mRNA_H-canaliculatus_M_contigs74930.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs74930.1.1
Unique NamemRNA_H-canaliculatus_M_contigs74930.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs74930.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGZ6_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 4.800e-16
Identity = 36/53 (67.92%), Postives = 44/53 (83.02%), Query Frame = 1 
Query:    7 QVRKGDMLCCEQALGHMDPAVFGPDARQFNPKRFVGNPDLKKKV---GQVTHE 156
            QV+KG++L  EQALG MDP+VFGPDAR+FNP+RFV NP+LKKKV   G V H+
Sbjct:  392 QVKKGELLMMEQALGQMDPSVFGPDAREFNPERFVDNPELKKKVFAYGYVDHD 444
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BLAST of mRNA_H-canaliculatus_M_contigs74930.1.1 vs.
Match: Cytochrome (P450 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQS9_ECTSI)

HSP 1 Score: 78.2 bits (191), Expect = 6.380e-16
Identity = 35/53 (66.04%), Postives = 44/53 (83.02%), Query Frame = 1 
Query:    7 QVRKGDMLCCEQALGHMDPAVFGPDARQFNPKRFVGNPDLKKKV---GQVTHE 156
            +V+KG++L  EQALG MDP+VFGPDAR+FNP+RFV NP+LKKKV   G V H+
Sbjct:  168 KVKKGELLMMEQALGQMDPSVFGPDAREFNPERFVDNPELKKKVFAYGYVDHD 220
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BLAST of mRNA_H-canaliculatus_M_contigs74930.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDN7_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 2.830e-14
Identity = 28/44 (63.64%), Postives = 39/44 (88.64%), Query Frame = 1 
Query:    7 QVRKGDMLCCEQALGHMDPAVFGPDARQFNPKRFVGNPDLKKKV 138
            +V+KGD+L C+QAL  MDP+VFGPDAR+F P+RFVGNP+ +K++
Sbjct:   14 KVKKGDVLLCKQALEQMDPSVFGPDAREFKPERFVGNPEPRKRM 57
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs74930.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAC4_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 4.040e-14
Identity = 31/44 (70.45%), Postives = 34/44 (77.27%), Query Frame = 1 
Query:    7 QVRKGDMLCCEQALGHMDPAVFGPDARQFNPKRFVGNPDLKKKV 138
            QVRKGDMLCC   L H+D AVFG DA +F PKRF+GNPDLK  V
Sbjct:  100 QVRKGDMLCCHHPLIHIDEAVFGADATEFKPKRFIGNPDLKDDV 143
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BLAST of mRNA_H-canaliculatus_M_contigs74930.1.1 vs.
Match: Epoxyalcohol (synthase CYP5164B1 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=A0A1L3HS58_ECTSI)

HSP 1 Score: 69.7 bits (169), Expect = 1.620e-12
Identity = 30/44 (68.18%), Postives = 33/44 (75.00%), Query Frame = 1 
Query:    7 QVRKGDMLCCEQALGHMDPAVFGPDARQFNPKRFVGNPDLKKKV 138
            QVRKGDMLCC   L H+D AVFG DA +F PKRF+GNP LK  V
Sbjct:  357 QVRKGDMLCCHHPLIHIDEAVFGADATEFKPKRFIGNPGLKDDV 400
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs74930.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
Uncharacterized4.800e-1667.92protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Cytochrome6.380e-1666.04P450 n=1 Tax=Ectocarpus siliculosus TaxID=2880 Rep... [more]
Uncharacterized2.830e-1463.64protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized4.040e-1470.45protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Epoxyalcohol1.620e-1268.18synthase CYP5164B1 n=2 Tax=Ectocarpus siliculosus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs74930contigH-canaliculatus_M_contigs74930:257..427 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog223192.XP_007911793.1
PFAMsp450
Model size171
Max annot lvl4751|Fungi
KEGG rclassRC00046
KEGG koko:K10437
KEGG ReactionR05487
KEGG Pathwayko00360,ko00643,ko01100,ko01120,map00360,map00643,map01100,map01120
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Evalue0.00025
EggNOG OGsCOG2124@1|root,KOG0156@2759|Eukaryota,39SXI@33154|Opisthokonta,3NU6J@4751|Fungi,3QJUX@4890|Ascomycota,21890@147550|Sordariomycetes
EC1.14.14.54
DescriptionCytochrome p-450
Cds size171
COG categoryQ
BRITEko00000,ko00001,ko00199,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854087.0388644-CDS-H-canaliculatus_M_contigs74930:256..4271696854087.0388644-CDS-H-canaliculatus_M_contigs74930:256..427Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs74930 257..427 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs74930.1.1prot_H-canaliculatus_M_contigs74930.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs74930 257..427 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs74930.1.1

>prot_H-canaliculatus_M_contigs74930.1.1 ID=prot_H-canaliculatus_M_contigs74930.1.1|Name=mRNA_H-canaliculatus_M_contigs74930.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=57bp
MTQVRKGDMLCCEQALGHMDPAVFGPDARQFNPKRFVGNPDLKKKVGQVT
HESSGI*
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mRNA from alignment at H-canaliculatus_M_contigs74930:257..427-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs74930.1.1 ID=mRNA_H-canaliculatus_M_contigs74930.1.1|Name=mRNA_H-canaliculatus_M_contigs74930.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=171bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs74930:257..427- (Hapterophycus canaliculatus Oshoro7m male)
ATGACGCAGGTCAGGAAGGGGGATATGCTCTGCTGTGAGCAGGCCCTCGG
CCACATGGATCCGGCCGTCTTCGGCCCTGACGCCCGACAGTTCAACCCCA
AGCGCTTCGTGGGAAACCCTGACCTCAAGAAGAAGGTGGGGCAAGTCACC
CACGAGTCTTCGGGCATTTAG
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs74930:257..427-

>mRNA_H-canaliculatus_M_contigs74930.1.1 ID=mRNA_H-canaliculatus_M_contigs74930.1.1|Name=mRNA_H-canaliculatus_M_contigs74930.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=171bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs74930:257..427- (Hapterophycus canaliculatus Oshoro7m male)
ATGACGCAGGTCAGGAAGGGGGATATGCTCTGCTGTGAGCAGGCCCTCGG
CCACATGGATCCGGCCGTCTTCGGCCCTGACGCCCGACAGTTCAACCCCA
AGCGCTTCGTGGGAAACCCTGACCTCAAGAAGAAGGTGGGGCAAGTCACC
CACGAGTCTTCGGGCATTTAG
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