mRNA_H-canaliculatus_M_contigs7493.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7493.1.1 vs.
Match: GatB/YqeY (n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTS6_ECTSI) HSP 1 Score: 201 bits (511), Expect = 1.730e-62 Identity = 105/119 (88.24%), Postives = 110/119 (92.44%), Query Frame = 1
Query: 1 FFSLFRKAGSGDTLPDEKCIAILRKMSKQQQESIDMYRKGKRDDLVEKEVKMQELIDGMLPKLADEATTQKWVDEAIASADAKGPSDMGKVMGLLMKAHKTEMDGGLAQRLVSAQLKGA 357
F + + AGSGD LPDEKCIAILRKMSKQQQESIDMYRKGKRDDLVEKE K ++LID MLP+LADEATTQKWVDEAIASA AKGPSDMGKVMGLLMKAHKTEMDGGLAQRLVSAQLKGA
Sbjct: 93 FLTETKAAGSGDKLPDEKCIAILRKMSKQQQESIDMYRKGKRDDLVEKETKTKQLIDAMLPQLADEATTQKWVDEAIASAGAKGPSDMGKVMGLLMKAHKTEMDGGLAQRLVSAQLKGA 211
BLAST of mRNA_H-canaliculatus_M_contigs7493.1.1 vs.
Match: Yqey-like (protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGF6_9STRA) HSP 1 Score: 135 bits (341), Expect = 5.680e-37 Identity = 69/117 (58.97%), Postives = 88/117 (75.21%), Query Frame = 1
Query: 1 FFSLFRKAGSGDTLPDEKCIAILRKMSKQQQESIDMYRKGKRDDLVEKEVKMQELIDGMLPKLADEATTQKWVDEAIASADAKGPSDMGKVMGLLMKAHKTEMDGGLAQRLVSAQLK 351
F ++AG+GDTLPD+KC+A+LRK+SK ++ESIDMY KG R +LV+KE +I+ LP+LAD+ TT KW +EAI SA AKGP DMGKVMG LM HK EMDG +AQ++V LK
Sbjct: 74 FLKETKEAGAGDTLPDDKCMAVLRKLSKMRKESIDMYAKGGRQELVDKETVELGIIESFLPQLADKETTTKWAEEAIESAGAKGPLDMGKVMGKLMSQHKDEMDGKIAQQVVGELLK 190
BLAST of mRNA_H-canaliculatus_M_contigs7493.1.1 vs.
Match: GatB/YqeY (domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V1N981_9DELT) HSP 1 Score: 109 bits (272), Expect = 3.630e-27 Identity = 58/118 (49.15%), Postives = 81/118 (68.64%), Query Frame = 1
Query: 1 FFSLFRKAGSGDTLPDEKCIAILRKMSKQQQESIDMYRKGKRDDLVEKEVKMQELIDGMLPKLADEATTQKWVDEAIASADAKGPSDMGKVMGLLMKAHKTEMDGGLAQRLVSAQLKG 354
F + +K GS D++PDE C +LR++ KQ++ESI+ + KG R+++ E E ++ LP LADEA T+ WV+ AIA A GP +MGKVMG LMKAHK E+DG LA+R+V +L G
Sbjct: 33 FLNEMKKDGS-DSIPDEVCETLLRRLEKQRKESIEAFVKGGREEMAEVERAELAVLQEFLPSLADEAQTRGWVEAAIAETGATGPKEMGKVMGALMKAHKGEIDGNLARRIVQERLAG 149
BLAST of mRNA_H-canaliculatus_M_contigs7493.1.1 vs.
Match: Hypothetical (protein n=6 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ABW1_9RHOD) HSP 1 Score: 108 bits (269), Expect = 1.820e-26 Identity = 57/116 (49.14%), Postives = 81/116 (69.83%), Query Frame = 1
Query: 1 FFSLFRKAGSGDTLPDEKCIAILRKMSKQQQESIDMYRKGKRDDLVEKEVKMQELIDGMLPKLADEATTQKWVDEAIASADAKGPSDMGKVMGLLMKAHKTEMDGGLAQRLVSAQL 348
F + ++AGS D++ DE+ + +LRK++KQ+ ESI++Y KG R DL E E LI+ LPKLADE TT+K+V EAI S + P DMGKVMG +MK HK+E+DG + +++ S L
Sbjct: 55 FLNKEKEAGS-DSISDEEALVVLRKLAKQRVESIELYEKGGRQDLAESEKSELALIEAYLPKLADEETTRKYVQEAIDSTKSSSPKDMGKVMGAVMKDHKSEVDGNVVRKIASELL 169
BLAST of mRNA_H-canaliculatus_M_contigs7493.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YP23_NANGC) HSP 1 Score: 104 bits (260), Expect = 1.600e-25 Identity = 54/111 (48.65%), Postives = 76/111 (68.47%), Query Frame = 1
Query: 16 RKAGSGDTLPDEKCIAILRKMSKQQQESIDMYRKGKRDDLVEKEVKMQELIDGMLPKLADEATTQKWVDEAIASADAKGPSDMGKVMGLLMKAHKTEMDGGLAQRLVSAQL 348
++ G+ +TLPDEK I IL K+ KQ+QESI+M+ KG RDD+V+ E +++ LP+LADEATT++WV AI A SD+GKVMG++MK +K + D L +LV L
Sbjct: 24 KEEGAAETLPDEKAILILTKLRKQRQESIEMFIKGNRDDMVQAEKAELAILETYLPQLADEATTREWVSAAIQETGASAKSDVGKVMGVMMKRYKGKTDNKLVSKLVGEML 134
BLAST of mRNA_H-canaliculatus_M_contigs7493.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS37_9STRA) HSP 1 Score: 106 bits (264), Expect = 1.950e-25 Identity = 55/111 (49.55%), Postives = 76/111 (68.47%), Query Frame = 1
Query: 16 RKAGSGDTLPDEKCIAILRKMSKQQQESIDMYRKGKRDDLVEKEVKMQELIDGMLPKLADEATTQKWVDEAIASADAKGPSDMGKVMGLLMKAHKTEMDGGLAQRLVSAQL 348
++ G+ +TLPDEK I IL K+ KQ+QESI+M+ KG RDD+V+ E +++ LP+LADEATT++WV AI A SDMGKVMG++MK +K + D L +LV L
Sbjct: 83 KEEGAAETLPDEKAILILTKLRKQRQESIEMFIKGNRDDMVQAEKAELAILETYLPQLADEATTREWVSAAIQETGASAKSDMGKVMGVMMKRYKGKTDNKLVSKLVGEML 193
BLAST of mRNA_H-canaliculatus_M_contigs7493.1.1 vs.
Match: Protein (YqeY n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YRT9_PORPP) HSP 1 Score: 103 bits (257), Expect = 3.910e-24 Identity = 49/112 (43.75%), Postives = 78/112 (69.64%), Query Frame = 1
Query: 16 RKAGSGDTLPDEKCIAILRKMSKQQQESIDMYRKGKRDDLVEKEVKMQELIDGMLPKLADEATTQKWVDEAIASADAKGPSDMGKVMGLLMKAHKTEMDGGLAQRLVSAQLK 351
+ G+ ++L D + + +L+K++K +++SI+ Y R D +KE + +I+ LP LADE T ++WV EAIA + AKGP+DMGKVMG+LMKAH+ E+DG +A+ + + LK
Sbjct: 106 KDGGNKESLTDAEAVDVLKKLAKVRKDSIEAYTNAGRKDAADKEARELAIIEQYLPTLADEGTVEQWVREAIAKSGAKGPADMGKVMGILMKAHRDELDGNMAKNIATEMLK 217
BLAST of mRNA_H-canaliculatus_M_contigs7493.1.1 vs.
Match: GatB/YqeY (domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A523JLU9_9DELT) HSP 1 Score: 101 bits (251), Expect = 5.880e-24 Identity = 53/115 (46.09%), Postives = 73/115 (63.48%), Query Frame = 1
Query: 4 FSLFRKAGSGDTLPDEKCIAILRKMSKQQQESIDMYRKGKRDDLVEKEVKMQELIDGMLPKLADEATTQKWVDEAIASADAKGPSDMGKVMGLLMKAHKTEMDGGLAQRLVSAQL 348
F K TL DE C +LRK++KQ+QESI + + R + E E +I+ LP LADEATT++W++EAIA+ A D+G+VMG LM+AHK E+DGGLA R+ +L
Sbjct: 33 FLFATKEDGSTTLADEACFPLLRKLAKQRQESISAFSEAGRSERAEAERAELSVIEEFLPSLADEATTRRWLEEAIAATGASSAKDVGRVMGALMQAHKGELDGGLANRIARERL 147
BLAST of mRNA_H-canaliculatus_M_contigs7493.1.1 vs.
Match: GatB/YqeY (domain-containing protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y3GUZ3_9DELT) HSP 1 Score: 100 bits (248), Expect = 1.480e-23 Identity = 53/113 (46.90%), Postives = 78/113 (69.03%), Query Frame = 1
Query: 1 FFSLFRKAGSGDTLPDEKCIAILRKMSKQQQESIDMYRKGKRDDLVEKEVKMQELIDGMLPKLADEATTQKWVDEAIASADAKGPSDMGKVMGLLMKAHKTEMDGGLAQRLVS 339
F + +K G+ +TLPDE CI +LR++ KQ++ESI+ + R++ KE +I+ LP LADEATT+ WV+EAIA + A ++GKVMG LMKAHK E+DGG A+++ +
Sbjct: 33 FLNEMKKDGA-ETLPDEICIGLLRRLEKQRKESIEAFDAAGREEQAAKERAELAVIETYLPSLADEATTRAWVEEAIAQSGASSAKELGKVMGALMKAHKGEIDGGRARQIAA 144
BLAST of mRNA_H-canaliculatus_M_contigs7493.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS44_9FLOR) HSP 1 Score: 100 bits (250), Expect = 2.000e-23 Identity = 51/116 (43.97%), Postives = 76/116 (65.52%), Query Frame = 1
Query: 1 FFSLFRKAGSGDTLPDEKCIAILRKMSKQQQESIDMYRKGKRDDLVEKEVKMQELIDGMLPKLADEATTQKWVDEAIASADAKGPSDMGKVMGLLMKAHKTEMDGGLAQRLVSAQL 348
F + ++ G+GD+LPD+ I LRK++K ++ESIDM+RKG RDDL + E ++I+ LP LA T +W EAIA A P D+GKVMG +M+ H+ ++DG A+++V L
Sbjct: 71 FLTALKQEGAGDSLPDKAAIEQLRKLAKMRKESIDMFRKGGRDDLADAEEAELDVIEQWLPTLASREQTIEWAKEAIAKVGASKPGDVGKVMGAIMREHREDIDGSSARQIVQELL 186 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7493.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7493.1.1 >prot_H-canaliculatus_M_contigs7493.1.1 ID=prot_H-canaliculatus_M_contigs7493.1.1|Name=mRNA_H-canaliculatus_M_contigs7493.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=95bp MSKQQQESIDMYRKGKRDDLVEKEVKMQELIDGMLPKLADEATTQKWVDEback to top mRNA from alignment at H-canaliculatus_M_contigs7493:3548..4864- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7493.1.1 ID=mRNA_H-canaliculatus_M_contigs7493.1.1|Name=mRNA_H-canaliculatus_M_contigs7493.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=1317bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7493:3548..4864- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7493:3548..4864- >mRNA_H-canaliculatus_M_contigs7493.1.1 ID=mRNA_H-canaliculatus_M_contigs7493.1.1|Name=mRNA_H-canaliculatus_M_contigs7493.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=285bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7493:3548..4864- (Hapterophycus canaliculatus Oshoro7m male)back to top |