = 32/36 (88.89%), Query Frame = 1 
Query:    4 ARRTPTKRAAKTYERPGLSEEEIEEIREAFNLFDTD 111
            ARR   KR AKTYERPGLSEEE+EEIREAFNLFDTD
Sbjct:    2 ARRISQKRNAKTYERPGLSEEEVEEIREAFNLFDTD 37
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BLAST of mRNA_H-canaliculatus_M_contigs74954.1.1 vs.
Match: Calcium-dependent (protein 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPT7_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 1.500e-10
Identity = 33/36 (91.67%), Postives = 33/36 (91.67%), Query Frame = 1 
Query:    7 RRTPT-KRAAKTYERPGLSEEEIEEIREAFNLFDTD 111
            RR P  KRAAKTYERPGLSEEEIEEIREAFNLFDTD
Sbjct:    8 RRAPQGKRAAKTYERPGLSEEEIEEIREAFNLFDTD 43
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BLAST of mRNA_H-canaliculatus_M_contigs74954.1.1 vs.
Match: EF-hand (domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UTK0_9ARCH)

HSP 1 Score: 57.8 bits (138), Expect = 3.670e-10
Identity = 28/34 (82.35%), Postives = 31/34 (91.18%), Query Frame = 1 
Query:   10 RTPTKRAAKTYERPGLSEEEIEEIREAFNLFDTD 111
            +T +KR  K+YERPGLSEEEIEEIREAFNLFDTD
Sbjct:   12 KTASKRPTKSYERPGLSEEEIEEIREAFNLFDTD 45
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BLAST of mRNA_H-canaliculatus_M_contigs74954.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XJ11_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 4.750e-10
Identity = 32/36 (88.89%), Postives = 32/36 (88.89%), Query Frame = 1 
Query:    4 ARRTPTKRAAKTYERPGLSEEEIEEIREAFNLFDTD 111
            ARR   KR AKTYERPGLSEEEIEEIREAFNLFDTD
Sbjct:  310 ARRISQKRNAKTYERPGLSEEEIEEIREAFNLFDTD 345
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BLAST of mRNA_H-canaliculatus_M_contigs74954.1.1 vs.
Match: Aste57867_11335 (protein n=36 Tax=Stramenopiles TaxID=33634 RepID=A0A485KUJ5_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 7.720e-10
Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 1 
Query:   22 KRAAKTYERPGLSEEEIEEIREAFNLFDTD 111
            KRA+KTYERPGLSEEEIEEIREAFNLFDTD
Sbjct:   10 KRASKTYERPGLSEEEIEEIREAFNLFDTD 39
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BLAST of mRNA_H-canaliculatus_M_contigs74954.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DX40_BRELC)

HSP 1 Score: 56.6 bits (135), Expect = 2.450e-9
Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = 1 
Query:    4 ARRTPTKRAAKTYERPGLSEEEIEEIREAFNLFDTD 111
            ARR   KR  KTYERPGLS+EE+EEIR+AFNLFDTD
Sbjct:    2 ARRLSQKRNVKTYERPGLSDEELEEIRKAFNLFDTD 37
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BLAST of mRNA_H-canaliculatus_M_contigs74954.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CLJ5_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 2.810e-9
Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 1 
Query:   22 KRAAKTYERPGLSEEEIEEIREAFNLFDTD 111
            KRA+KTYERPGLSEEEIEEIREAFNLFDTD
Sbjct:   10 KRASKTYERPGLSEEEIEEIREAFNLFDTD 39
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BLAST of mRNA_H-canaliculatus_M_contigs74954.1.1 vs.
Match: Hypothetical (protein n=3 Tax=Ochrophyta TaxID=2696291 RepID=A0A7S2UVW5_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 2.830e-9
Identity = 31/35 (88.57%), Postives = 32/35 (91.43%), Query Frame = 1 
Query:    7 RRTPTKRAAKTYERPGLSEEEIEEIREAFNLFDTD 111
            RRTP +R  KTYERPGLSEEEIEEIREAFNLFDTD
Sbjct:    2 RRTP-QRNKKTYERPGLSEEEIEEIREAFNLFDTD 35
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BLAST of mRNA_H-canaliculatus_M_contigs74954.1.1 vs.
Match: Target (of rapamycin complex subunit LST8 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YV47_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 4.250e-9
Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 1 
Query:   22 KRAAKTYERPGLSEEEIEEIREAFNLFDTD 111
            KR AKTYERPGLSEEEIEEIREAFNLFDTD
Sbjct:   12 KRGAKTYERPGLSEEEIEEIREAFNLFDTD 41
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs74954.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Caltractin2.770e-1188.89n=1 Tax=Phytophthora infestans (strain T30-4) TaxI... [more]
Uncharacterized1.420e-1086.11protein n=3 Tax=Peronosporaceae TaxID=4777 RepID=A... [more]
Calcium-dependent1.500e-1091.67protein 4 n=1 Tax=Tribonema minus TaxID=303371 Rep... [more]
EF-hand3.670e-1082.35domain-containing protein n=1 Tax=archaeon TaxID=1... [more]
Uncharacterized4.750e-1088.89protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID... [more]
Aste57867_113357.720e-1096.67protein n=36 Tax=Stramenopiles TaxID=33634 RepID=A... [more]
Uncharacterized2.450e-977.78protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A... [more]
Uncharacterized2.810e-996.67protein n=2 Tax=Aphanomyces astaci TaxID=112090 Re... [more]
Hypothetical2.830e-988.57protein n=3 Tax=Ochrophyta TaxID=2696291 RepID=A0A... [more]
Target4.250e-996.67of rapamycin complex subunit LST8 n=1 Tax=Thrausto... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs74954contigH-canaliculatus_M_contigs74954:6..116 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog44056.XP_009035920.1
Preferred nameCEN2
PFAMsEF-hand_1,EF-hand_5,EF-hand_6,EF-hand_7,EF-hand_8
Model size111
Max annot lvl2759|Eukaryota
KEGG koko:K16465,ko:K16466
KEGG TC1.I.1
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0000086,GO:0000109,GO:0000226,GO:0000278,GO:0000715,GO:0003674,GO:0005488,GO:0005509,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005813,GO:0005814,GO:0005815,GO:0005829,GO:0005856,GO:0006139,GO:0006259,GO:0006281,GO:0006289,GO:0006294,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007098,GO:0007099,GO:0007346,GO:0008150,GO:0008152,GO:0009987,GO:0010389,GO:0010564,GO:0015630,GO:0016043,GO:0022402,GO:0022406,GO:0022607,GO:0030030,GO:0030031,GO:0031023,GO:0031974,GO:0031981,GO:0032465,GO:0032991,GO:0033554,GO:0034622,GO:0034641,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044450,GO:0044464,GO:0044770,GO:0044772,GO:0044782,GO:0044839,GO:0046483,GO:0046872,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051276,GO:0051298,GO:0051302,GO:0051640,GO:0051641,GO:0051716,GO:0051726,GO:0060271,GO:0065003,GO:0065004,GO:0065007,GO:0070013,GO:0070911,GO:0070925,GO:0071704,GO:0071824,GO:0071840,GO:0071942,GO:0090304,GO:0097711,GO:0098534,GO:0120031,GO:0120036,GO:0140056,GO:1901360,GO:1901987,GO:1901990,GO:1902749,GO:1903047,GO:1990391
Exons1
Evalue4.96e-12
EggNOG OGsCOG5126@1|root,KOG0028@2759|Eukaryota
Descriptioncalcium ion binding
Cds size111
COG categoryDTZ
BRITEko00000,ko03019,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854087.121505-CDS-H-canaliculatus_M_contigs74954:5..1161696854087.121505-CDS-H-canaliculatus_M_contigs74954:5..116Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs74954 6..116 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs74954.1.1prot_H-canaliculatus_M_contigs74954.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs74954 6..116 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs74954.1.1

>prot_H-canaliculatus_M_contigs74954.1.1 ID=prot_H-canaliculatus_M_contigs74954.1.1|Name=mRNA_H-canaliculatus_M_contigs74954.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=37bp
QARRTPTKRAAKTYERPGLSEEEIEEIREAFNLFDTD
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mRNA from alignment at H-canaliculatus_M_contigs74954:6..116-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs74954.1.1 ID=mRNA_H-canaliculatus_M_contigs74954.1.1|Name=mRNA_H-canaliculatus_M_contigs74954.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=111bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs74954:6..116- (Hapterophycus canaliculatus Oshoro7m male)
CAGGCGCGCCGAACCCCCACGAAGCGAGCGGCGAAGACGTACGAGCGACC
AGGGCTGTCGGAGGAGGAGATCGAGGAGATCCGCGAGGCCTTCAACCTCT
TCGACACCGAC
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs74954:6..116-

>mRNA_H-canaliculatus_M_contigs74954.1.1 ID=mRNA_H-canaliculatus_M_contigs74954.1.1|Name=mRNA_H-canaliculatus_M_contigs74954.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=111bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs74954:6..116- (Hapterophycus canaliculatus Oshoro7m male)
CAGGCGCGCCGAACCCCCACGAAGCGAGCGGCGAAGACGTACGAGCGACC
AGGGCTGTCGGAGGAGGAGATCGAGGAGATCCGCGAGGCCTTCAACCTCT
TCGACACCGAC
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