mRNA_H-canaliculatus_M_contigs74949.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs74949.1.1
Unique NamemRNA_H-canaliculatus_M_contigs74949.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs74949.1.1 vs.
Match: ABC (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L581_9PHAE)

HSP 1 Score: 187 bits (474), Expect = 4.900e-53
Identity = 88/93 (94.62%), Postives = 92/93 (98.92%), Query Frame = 1 
Query:    1 YYELAAASLRFKFPNPGPLDGITSTTKNILTMRDCTYQYPGSARPQIQDASLKLCLASRVGVTGVNGAGKTTLIKMVVRETEPQSGEVWSHHN 279
            YYEL+AASLRFKFPNPGPLDGITSTTKNILTM+DC++QYPGSARPQIQ ASLKLCLASRVGVTGVNGAGKTTLIKMVVRETEPQSGEVWSHHN
Sbjct:  911 YYELSAASLRFKFPNPGPLDGITSTTKNILTMKDCSFQYPGSARPQIQSASLKLCLASRVGVTGVNGAGKTTLIKMVVRETEPQSGEVWSHHN 1003
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BLAST of mRNA_H-canaliculatus_M_contigs74949.1.1 vs.
Match: P-loop (containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGS6_9STRA)

HSP 1 Score: 154 bits (390), Expect = 1.030e-41
Identity = 70/93 (75.27%), Postives = 83/93 (89.25%), Query Frame = 1 
Query:    1 YYELAAASLRFKFPNPGPLDGITSTTKNILTMRDCTYQYPGSARPQIQDASLKLCLASRVGVTGVNGAGKTTLIKMVVRETEPQSGEVWSHHN 279
            YYEL AA+LRFKFP+PGPLDGI STTK+ILTM + TY YPG+ +P + +ASLKLCLASRV VTGVNGAGKTTLI++VVRE+EP SGE+W+HHN
Sbjct:  665 YYELDAATLRFKFPDPGPLDGINSTTKSILTMNNATYTYPGADKPTLAEASLKLCLASRVAVTGVNGAGKTTLIRLVVRESEPDSGEIWAHHN 757
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BLAST of mRNA_H-canaliculatus_M_contigs74949.1.1 vs.
Match: Uncharacterized (protein (Fragment) n=10 Tax=Aphanomyces TaxID=100860 RepID=A0A3R6WRG8_9STRA)

HSP 1 Score: 141 bits (356), Expect = 3.980e-37
Identity = 62/93 (66.67%), Postives = 77/93 (82.80%), Query Frame = 1 
Query:    1 YYELAAASLRFKFPNPGPLDGITSTTKNILTMRDCTYQYPGSARPQIQDASLKLCLASRVGVTGVNGAGKTTLIKMVVRETEPQSGEVWSHHN 279
            YYELAA+  +F FP PG LDGITSTT+ IL+M +C+Y YPG+A+PQ+ D ++KLCLASRV V G NGAGK+TLIKM+V+ET P SGE+W HHN
Sbjct:  932 YYELAASDCQFIFPQPGRLDGITSTTRRILSMENCSYTYPGAAKPQLHDVNIKLCLASRVAVIGANGAGKSTLIKMLVQETSPDSGEMWKHHN 1024
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BLAST of mRNA_H-canaliculatus_M_contigs74949.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XBF7_GLOUD)

HSP 1 Score: 133 bits (335), Expect = 2.700e-34
Identity = 60/93 (64.52%), Postives = 72/93 (77.42%), Query Frame = 1 
Query:    1 YYELAAASLRFKFPNPGPLDGITSTTKNILTMRDCTYQYPGSARPQIQDASLKLCLASRVGVTGVNGAGKTTLIKMVVRETEPQSGEVWSHHN 279
            YYEL ++   F  P PG L+GI STT+ ILTM  CTY YPG+A+PQ+ D S+KLCLASRV V G NGAGK+TLIKM+V+ET P SGE+W HHN
Sbjct:  746 YYELKSSDTVFHLPQPGRLEGINSTTRRILTMDHCTYTYPGAAKPQLVDVSIKLCLASRVAVIGANGAGKSTLIKMLVQETAPDSGEMWKHHN 838
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BLAST of mRNA_H-canaliculatus_M_contigs74949.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WQX4_9STRA)

HSP 1 Score: 130 bits (328), Expect = 2.380e-33
Identity = 58/93 (62.37%), Postives = 72/93 (77.42%), Query Frame = 1 
Query:    1 YYELAAASLRFKFPNPGPLDGITSTTKNILTMRDCTYQYPGSARPQIQDASLKLCLASRVGVTGVNGAGKTTLIKMVVRETEPQSGEVWSHHN 279
            YYEL ++   F  P PG L+GITSTT+ ILTM +CT+ YPG+ +PQ+ D S+KLCLASRV V GVNGAGK+TLIKM+V+ET P +G  W HHN
Sbjct:  732 YYELKSSDTVFHLPQPGRLEGITSTTRRILTMDNCTFTYPGATKPQLSDVSVKLCLASRVAVIGVNGAGKSTLIKMLVQETAPDTGTFWKHHN 824
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BLAST of mRNA_H-canaliculatus_M_contigs74949.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XTS4_9STRA)

HSP 1 Score: 128 bits (322), Expect = 1.530e-32
Identity = 59/94 (62.77%), Postives = 73/94 (77.66%), Query Frame = 1 
Query:    1 YYELAAASLRFKFPNPGPLDGITSTTKNILTMRDCTYQYPGSARPQIQDASLKLCLASRVGVTGVNGAGKTTLIKMVVRETEPQS-GEVWSHHN 279
            YYEL+A+  +F FP PG LDGITSTT+ IL+M    Y YPG+++PQ+ D S+KLCLASRV V G NGAGK+TLIKM+V+ET P   GE+W HHN
Sbjct:  736 YYELSASDTQFIFPQPGRLDGITSTTRRILSMEHVNYTYPGASKPQLIDVSVKLCLASRVAVIGANGAGKSTLIKMIVQETSPDGEGEMWKHHN 829
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BLAST of mRNA_H-canaliculatus_M_contigs74949.1.1 vs.
Match: Aste57867_3234 (protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KBP9_9STRA)

HSP 1 Score: 127 bits (320), Expect = 2.860e-32
Identity = 57/94 (60.64%), Postives = 74/94 (78.72%), Query Frame = 1 
Query:    1 YYELAAASLRFKFPNPGPLDGITSTTKNILTMRDCTYQYPGSARPQIQDASLKLCLASRVGVTGVNGAGKTTLIKMVVRETEPQ-SGEVWSHHN 279
            YYEL+A+   F FP PG LDGITSTT+ IL++  C + YPG+++PQ+ D S+KLCLASR+ V G NGAGK+TLIKM+V+ET P  +GE+W HHN
Sbjct:  733 YYELSASDTHFVFPQPGRLDGITSTTRRILSIDHCNFTYPGASKPQLVDVSVKLCLASRIAVIGGNGAGKSTLIKMIVQETNPDDNGEMWKHHN 826
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BLAST of mRNA_H-canaliculatus_M_contigs74949.1.1 vs.
Match: Elongation (factor 3 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZQJ5_9STRA)

HSP 1 Score: 127 bits (320), Expect = 2.870e-32
Identity = 54/93 (58.06%), Postives = 73/93 (78.49%), Query Frame = 1 
Query:    1 YYELAAASLRFKFPNPGPLDGITSTTKNILTMRDCTYQYPGSARPQIQDASLKLCLASRVGVTGVNGAGKTTLIKMVVRETEPQSGEVWSHHN 279
            YYELA+   +F  P PG L+GI+STT+ IL++  C Y YPG+++PQ+ D S+KLCLASRV V G NGAGK+TLIKM+V++T+P +G+ W HHN
Sbjct: 1062 YYELASTDTQFILPQPGRLEGISSTTRRILSIEHCDYTYPGASKPQLVDVSVKLCLASRVAVIGANGAGKSTLIKMIVQDTQPDNGDFWKHHN 1154
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs74949.1.1 vs.
Match: Elongation (factor 3, putative (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C5V3_PYTIN)

HSP 1 Score: 125 bits (314), Expect = 1.840e-31
Identity = 57/100 (57.00%), Postives = 76/100 (76.00%), Query Frame = 1 
Query:    1 YYELAAASLRFKFPNPGPLDGITSTTKNILTMRDCTYQYPGSARPQIQDASLKL-------CLASRVGVTGVNGAGKTTLIKMVVRETEPQSGEVWSHHN 279
            YYELAA    F+ P PG L+GI+STT+ ILT+ +C++ YPG+A+PQ++D ++KL       CLASRV V G NGAGK+TLIKM+V+ET P +GE+W HHN
Sbjct:  739 YYELAATDTVFRLPPPGRLEGISSTTRRILTLTNCSFTYPGAAKPQLEDVNVKLRXVNVKLCLASRVAVIGANGAGKSTLIKMLVQETAPTTGEMWKHHN 838
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs74949.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C5T5_HYAAE)

HSP 1 Score: 125 bits (313), Expect = 2.510e-31
Identity = 54/92 (58.70%), Postives = 70/92 (76.09%), Query Frame = 1 
Query:    1 YYELAAASLRFKFPNPGPLDGITSTTKNILTMRDCTYQYPGSARPQIQDASLKLCLASRVGVTGVNGAGKTTLIKMVVRETEPQSGEVWSHH 276
            YYEL ++ + F  P PG L+GI S T+ ILT+ + TY YPG+ +PQ++D S+KLCLASRV V GVNGAGK+TLIKM+V+ET P +G  W HH
Sbjct:  731 YYELKSSDMVFNLPEPGRLEGINSMTRRILTLENATYSYPGATKPQLEDVSVKLCLASRVAVIGVNGAGKSTLIKMLVQETSPDTGTFWKHH 822
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs74949.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
ABC4.900e-5394.62protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5... [more]
P-loop1.030e-4175.27containing nucleoside triphosphate hydrolase prote... [more]
Uncharacterized3.980e-3766.67protein (Fragment) n=10 Tax=Aphanomyces TaxID=1008... [more]
Uncharacterized2.700e-3464.52protein n=1 Tax=Globisporangium ultimum (strain AT... [more]
Uncharacterized2.380e-3362.37protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID... [more]
Uncharacterized1.530e-3262.77protein n=1 Tax=Aphanomyces euteiches TaxID=100861... [more]
Aste57867_32342.860e-3260.64protein n=1 Tax=Aphanomyces stellatus TaxID=120398... [more]
Elongation2.870e-3258.06factor 3 n=1 Tax=Thraustotheca clavata TaxID=74557... [more]
Elongation1.840e-3157.00factor 3, putative (Fragment) n=1 Tax=Pythium insi... [more]
Uncharacterized2.510e-3158.70protein n=1 Tax=Hyaloperonospora arabidopsidis (st... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs74949contigH-canaliculatus_M_contigs74949:80..544 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7G7M2
PFAMsABC_tran,HEAT
Model size279
Max annot lvl2759|Eukaryota
KEGG koko:K03235
Hectar predicted targeting categoryother localisation
GOsGO:0000302,GO:0003674,GO:0005488,GO:0006417,GO:0006446,GO:0006448,GO:0006950,GO:0006979,GO:0007154,GO:0008150,GO:0009267,GO:0009268,GO:0009605,GO:0009628,GO:0009636,GO:0009719,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010243,GO:0010447,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0014070,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031667,GO:0031668,GO:0031669,GO:0032056,GO:0032058,GO:0032268,GO:0032270,GO:0033554,GO:0034198,GO:0034248,GO:0034250,GO:0034599,GO:0034614,GO:0035690,GO:0042221,GO:0042493,GO:0042542,GO:0042594,GO:0043021,GO:0043022,GO:0043555,GO:0043558,GO:0044877,GO:0045727,GO:0045948,GO:0046677,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051716,GO:0060255,GO:0060992,GO:0065007,GO:0070301,GO:0070887,GO:0071214,GO:0071236,GO:0071262,GO:0071264,GO:0071310,GO:0071407,GO:0071417,GO:0071467,GO:0071468,GO:0071495,GO:0071496,GO:0072755,GO:0080090,GO:0097237,GO:0104004,GO:1901561,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1990451,GO:1990928,GO:2000112
Exons2
Evalue3.16e-54
EggNOG OGsCOG0488@1|root,KOG1242@1|root,KOG0062@2759|Eukaryota,KOG1242@2759|Eukaryota
Descriptionprotein kinase regulator activity
Cds size279
COG categoryS
BRITEko00000,ko03012
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854087.0711076-CDS-H-canaliculatus_M_contigs74949:79..3401696854087.0711076-CDS-H-canaliculatus_M_contigs74949:79..340Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs74949 80..340 +
1696854087.08411-CDS-H-canaliculatus_M_contigs74949:526..5441696854087.08411-CDS-H-canaliculatus_M_contigs74949:526..544Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs74949 527..544 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs74949.1.1prot_H-canaliculatus_M_contigs74949.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs74949 80..544 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs74949.1.1

>prot_H-canaliculatus_M_contigs74949.1.1 ID=prot_H-canaliculatus_M_contigs74949.1.1|Name=mRNA_H-canaliculatus_M_contigs74949.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=93bp
YYELAAASLRFKFPNPGPLDGITSTTKNILTMRDCTYQYPGSARPQIQDA
SLKLCLASRVGVTGVNGAGKTTLIKMVVRETEPQSGEVWSHHN
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mRNA from alignment at H-canaliculatus_M_contigs74949:80..544+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs74949.1.1 ID=mRNA_H-canaliculatus_M_contigs74949.1.1|Name=mRNA_H-canaliculatus_M_contigs74949.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=465bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs74949:80..544+ (Hapterophycus canaliculatus Oshoro7m male)
TACTACGAGCTCGCGGCGGCATCGCTGCGCTTCAAGTTCCCCAACCCCGG
CCCCCTCGACGGGATCACCTCCACCACGAAGAACATCCTCACCATGCGGG
ACTGTACCTACCAGTACCCGGGGTCCGCGAGGCCGCAGATCCAGGACGCG
AGTCTCAAGCTGTGCCTGGCGTCGAGGGTGGGGGTGACGGGGGTTAACGG
AGCGGGAAAGACGACGCTGATCAAGATGGTCGTGAGGGAGACGGAGCCCC
AGAGCGGAGAGGTCAGTCCCGTTGTTTCGTGGGAGCGGCGGGTTTTCGTT
TTGGAGAACTTCCTGCGGGATGATTGGCCGGACGGAATCTCGGCGTTCCA
TTGCGGCGTGGAAGTTTACGTTGACCGTTGGAACACTCCATTTTTTGCTC
GATTACAAACGCAACCCCCCCCCTCCCCCCCTTGGACTGTGTTGCAGGTG
TGGTCCCACCACAAC
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs74949:80..544+

>mRNA_H-canaliculatus_M_contigs74949.1.1 ID=mRNA_H-canaliculatus_M_contigs74949.1.1|Name=mRNA_H-canaliculatus_M_contigs74949.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=279bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs74949:80..544+ (Hapterophycus canaliculatus Oshoro7m male)
TACTACGAGCTCGCGGCGGCATCGCTGCGCTTCAAGTTCCCCAACCCCGG
CCCCCTCGACGGGATCACCTCCACCACGAAGAACATCCTCACCATGCGGG
ACTGTACCTACCAGTACCCGGGGTCCGCGAGGCCGCAGATCCAGGACGCG
AGTCTCAAGCTGTGCCTGGCGTCGAGGGTGGGGGTGACGGGGGTTAACGG
AGCGGGAAAGACGACGCTGATCAAGATGGTCGTGAGGGAGACGGAGCCCC
AGAGCGGAGAGGTGTGGTCCCACCACAAC
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