mRNA_H-canaliculatus_M_contigs7487.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs7487.1.1
Unique NamemRNA_H-canaliculatus_M_contigs7487.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7487.1.1 vs.
Match: Ankyrin (repeat Transient receptor potential channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM43_ECTSI)

HSP 1 Score: 623 bits (1607), Expect = 1.160e-208
Identity = 340/489 (69.53%), Postives = 393/489 (80.37%), Query Frame = 1
Query:   43 PAQVAVACGAESVLSAMMRPEWISACLLDAPDESEAQLTALDLAARPPVKLNVIRCLLACGATPSARVVQKLLRNCSDVGGGQS-PYFKKDLIKLKREVNALVLCILRYLPDTVEGFDRFSATATATATPAFATSAERKAEPKPRKNPTKPHFAPKLPAFSREAPWGGSDDSKRAASRAKSSLGSTIARGV-AAVGGSMGASDGGSAITAVKSPSASGTGTSLVQQMLEPELAGLQPRHRAGPLAQARGASSAMQSRHVDFIFTPLVVDYLRLKFSAGLPNPFRETNWRREHGRMDGHLARFMLDDDESKLMVYILQGGCADSPSWTYFPGLQFILAGVVGKTAAFFGVPAMRLALDVLVYIGVVSVFVLKMLVLKNAGRLSPWDFLWMVYLVGAIWKQVHEVQEAGSIRVHLMNPWNVVEATSLASLSAAFFFRMWAYTCNGNGEFFCGEVL--SSSVNELNEVYLAQYFQAASAPFVLGRVLFLTQV 1497
            PAQVAVACGA++VL+AM+RP WISACLL+APDESEAQLTALDLAARPP KL VI+CLL+CGA P+ARVVQ+LLR CS+ GG  +  +FK +L+++K ++NALVL +LR+LPDTVEGFDRFSA A   A    A   +   +  P   P K     K+P F  E    G+ D   A + AK +L STIARGV AA  G +GA     A   +    AS  GT+LVQ+MLEPELAGLQPR  AGPLAQA      MQSRHVDFI+TPLVVDYLRLKFSAGLPNPFRET+WRREHGR+D +LARFM+++DES+LMVYILQGGC DSPSWTY PGLQFILAGV GKTAAFFGVPAMRLALDVLVY GVVSVFVLK++VL++ GR++ WD LW+VYLVGAIWKQVHEVQEAGS+RVHL NPWNVVEAT LASLS AFFFRM A+ C+G+GE+FCG++   S SVNELNEVYLAQYFQAASAPFVLG+VLFLTQV
Sbjct:  316 PAQVAVACGADAVLTAMLRPAWISACLLNAPDESEAQLTALDLAARPPAKLGVIKCLLSCGAIPTARVVQRLLRTCSEDGGAMAGSHFKNNLLQMKNDINALVLSVLRHLPDTVEGFDRFSAPAAGNAAGTGAAKPKLGQKTNPALTPAK-LLVSKMPTF--EEGHDGAVDEGNATAAAKLNLTSTIARGVTAASSGRLGA-----AAADLDDAPASEVGTTLVQEMLEPELAGLQPRDCAGPLAQA------MQSRHVDFIYTPLVVDYLRLKFSAGLPNPFRETDWRREHGRVDRNLARFMVNEDESQLMVYILQGGCPDSPSWTYLPGLQFILAGVAGKTAAFFGVPAMRLALDVLVYTGVVSVFVLKVVVLRDVGRITAWDVLWLVYLVGAIWKQVHEVQEAGSLRVHLFNPWNVVEATKLASLSTAFFFRMHAWVCDGHGEYFCGQLSTGSGSVNELNEVYLAQYFQAASAPFVLGKVLFLTQV 790          
BLAST of mRNA_H-canaliculatus_M_contigs7487.1.1 vs.
Match: Ion_trans (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCQ6_9PHAE)

HSP 1 Score: 426 bits (1095), Expect = 1.730e-137
Identity = 278/532 (52.26%), Postives = 321/532 (60.34%), Query Frame = 1
Query:   91 MMRPEWISACLLDAPDESEAQLTALDLAARPPVKLNVIRCLLACGATPSARVVQKLLRNCSDVGG--------------------------------GQSPY-------------------FKKDLIKLKREVNALVLCILRYLPDTVEGFDRFSATATATATPAFATSAERKAEPKPRKNPTKPHFAPKLPAFSREAPWGGSDDSKRAASRAKSSLGSTIARGV-AAVGGSMGASDGGSAITAVKSPSASGTGTSLVQQMLEPELAGLQPRHRAGPLAQARGA------SSAMQSRHVDFIFTPLVVDYLRLKFSAGLPNPFRETNWRREHGRMDGHLARFMLDDDESKLMVYILQGGCADSPSWTYFPGLQFILAGVVGKTAAFFGVPAMRLALDVLVYIGVVSVFVLKMLVLKNAGRLSPWDFLWMVYLVGAIWKQV----HEVQEAGSIRVHLMNPWNVVEATSLASLSAAFFFRMWAYTCNGNGEFFCGEVL--SSSVNELNEVYLAQYFQAASAPFVLGRVLFLTQ 1494
            M+RP WISACLL+APDESEAQLTALDLAARPP KL VI+CLLACGA P+ARVVQ+LLR CS+ GG                                G + Y                    + +L+++K ++NALVL +LR+LPDTVEGFDRFS  A   A    A   +   +  P   P K   + K+  F  E    G+ +   A +  K +L STIARGV AA  G + A     A   +    AS  GTSLVQ+MLEPELAGLQPR  AGPLAQAR A      S AMQSRHVDFI+TPLVVDYLRLKF                                                           ILAGV GKTAAFFGVPAMRLALDVLVY GVVSVFVLK++VL++ GR++ WD LW+VYLVGAIWKQV    HEVQEAGS+RVHL NPWNVVEAT LASLS AFFFRM A+ C+G+GE+FCG++   S SVNELNEVYLAQYFQAASAPFVLG+VLFLTQ
Sbjct:    1 MLRPAWISACLLNAPDESEAQLTALDLAARPPAKLGVIKCLLACGAIPTARVVQRLLRTCSEDGGAVAVSGSGLAAVRECFLGAMIASEWAVNPLIPGLNLYTAINAARRQVGRHVKACGAMRNNLLQMKNDINALVLSVLRHLPDTVEGFDRFSTPAAGNAAGTGAAKPKLGKKTNPTLTPAKLPVS-KVSTF--EEDHDGAVEEGNATAATKLNLTSTIARGVTAASSGRLEA-----AAADLDDVPASEVGTSLVQEMLEPELAGLQPRDCAGPLAQARRACGETSKSFAMQSRHVDFIYTPLVVDYLRLKF-----------------------------------------------------------ILAGVAGKTAAFFGVPAMRLALDVLVYTGVVSVFVLKVVVLRDVGRITAWDVLWLVYLVGAIWKQVWMVVHEVQEAGSLRVHLFNPWNVVEATKLASLSTAFFFRMHAWVCDGHGEYFCGQLSTGSGSVNELNEVYLAQYFQAASAPFVLGKVLFLTQ 465          
BLAST of mRNA_H-canaliculatus_M_contigs7487.1.1 vs.
Match: Ion_trans (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJ53_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 2.820e-21
Identity = 93/288 (32.29%), Postives = 141/288 (48.96%), Query Frame = 1
Query:  688 GTGTSLVQQMLEPELAGLQPRHRAGPLAQARGASSAMQSRHVDFIFTPLVVDYLRLKFSAGLPNPFRETNWRRE--HGRMDGHLARFMLD-------DD-----ESKLMV--YILQGGCADSPSWTYFPGLQFILAGVVGKTAAFFGVPAMRLALDVLVYIGVVSVF--VLKMLVLKNAGRLSPWDFLWMVYLVGAIWKQVHEVQEAGSIRVHLMNPWNVVEATSLASLSAAFFFRMWAYTCNGNGEFFCGEVLSSSVNELNEVYLAQYFQAASAPFVLGRVLFLTQV 1497
            G G   VQ +LEPE+ G +     GPLA+A      +++R ++F  T +V+ Y+  KFS GLP  F   +W+    H R      RF+L        D+       +L V   ++QG      S    PGLQF   G+  +  AF+ VPA+R+A DV+ Y+ ++ +F  V+K   L++  ++   +  + VY++G +  ++ E +    +R      WNVVEA  L  + AAF FRM A+               S V E    +LAQ F A +AP    RVLFL Q+
Sbjct:  733 GQGFEAVQWLLEPEMGGKRISSFTGPLARA------LETRRLEFFSTNIVLAYVSRKFSRGLPGVFSGASWKMPDMHNR---DTRRFVLGLPYGAAPDNVVGAVRMRLCVPFELIQGSALRRTS--LIPGLQFNCVGLASRPDAFYEVPAVRMACDVVTYLSMLILFCFVVK---LESPTKIPAKEVAFYVYMLGNMVNELGEARYVRKLRGQ-SELWNVVEAVLLGLVCAAFTFRMVAF--------------GSDVIEEEAFFLAQLFFAMAAPLFFSRVLFLAQI 991          
BLAST of mRNA_H-canaliculatus_M_contigs7487.1.1 vs.
Match: Ion_trans (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KIV5_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 6.970e-11
Identity = 73/258 (28.29%), Postives = 120/258 (46.51%), Query Frame = 1
Query:  757 AGPLAQARGASSAMQSRHVDFIFT--PLVVDYLRLKFSAGLPNPFRETNWRREHGRMDGHLAR-----FMLDDDES-----KLMVYILQGGCADSPSWTYFPGLQFILAGVVGKTAAFFGVPAMRLALDVLVYIGVVSVFVLKMLVLKNAGRLSPWDFLWMVYLVGAIWKQVHEVQEAGSIRVHLMNPWNVVEATSLASLSAAFFFRMWAYTCNGNGEFFCGEVLSSSVNELNEVYLAQYFQAASAPFVLGRVLFLTQ 1494
            +GPL  A      +Q+RH   +F   PLV+DYL   F+ GLP         +E  +    + R         D ES     + ++ +L+G  +   S T   G QFILA VV + A  + VPA+R+A+D+LVY+ ++++F   +L  K  G +   + ++ VY++GAI  ++ E+ +      ++ + WN ++  +LA    AF  R++      + E   G  L                  A AP +L R LF  Q
Sbjct:  294 SGPLEMA------LQARHQLELFCTQPLVLDYLNRAFTRGLPGLDASETGAQEADQFKLLMQRNASVQVNAGDGESSGEVSRELLEVLEGSHSVLGSLTLSAGKQFILAQVVARPAFSYSVPAVRMAVDLLVYLLMLALFAKDVLWYKE-GTVEVGEVVFFVYVLGAILVEITELWDGRE--EYMKDHWNALDVAALAFCGGAFLVRVY------DPESLWGRAL----------------YCAGAPLLLFRTLFFAQ 520          
BLAST of mRNA_H-canaliculatus_M_contigs7487.1.1 vs.
Match: Ankyrin (Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX79_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 1.020e-10
Identity = 77/332 (23.19%), Postives = 133/332 (40.06%), Query Frame = 1
Query:  802 SRHVDFIFTPLVVDYLRLKFSAGLPN-------------------PFRETNWRR--------------------EHGRMDGHLARFM-------LDDDESKLMVYILQGGCADSPSWTYFPGLQFILAGVVGKTAAFFGVPAMRLALDVLVYIGVVSVFVLKMLVLKNAGRLSPWDFLWMVYLVGAIWKQVHE-----------------------------VQEAGSIRVHLMN---------------------PWNVVEATSLASLSAAFFFRMWAYTCNGN----GEFFCGEVLSSSVNELNEVYLAQYFQAASAPFVLGRVLFLTQV 1497
            S+ +DF+ +PLV+DY+ +KFS  LPN                    F E N+                         + D  L RF+       ++ +E        +      P  T  P LQF LAG++GK A F+ VPA+R AL+ L Y+ ++ +F    + L+++ R+ P +  + V++ G +W+++ E                             VQ A S R  +++                      WN+++  +L+++  AF FR+      G     G++F               ++AQ+F A SAP +  R+L L+Q+
Sbjct:  850 SKALDFVDSPLVLDYIHVKFSCTLPNWASSSSIPKTINAGFYTYNAFDEYNFSEVLSVRPEPPEANPGGGSQPCNSKKWDDRLLRFLQGWNPTDMNPEEQPRGKSTRRSDRNKLPHTTILPMLQFSLAGLIGKPAVFYNVPAVRFALEFLHYLVMLGLFC-SCVKLQDSYRIPPAEVAFYVFMAGTLWREILEFCDGVPARHRRHRKNKHIKEGNQANMATAVQGASSKRSDMVDYGQGRGLKRVASAITRYLFYDTWNLLDTLTLSTVFLAFVFRLLGIREFGGPTDPGDYF---------------FVAQFFLAVSAPLLFARLLRLSQI 1165          
BLAST of mRNA_H-canaliculatus_M_contigs7487.1.1 vs.
Match: Ankyrin (Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR6_ECTSI)

HSP 1 Score: 74.7 bits (182), Expect = 2.370e-10
Identity = 74/299 (24.75%), Postives = 121/299 (40.47%), Query Frame = 1
Query:  694 GTSLVQQMLEPELAGLQPRHR--AGPLAQARGASSAMQSRHVDFIFTPLVVDYLRLKFSAGLPNPFRETN----------------WRREHGR-MDGHLARFMLDDDESKLMVYILQGGCADSPSWTYFPGLQFILAGVVGKTAAFFGVPAMRLALDVLVYIGVVSVFVLKMLVLKNAGRLSPWDFLW------------MVYLVGAIWKQVHEVQEAGSIRVHLMNPWNVVEATSLASLSAAFFFRMWAYTCNGNGEFFCGEVLSSSVNELNEVYLAQYFQAASAPFVLGRVLFLTQV 1497
            GT     +LEPEL   Q       GPL         +++    F   PL++D+L  KF+ GLP+                      +R EHG  +DG     +       L+  + QG   ++P+ T+ PG QFI+A +V     ++ VPAMR+ LD +VY+G+V+     +L     G     D +             ++++    +++  E++    IR +  + WNV++A  +  L      R   +T      F+                      A SAP V+ RVLF  Q+
Sbjct:  592 GTDSCTNVLEPELMRAQSGSNDLGGPLDMIISDPLQLET----FCKVPLIMDFLSSKFTLGLPDLMDTAGLLKNEHQLWYLEEDGLFRDEHGLGLDGIPVALL-----EALLKGVRQGIWDNTPTLTFLPGAQFIVAAMVAAPTKYYEVPAMRMLLDFVVYVGMVAALSYFVLFHSTTGSDPGLDGIADHRFSLSEGACALIFITAGAYREGREMKRG--IRAYFKDQWNVLDALGMLFLFVGLVIRWDDWTSTWGPAFY----------------------ALSAPLVVARVLFFAQI 857          
BLAST of mRNA_H-canaliculatus_M_contigs7487.1.1 vs.
Match: Ion_trans (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU4_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 1.720e-9
Identity = 67/255 (26.27%), Postives = 111/255 (43.53%), Query Frame = 1
Query:  817 FIFTPLVVDYLRLKFSAGLPNPFRETN----------------WRREHGRMDGHLARFMLDDDESKLMVYILQGGCADSPSWTYFPGLQFILAGVVGKTAAFFGVPAMRLALDVLVYIGVVSV---FVLKMLVLKN--------AGRLSPWDFLW-MVYLVGAIWKQVHEVQEAGSIRVHLMNPWNVVEATSLASLSAAFFFRMWAYTCNGNGEFFCGEVLSSSVNELNEVYLAQYFQAASAPFVLGRVLFLTQV 1497
            F   PL++D+L  KF+ GLP+                      +R EHG     +   +L    + L+  + QG   ++P  T+ PG QFI+A +V     ++ VPAMR+ LD +VY+G+V+V   FVL     ++        A RLS  +    ++++    +++  E++    IR +  + WNV++A  +  L      R   +T      F+                      A SAP V+ RVLF  Q+
Sbjct:  648 FCKVPLIMDFLSSKFTLGLPDLMDTAGLLKNEHHLWYLEEDGLFRDEHGFGSDGIPVALL----AALLKGVRQGIWDNTPILTFLPGTQFIVAAMVAAPTKYYEVPAMRMLLDFVVYVGMVAVLSSFVLFHSTTESDSGLDGIVAHRLSLSEGACALIFITAGAYREGREMKRG--IRAYFKDQWNVLDALGILFLFVGLVIRWDDWTSTWGPAFY----------------------ALSAPLVVARVLFFAQI 874          
BLAST of mRNA_H-canaliculatus_M_contigs7487.1.1 vs.
Match: Ankyrin (Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH97_ECTSI)

HSP 1 Score: 68.9 bits (167), Expect = 1.500e-8
Identity = 74/317 (23.34%), Postives = 127/317 (40.06%), Query Frame = 1
Query:  811 VDFIFTPLVVDYLRLKFSAGLP-----NPFRET---------NWR----------REHGRMDGHLA---------------RFMLDDDES--KLMVYILQGG----CADSPSW-----TYFPGLQFILAGVVGKTAAFFGVPAMRLALDVLVYIGVVSVFVLKMLVLKNAGRLSPWDFLWMVYLVGAIWKQVHE-----------------VQEAGSI---------------------RVHLMNPWNVVEATSLASLSAAFFFRMWAYTCNGNGEFFCGEVLSSSVNELNEVYLAQYFQAASAPFVLGRVLFLTQV 1497
            ++F+F+PLV+DY+ +KF+  LP     NPF+ T         N+            ++ +  G  A                F+     S    ++  LQG       D   W     T  PGLQF LAG++GK   FF VP +R   ++  Y+ ++ +F   +L LK    +   + ++ ++  G +W++V E                  +E G +                     R    + WN ++ +++  +  AF FRM A     + EF              +++ AQ+F A SAP +  R+L L+Q+
Sbjct:  739 LEFLFSPLVLDYVHVKFAGTLPHWSSRNPFQPTINEGLYKYDNFEVYDLAKLLRGSKNDQATGRTAPSGASSASTGSTNRGSFLWRSPGSIMSFLLRFLQGWDHPRSNDQSVWSIPHLTILPGLQFSLAGILGKPETFFKVPVIRFVYEIFSYLVMLVLFCSSVL-LKEPDFIPRDEVIFYIFAAGLLWREVLEFLDGVPTRRHRTSGGPRTEEGGRVEPGISHLGAGSNFNRMVSAFTRYVFYDTWNFMDTSTICCIFVAFIFRMIA---RFDSEF--------------DLFYAQFFYALSAPLLFSRLLVLSQI 1037          
BLAST of mRNA_H-canaliculatus_M_contigs7487.1.1 vs.
Match: Ankyrin (Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB1_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 2.660e-8
Identity = 82/322 (25.47%), Postives = 127/322 (39.44%), Query Frame = 1
Query:  691 TGTSLVQQMLEPELAGLQPRHRAGPLAQARGASSAMQSRHVD-FIFTPLVVDYLRLKFSAGLPN--------------------------------PFRETNWRREHGRMDGHLARFMLDD---DESKLM------------VYILQGG-CAD----SPSWTYFPGLQFILAGVVGKTAAFFGVPAMRLALDVLVYIGVVSVFVLKMLVLKNAGRLSPWDFLWMVYLVGAIWKQVHEVQEAGSIRVHLMNPWNVVEATSLASLSAAFFFRMWAYTCNGNGEFFCGEVLSSSVNELNEVYLAQYFQAASAPFVLGRVLFLTQV 1497
            TG S V    EPEL+    R   GPL  A       + +HV  F   PL+ D+L  +F+ GLP                                    E   R+E GR         L D    E KL+              +LQG  CA     + S T+ PG QF +AG+VG    ++ VPAMR+ LD+ VY+G++ VF   +++    G L+P +  +  Y++  I  +  E++      ++  + WN+++   L  ++     R        +G+   G  L                 A SAP +  R+LF  Q+
Sbjct:  631 TGCSAV---FEPELSREDARGLPGPLRLA-----LQERQHVQTFCTQPLLTDFLSRRFTYGLPGLRDTQNILGDRRELTNLARGGPGELMSGQKYLALDEEGRRKEDGRSLDRCLLLDLQDKIGQEGKLLDSRKIIDTLLSPCILLQGANCAGLWNTAVSLTFLPGAQFTIAGLVGMPDQYYRVPAMRMLLDLAVYLGML-VFFSTVVLFHEDGPLTPGEAAFAFYILAGIITEGQEMRR--DFGLYAADHWNILDLLGLGLVTGGLIVRC------ADGDNSWGRAL----------------YALSAPLIFSRLLFFAQM 919          
BLAST of mRNA_H-canaliculatus_M_contigs7487.1.1 vs.
Match: Ion_trans (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT3_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 7.380e-8
Identity = 74/322 (22.98%), Postives = 125/322 (38.82%), Query Frame = 1
Query:  811 VDFIFTPLVVDYLRLKFSAGLP-----NPFRET------------------------NWRREHGRMDG-------------HLARFM--LDDDESKLMVYILQGGCADSPS-----WTY------FPGLQFILAGVVGKTAAFFGVPAMRLALDVLVYIGVVSVFVLKMLVLKNAGRLSPWDFLWMVYLVGAIWKQVHEVQEAGSIRVHLMN--------------------------------------PWNVVEATSLASLSAAFFFRMWAYTCNGNGEFFCGEVLSSSVNELNEVYLAQYFQAASAPFVLGRVLFLTQV 1497
            ++F+F+PLV+DY+ +KF+  LP     NPF+ T                        N + + G                  L  F+  L       ++ +LQG   D P      W Y       PGLQF LAG++GK   FF VP +R   +   Y+ ++ +F   +L LK    +   + ++ ++  G +W++V E  +    R H ++                                       WN ++ +++  +  AF FRM A     + EF              +++ AQ+F A SAP +  R+L L+Q+
Sbjct:  104 LEFLFSPLVLDYVHVKFAGTLPPWWSRNPFQPTINEGFFEYDDFEVYDLAKLLRGSGNDQAKGGNEPSGTPTASTGSTAGESLGSFLWQLPGSFMSFLLRVLQGW--DHPRSNESVWYYVPHLTILPGLQFSLAGILGKPETFFKVPVIRFVYESFSYLVMLVLFCSSVL-LKEPDFIPRDEVIFYIFAAGLLWREVLEFLDGVPTRRHRISRGLGPEVGGRVKPGISHLGAGSNFNRMVSAFTRYVFYDTWNFMDMSTICCILVAFIFRMIA---RFDSEF--------------DLFYAQFFYALSAPLLFSRLLVLSQI 405          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7487.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
Ankyrin1.160e-20869.53repeat Transient receptor potential channel n=1 Ta... [more]
Ion_trans1.730e-13752.26domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Ion_trans2.820e-2132.29domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
Ion_trans6.970e-1128.29domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
Ankyrin1.020e-1023.19Repeat Transient Receptor Potential Channel n=1 Ta... [more]
Ankyrin2.370e-1024.75Repeat Transient Receptor Potential Channel n=1 Ta... [more]
Ion_trans1.720e-926.27domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Ankyrin1.500e-823.34Repeat Transient Receptor Potential Channel n=1 Ta... [more]
Ankyrin2.660e-825.47Repeat Transient Receptor Potential Channel n=1 Ta... [more]
Ion_trans7.380e-822.98domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs7487contigH-canaliculatus_M_contigs7487:386..5144 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LM43
PFAMsIon_trans,WD40
Model size1500
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons7
Evalue1.9e-209
EggNOG OGsKOG3676@1|root,KOG3676@2759|Eukaryota
Descriptioncalcium ion transmembrane transport
Cds size1500
COG categoryU
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs7487.1.1prot_H-canaliculatus_M_contigs7487.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs7487 386..5144 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854086.0681643-CDS-H-canaliculatus_M_contigs7487:385..6521696854086.0681643-CDS-H-canaliculatus_M_contigs7487:385..652Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7487 386..652 -
1696854086.0840888-CDS-H-canaliculatus_M_contigs7487:819..10421696854086.0840888-CDS-H-canaliculatus_M_contigs7487:819..1042Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7487 820..1042 -
1696854086.0969226-CDS-H-canaliculatus_M_contigs7487:2025..21771696854086.0969226-CDS-H-canaliculatus_M_contigs7487:2025..2177Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7487 2026..2177 -
1696854086.1114824-CDS-H-canaliculatus_M_contigs7487:2589..26551696854086.1114824-CDS-H-canaliculatus_M_contigs7487:2589..2655Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7487 2590..2655 -
1696854086.1257834-CDS-H-canaliculatus_M_contigs7487:2999..35031696854086.1257834-CDS-H-canaliculatus_M_contigs7487:2999..3503Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7487 3000..3503 -
1696854086.1400614-CDS-H-canaliculatus_M_contigs7487:4308..45451696854086.1400614-CDS-H-canaliculatus_M_contigs7487:4308..4545Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7487 4309..4545 -
1696854086.158569-CDS-H-canaliculatus_M_contigs7487:5093..51441696854086.158569-CDS-H-canaliculatus_M_contigs7487:5093..5144Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7487 5094..5144 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs7487.1.1

>prot_H-canaliculatus_M_contigs7487.1.1 ID=prot_H-canaliculatus_M_contigs7487.1.1|Name=mRNA_H-canaliculatus_M_contigs7487.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=500bp
ILTLLGGRNKQGQTPAQVAVACGAESVLSAMMRPEWISACLLDAPDESEA
QLTALDLAARPPVKLNVIRCLLACGATPSARVVQKLLRNCSDVGGGQSPY
FKKDLIKLKREVNALVLCILRYLPDTVEGFDRFSATATATATPAFATSAE
RKAEPKPRKNPTKPHFAPKLPAFSREAPWGGSDDSKRAASRAKSSLGSTI
ARGVAAVGGSMGASDGGSAITAVKSPSASGTGTSLVQQMLEPELAGLQPR
HRAGPLAQARGASSAMQSRHVDFIFTPLVVDYLRLKFSAGLPNPFRETNW
RREHGRMDGHLARFMLDDDESKLMVYILQGGCADSPSWTYFPGLQFILAG
VVGKTAAFFGVPAMRLALDVLVYIGVVSVFVLKMLVLKNAGRLSPWDFLW
MVYLVGAIWKQVHEVQEAGSIRVHLMNPWNVVEATSLASLSAAFFFRMWA
YTCNGNGEFFCGEVLSSSVNELNEVYLAQYFQAASAPFVLGRVLFLTQV*
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mRNA from alignment at H-canaliculatus_M_contigs7487:386..5144-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs7487.1.1 ID=mRNA_H-canaliculatus_M_contigs7487.1.1|Name=mRNA_H-canaliculatus_M_contigs7487.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=4759bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7487:386..5144- (Hapterophycus canaliculatus Oshoro7m male)
ATTTTGACCCTTCTAGGAGGGCGCAACAAGCAGGGCCAGACGCCGGCTCA GGTACAACGGATTGTGGCACACCTTCAGACTCTTAGAATTAGCAACAGCG TGCCTCTCAAGATTGACCCGGCACATGTCGGATCTTTATACAGTACACGT ACAGAATATGATAGGCGATCACCTCTATTCTCTCGTTCCTCCGCTCGTGG AATGGCTCCTACAGTGATGCACCAACATTATGAGGATCATTGCCTGTCAC GCGTTTGGGTTCGACGATCTGAGTGCAGTGTAAGAGAAGCGTGGCTCCTG ATGGGACACGAAAATTACACACCGCGAGCTTGCACAAATGTGTACCCTCT GCAGGAGACCTGCCGCCATTATCATCACATCGCCACAACCATCCATTGAA ACCCAACGGCGTTTGCATTGAACTTTCAACCTGTTGATTTACTATTTCAT TAAGACTACAACAAACATATTTGGAGCCCTCCTTTTCTTATTTCTATCCG TACTCACCATACAATGCGCTTCCTCTTTGCACGCGAATAATCCTTGGACC CTTCCGGCGCATTGAGCATTTTTTATCTAAATTTTGCTCCGTTGTGTAGG TAGCAGTGGCTTGCGGGGCCGAAAGCGTTCTCAGCGCCATGATGCGCCCC GAGTGGATATCTGCCTGCCTTCTCGACGCGCCAGACGAGTCAGAAGCGCA GTTGACCGCCCTCGACCTCGCCGCACGGCCGCCGGTCAAGCTCAACGTGA TTCGATGCCTCCTAGCCTGCGGCGCGACGCCGTCAGCACGGGTCGTGCAA AAGCTTCTACGGAACTGCAGCGACGTTGGCGGCGGCGTCAGCGGCTTGGG GGGTGCAGCGAAAGGGATCGACGAGGGCGGTGTAGCCGCTGTACGGGAGT GCTTTCTCGGGTCAATGGCTTGTTCGGAGTGTGCCCTTAATCCTCTGATA CCAGGGTTGAACCTGTACGTCGCGATCATCGCTGCCAGGAGGCAGGTAAA CCGGCGTGCTGTGACACAAAGTAGGGTACCTCAGGAGGGTAGGGATACAC GCGTCGGGGGGAGCGAAGTTTTGCCAATAGACAGAGCTTGAGCGCCTTCG TTCTCGCCAAGCCGTTTCGTTTTGCAGGCGAAAAACTTCGGCACTGGGTT CGAGCAGCCCACGTCGCTCTTCTCGTGCAGGGATGTTCGATCCGTTATTC TCACAGAAGACAGCTCAGCGTCGACGGAGAAATGCAGGAAGGAAGCACGC GAACGGATATATTTCGCTCAAATGCATAAGGAACGTGGGCGCTCAGACCT GAAACCCAATCCTGGGTGAAGGAAAAAGCACGACAAGACAATACTTAAAT CGCGATACCTCGAAGTACTAGTTCCTCTGGTCACCTGCTCGTTTTTAGCC GATAGCCCAATCTCTTGCTTGCGTGCGTTGTGCTCCAACTGCCGCGTATT CGTTCAATCGCCATCTAAGTCAAGCTTACGTTTGATCTTTATCCACCCTC TCCCTCTTGTTGCCCCCCCCTGCCTTGTACTCGTGTGCCCTAAATTTCAT GGGTTTCCGTTGCCGCTGCGCGCGGCGGATGCAATCGACCACGATCCCTC TTGTCGAACCGCGAATCACGGCATGGCGGCCACACGGCAAGCAGAGTCCC TACTTCAAAAAGGACCTCATAAAATTGAAGCGCGAGGTCAACGCTCTGGT CCTCTGCATCTTGAGATATCTCCCGGACACCGTGGAAGGCTTTGATCGCT TCTCCGCTACCGCAACGGCCACTGCCACCCCTGCCTTCGCTACTTCAGCT GAACGCAAGGCCGAGCCCAAGCCGAGAAAAAATCCTACAAAGCCACACTT TGCCCCCAAGCTGCCCGCCTTTTCCCGCGAGGCTCCGTGGGGCGGCAGCG ACGACAGCAAAAGAGCCGCATCGAGGGCAAAATCGTCTCTCGGCTCGACC ATCGCTCGCGGGGTTGCTGCTGTGGGCGGGTCGATGGGGGCGAGTGATGG CGGTAGCGCAATCACTGCCGTTAAAAGTCCGTCCGCATCGGGGACGGGCA CTAGCCTTGTGCAACAGATGTTGGAGCCCGAGCTGGCAGGGCTCCAGCCA AGGCATCGCGCCGGTCCACTAGCCCAGGCGAGAGGAGCCTCCAGCGTTAG CACCTTGTTGCTGTTGCTATTATTGTTGCTGTTGTTGTTGTCGTTGTTGT TGTGTATCTTTTATGATAATTATGGTTGTGTTGAACGATTACAGCCCCAC CTCATGGTCATGGGTTGGGCACACACAAAAAAATGGGCCGAAAGAAAAAA TCTTCGACACAACAGAAGCAAAGAAATATGTAATCCAAACACGAACTAAA ACTCAAAGTCATTTTGTTTTCAACAAATAGCGATTGGTGTTCGTTTGATC CATCAAACGCTTCCCGAGAAGGCGTCCATCATGCTGTTCTCACCAGCCTT CACAAGAGTAACTTCAAATCAACGACGACGATATGACAGGCGATGCAGTC AAGGCACGTGGACTTCATTTTCACGCCCCTAGTGGTTGACTATCTCCGAC TGAAGGTAAACCTGGCCCGATCAGAGATTGGGCACGTGGTTCGCTGCTTA GAGCTTTCCATCTTTTTCTGATCTCTCTGAATAGCGATGATGCTACTTTC AGAGACTGCACGATTTTTTGTTACAAACGGCCACAAGGACGAGAGCCCTC TAGACTAACCTGCTTTGCCACATAAACTTCGCTACTCCACCTTTCGCGAT GATCACGTCAAATTTTGCAATAGCAACTCCATTGATCATCTACAGCTCGC TTATCTTCTTCTTAAAAACTTGTCAGGTCACCTCCCGCGTCGTACATTCC TACGCCGTACTGTGATGGTTTCCTTTTTGTCGACGGTGCATCGATCTCTT CGGGGGCGGTGATTGGTTGTGCGATTTTGAGCGGTGTACCCCCCGATCAA CGCACTTCTCTTTTCAGTTCAGCGCCGGCCTGCCAAACCCTTTCCGCGAA ACCAACTGGCGTCGCGAGCACGGCCGCATGGATGGCCACCTCGCGAGGTT CATGCTCGACGATGATGAGTCTAAGCTGATGGTTTATATCTTGCAGGGAG GGTGTGCGGATTCACCAAGGTCAGTCGATCAAGTAATCAGTTGGAAGGTG CCGAAGCGAGAATGGCTACGGTCGCTATGTTTGCTGCGTACATACGATGA TTCTGTCGTATCATACGGATAACGTCGGATGGCGAAAGTCGGCGTCAATT CGAGATGAAACTTATGCGTATGATTTATTGCCGCCCCCTTTATGCCTGGT CATCTTACATTTCACAGGGTGTGATCATTCTCGTGCAGGGGTTCTTTGGG GGGGGTCGGGGTATTTCAGAACGACAGGAGAGAACGGAATTGAGCTTGAA GTTCTCAGCTGAGGCCTTATGCTTGACTCCTCCGTCACCCTGCAAGAGCT GAAATCTCGCGGCTATGGCGGTAGCAGCGCTTGCTGTCCACCCCTACCGC GAGACCGTGGAGGGAAGCTTATCGTGTTGCTTAAACATCTTGGCGCCTCA AAGAAAGTCTCTCGTCTCATACACGGTTCTACTGTAACACTGCCCAGAAA ACTTTCACCATAAATCAACTCTCACCTCACCTTGTCCAAAACTCAGCAAT GAAGAAACCACACTACATGCGTGCATCATATCTGGTATGTACAGGAACCT TTAAGGTTGCATGTGTGCGCTAGTGCCTGTTCATGGCCAACTGTTCTCGA TGATTTCCACCCGAAACAACCCGCGTGCAGTCCCTGATTACTGCAAGCAG CTCGTTATCTGACATCTCTTACCGCATCGATTTACGAAGACTTTCGTTTC CTTAGGTAACTTTTCCTTACTGACGACAAACCTATGAAAAAGACGTTCCT TCTCCGACGGATCTACTGGCGTCACCTCCGGAGCCACAGAACCGTTCCAC ACCATTCACAAGGGACCAAGCAGGTCTGCTTTGCGGACGTGCACTTCACA CAAAATAAACTTTAAAATTCTTGCTCTGGTCGGATAGGGATCTGCTGACC TAACCCCGTGAGAAACAACGTGCGTGATCGCTAACCACAATGAATCAAAC AGCTGGACATATTTTCCGGGTCTGCAATTTATCCTCGCTGGCGTCGTGGG CAAGACGGCGGCCTTCTTCGGCGTCCCCGCTATGCGCCTTGCTCTGGATG TCTTGGTATACATAGGGGTTGTGTCCGTGTTCGTGCTGAAGATGTTGGTG CTGAAAAATGCCGGCAGACTGTCGCCATGGGACTTCCTGTGGATGGTGTA CCTGGTCGGAGCAATATGGAAACAGGTATGATTGCGAACGCGGGAGTCAC TGAAGTTTGTACGGCGCGTCTTATCCCGAAGGCGTCGGTGGGCAAGAGAA AGCCTGCTATTTCGTAGGTGCCCTGCACTTGGATACTCGACCGTGTACAG TTCCGCCGCCACCATCAACAACAACAACAACAACAACAACAGGTGCACGA GGTGCAGGAGGCAGGATCAATCCGCGTGCACCTCATGAACCCCTGGAACG TGGTTGAGGCCACTTCCCTGGCCTCCCTATCCGCGGCCTTCTTCTTCCGG ATGTGGGCATACACGTGCAACGGCAACGGCGAGTTCTTTTGCGGCGAGGT TTTGAGCTCGTCGGTGAACGAGCTCAACGAGGTGTACCTGGCGCAATACT TCCAGGCGGCCTCCGCACCGTTCGTACTCGGCAGAGTCCTCTTTCTCACG CAGGTGTGA
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7487:386..5144-

>mRNA_H-canaliculatus_M_contigs7487.1.1 ID=mRNA_H-canaliculatus_M_contigs7487.1.1|Name=mRNA_H-canaliculatus_M_contigs7487.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=1500bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7487:386..5144- (Hapterophycus canaliculatus Oshoro7m male)
ATTTTGACCCTTCTAGGAGGGCGCAACAAGCAGGGCCAGACGCCGGCTCA
GGTAGCAGTGGCTTGCGGGGCCGAAAGCGTTCTCAGCGCCATGATGCGCC
CCGAGTGGATATCTGCCTGCCTTCTCGACGCGCCAGACGAGTCAGAAGCG
CAGTTGACCGCCCTCGACCTCGCCGCACGGCCGCCGGTCAAGCTCAACGT
GATTCGATGCCTCCTAGCCTGCGGCGCGACGCCGTCAGCACGGGTCGTGC
AAAAGCTTCTACGGAACTGCAGCGACGTTGGCGGCGGCCAGAGTCCCTAC
TTCAAAAAGGACCTCATAAAATTGAAGCGCGAGGTCAACGCTCTGGTCCT
CTGCATCTTGAGATATCTCCCGGACACCGTGGAAGGCTTTGATCGCTTCT
CCGCTACCGCAACGGCCACTGCCACCCCTGCCTTCGCTACTTCAGCTGAA
CGCAAGGCCGAGCCCAAGCCGAGAAAAAATCCTACAAAGCCACACTTTGC
CCCCAAGCTGCCCGCCTTTTCCCGCGAGGCTCCGTGGGGCGGCAGCGACG
ACAGCAAAAGAGCCGCATCGAGGGCAAAATCGTCTCTCGGCTCGACCATC
GCTCGCGGGGTTGCTGCTGTGGGCGGGTCGATGGGGGCGAGTGATGGCGG
TAGCGCAATCACTGCCGTTAAAAGTCCGTCCGCATCGGGGACGGGCACTA
GCCTTGTGCAACAGATGTTGGAGCCCGAGCTGGCAGGGCTCCAGCCAAGG
CATCGCGCCGGTCCACTAGCCCAGGCGAGAGGAGCCTCCAGCGCGATGCA
GTCAAGGCACGTGGACTTCATTTTCACGCCCCTAGTGGTTGACTATCTCC
GACTGAAGTTCAGCGCCGGCCTGCCAAACCCTTTCCGCGAAACCAACTGG
CGTCGCGAGCACGGCCGCATGGATGGCCACCTCGCGAGGTTCATGCTCGA
CGATGATGAGTCTAAGCTGATGGTTTATATCTTGCAGGGAGGGTGTGCGG
ATTCACCAAGCTGGACATATTTTCCGGGTCTGCAATTTATCCTCGCTGGC
GTCGTGGGCAAGACGGCGGCCTTCTTCGGCGTCCCCGCTATGCGCCTTGC
TCTGGATGTCTTGGTATACATAGGGGTTGTGTCCGTGTTCGTGCTGAAGA
TGTTGGTGCTGAAAAATGCCGGCAGACTGTCGCCATGGGACTTCCTGTGG
ATGGTGTACCTGGTCGGAGCAATATGGAAACAGGTGCACGAGGTGCAGGA
GGCAGGATCAATCCGCGTGCACCTCATGAACCCCTGGAACGTGGTTGAGG
CCACTTCCCTGGCCTCCCTATCCGCGGCCTTCTTCTTCCGGATGTGGGCA
TACACGTGCAACGGCAACGGCGAGTTCTTTTGCGGCGAGGTTTTGAGCTC
GTCGGTGAACGAGCTCAACGAGGTGTACCTGGCGCAATACTTCCAGGCGG
CCTCCGCACCGTTCGTACTCGGCAGAGTCCTCTTTCTCACGCAGGTGTGA
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